BAC Information

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BAC

Clone NameB6Ng01-258K13
Chromosome10 (Build37)
Map Location 94,673,710 - 94,787,544
singlet/doubletdoublet
Overlap geneCradd
Upstream geneNdufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1
Downstream geneSocs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119, Eea1, EG432491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258K13.bB6Ng01-258K13.g
ACCGA064042GA064043
length1,1151,114
definitionB6Ng01-258K13.b B6Ng01-258K13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,786,420 - 94,787,544)(94,673,710 - 94,674,827)
sequence
gaattcctaccacttacataaaaacactgtcagtaagacagctagtgcct
gcatagaaaccctggagtatattagcattgtaagtttgcacatacagttg
aaaggtgttgaggaaggagatttataagtgtctactgatatgtttataga
tattttattttcaactggaggtactggtagaaatattctttttctattgt
caaaaaatttttttagcacacacatcctttttgttacatgtcacccaact
aattaatgagtttattaattgttttattttatgaagtaatttgtgcatgt
aggtgtatattactgggagttgaactcagggcttaactgctagattaact
tttgactagcttattatagtcaggctctcatggagttttttctgttaaga
ttcaacaattcatttactctttcacttagataacgtagatcacctgttct
caacctgtggctctgtaacaaccctttcacagtggcagtgtaagacttat
cagaaaacacagatgtttacactaggatttataacatagcaaaattagtt
atgaagtagcaacaaaaataattttatggttgggggacaccatattacaa
ggtcaaagcattaggaagattgagaactactgccttagagtttttaaacc
actctctctcttttttaatgtaggagagtgtgcctcttttcccacagcaa
acatggcggaacaaacttcaacctgacgtcttgcgccctcaacaaagatg
gctacagcacttcctgctcttgcctttaacaaagatggtcgcaatacttc
ctgtctaggacttttgccctcaacaaagatggtctttatggtacaggttc
cctagcagtctggattccggttgtagttttagttattctttttttttttt
tttttaaacggtacgtggtcgcagacgtaagtaagatgactccatcttct
ctcgctgtccccgcgccgtggcgacatcgccctgcgcgctctcccggggc
tggactgggttcgggtggcggtgccggggtcggtttcctcgaaaggacag
tctgcgctccattaccgtgaatcgtcgtagctctaactggtgcacaccca
cgggctttcagctgc
gaattcatcagagtcctaagccattcgttctgtgaacccttgagagcagg
ggcttaccaccaccatacagcacacagagagcatcctgtgataaggaaag
accaagcacaccccatgggcaagctgggggagagctgcgcctagggccct
ctccttcagcccagtgggttcctaactgttggatctctcccatctcctcc
ttcccctgactgggccatgcggttatattttccaactgttttgtttggtg
tgaattagaggaatgacactctaattgcgagatgaagcagctagccacat
ttcaacagtagaggaggaggaggatttagaaggaaacgaaatcttaactg
tgctgcttgcccaagggcctgaccacagtattagtggctagtcctgatga
ggtggccacccagggctaaacagcgttgtcctccagagacgtgggggatg
ctttagttcctctggaactcacatcatctgtgtgcacatgccagagcgct
gagggggggacttaaagctctgagatgggcctggcagtgtgattccgacc
tccagatatctggaatcaaccagtaaggcttgctgttgtctctacatcac
agataaacttcaaacatctccgcatcacagataaacttcaaacatttttt
taaaagtatcttatgtgagtggaataccattttctattgctgccataact
atcagccacagacagccccaaagaatacgattttattatttgacagtcct
gtgggtcaaaaacctgacatgagactcgctgagtcagctaagtcatcagc
tgatggtgttccttttaggctctatggagattccctgggcttgttctttt
ctggcctctggagactgcctgtgtccctgggttcagggccccttccaagt
gggcgataccgagttgaaattttcctatcacatctctgtgactcgccttc
tgcttccctctccggcttttccttgtgatgcgttcgagtacatccgggat
gacccgggacattctcatagcacagcattgccctcaactattatctgcgt
gttatgctatacggtatggttaacggctctgctgattaggacagacatct
tttaaggccaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94786420_94787544
seq2: B6Ng01-258K13.b_47_1161 (reverse)

seq1  GCAGCTGAAAG-CCGTGGTTGTGGCACAGTTAGAGCTACCGACGATTTTC  49
      ||||||||||| |||||| ||||   |||||||||||| ||||||  |||
seq2  GCAGCTGAAAGCCCGTGGGTGTGCACCAGTTAGAGCTA-CGACGA--TTC  47

seq1  ACGGTAAATGAAGCCGCAGACTGTCCTCTCGGAGGAAACCGACCCCCGGC  99
      ||||| |||| || ||||||||||||| || ||||||||||| |||||||
seq2  ACGGT-AATGGAG-CGCAGACTGTCCTTTC-GAGGAAACCGA-CCCCGGC  93

seq1  ACCGCCACCCGAACCCCGGTCCAGCCCCCGGGAGAGCCGCGCAGGGGCGA  149
      ||||||||||||| ||| |||||| ||||||||||| |||||| ||||||
seq2  ACCGCCACCCGAA-CCCAGTCCAG-CCCCGGGAGAG-CGCGCA-GGGCGA  139

seq1  TGTCGCCACGGCGCGGGGACAGCGAGAGAAGATGGAGTCATCTTACTTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCCACGGCGCGGGGACAGCGAGAGAAGATGGAGTCATCTTACTTAC  189

seq1  GTCTGCGACCACGTACCGTTTAAAAAAAAAAAAAAAAAGAATAACTAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCGACCACGTACCGTTTAAAAAAAAAAAAAAAAAGAATAACTAAAA  239

seq1  CTACAACCGGAATCCAGACTGCTAGGGAACCTGTACCATAAAGACCATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACCGGAATCCAGACTGCTAGGGAACCTGTACCATAAAGACCATCT  289

seq1  TTGTTGAGGGCAAAAGTCCTAGACAGGAAGTATTGCGACCATCTTTGTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAGGGCAAAAGTCCTAGACAGGAAGTATTGCGACCATCTTTGTTA  339

seq1  AAGGCAAGAGCAGGAAGTGCTGTAGCCATCTTTGTTGAGGGCGCAAGACG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGAGCAGGAAGTGCTGTAGCCATCTTTGTTGAGGGCGCAAGACG  389

seq1  TCAGGTTGAAGTTTGTTCCGCCATGTTTGCTGTGGGAAAAGAGGCACACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTGAAGTTTGTTCCGCCATGTTTGCTGTGGGAAAAGAGGCACACT  439

seq1  CTCCTACATTAAAAAAGAGAGAGAGTGGTTTAAAAACTCTAAGGCAGTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACATTAAAAAAGAGAGAGAGTGGTTTAAAAACTCTAAGGCAGTAG  489

seq1  TTCTCAATCTTCCTAATGCTTTGACCTTGTAATATGGTGTCCCCCAACCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATCTTCCTAATGCTTTGACCTTGTAATATGGTGTCCCCCAACCA  539

seq1  TAAAATTATTTTTGTTGCTACTTCATAACTAATTTTGCTATGTTATAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATTTTTGTTGCTACTTCATAACTAATTTTGCTATGTTATAAAT  589

seq1  CCTAGTGTAAACATCTGTGTTTTCTGATAAGTCTTACACTGCCACTGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGTAAACATCTGTGTTTTCTGATAAGTCTTACACTGCCACTGTGA  639

seq1  AAGGGTTGTTACAGAGCCACAGGTTGAGAACAGGTGATCTACGTTATCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGTTACAGAGCCACAGGTTGAGAACAGGTGATCTACGTTATCTA  689

seq1  AGTGAAAGAGTAAATGAATTGTTGAATCTTAACAGAAAAAACTCCATGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGAGTAAATGAATTGTTGAATCTTAACAGAAAAAACTCCATGAG  739

seq1  AGCCTGACTATAATAAGCTAGTCAAAAGTTAATCTAGCAGTTAAGCCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGACTATAATAAGCTAGTCAAAAGTTAATCTAGCAGTTAAGCCCTG  789

seq1  AGTTCAACTCCCAGTAATATACACCTACATGCACAAATTACTTCATAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAACTCCCAGTAATATACACCTACATGCACAAATTACTTCATAAAA  839

seq1  TAAAACAATTAATAAACTCATTAATTAGTTGGGTGACATGTAACAAAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATTAATAAACTCATTAATTAGTTGGGTGACATGTAACAAAAAG  889

seq1  GATGTGTGTGCTAAAAAAATTTTTTGACAATAGAAAAAGAATATTTCTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTGTGCTAAAAAAATTTTTTGACAATAGAAAAAGAATATTTCTAC  939

seq1  CAGTACCTCCAGTTGAAAATAAAATATCTATAAACATATCAGTAGACACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCTCCAGTTGAAAATAAAATATCTATAAACATATCAGTAGACACT  989

seq1  TATAAATCTCCTTCCTCAACACCTTTCAACTGTATGTGCAAACTTACAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATCTCCTTCCTCAACACCTTTCAACTGTATGTGCAAACTTACAAT  1039

seq1  GCTAATATACTCCAGGGTTTCTATGCAGGCACTAGCTGTCTTACTGACAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATACTCCAGGGTTTCTATGCAGGCACTAGCTGTCTTACTGACAG  1089

seq1  TGTTTTTATGTAAGTGGTAGGAATTC  1125
      ||||||||||||||||||||||||||
seq2  TGTTTTTATGTAAGTGGTAGGAATTC  1115

seq1: chr10_94673710_94674827
seq2: B6Ng01-258K13.g_68_1181

seq1  GAATTCATCAGAGTCCTAAGCCATTCGTTCTGTGAACCCTTGAGAGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGAGTCCTAAGCCATTCGTTCTGTGAACCCTTGAGAGCAGG  50

seq1  GGCTTACCACCACCATACAGCACACAGAGAGCATCCTGTGATAAGGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACCACCACCATACAGCACACAGAGAGCATCCTGTGATAAGGAAAG  100

seq1  ACCAAGCACACCCCATGGGCAAGCTGGGGGAGAGCTGCGCCTAGGGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCACACCCCATGGGCAAGCTGGGGGAGAGCTGCGCCTAGGGCCCT  150

seq1  CTCCTTCAGCCCAGTGGGTTCCTAACTGTTGGATCTCTCCCATCTCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCAGCCCAGTGGGTTCCTAACTGTTGGATCTCTCCCATCTCCTCC  200

seq1  TTCCCCTGACTGGGCCATGCGGTTATATTTTCCAACTGTTTTGTTTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGACTGGGCCATGCGGTTATATTTTCCAACTGTTTTGTTTGGTG  250

seq1  TGAATTAGAGGAATGACACTCTAATTGCGAGATGAAGCAGCTAGCCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGAGGAATGACACTCTAATTGCGAGATGAAGCAGCTAGCCACAT  300

seq1  TTCAACAGTAGAGGAGGAGGAGGATTTAGAAGGAAACGAAATCTTAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAGTAGAGGAGGAGGAGGATTTAGAAGGAAACGAAATCTTAACTG  350

seq1  TGCTGCTTGCCCAAGGGCCTGACCACAGTATTAGTGGCTAGTCCTGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTGCCCAAGGGCCTGACCACAGTATTAGTGGCTAGTCCTGATGA  400

seq1  GGTGGCCACCCAGGGCTAAACAGCGTTGTCCTCCAGAGACGTGGGGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCACCCAGGGCTAAACAGCGTTGTCCTCCAGAGACGTGGGGGATG  450

seq1  CTTTAGTTCCTCTGGAACTCACATCATCTGTGTGCACATGCCAGAGCGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTCCTCTGGAACTCACATCATCTGTGTGCACATGCCAGAGCGCT  500

seq1  GAGGGGGGGACTTAAAGCTCTGAGATGGGCCTGGCAGTGTGATTCCGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGGGACTTAAAGCTCTGAGATGGGCCTGGCAGTGTGATTCCGACC  550

seq1  TCCAGATATCTGGAATCAACCAGTAAGGCTTGCTGTTGTCTCTACATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATATCTGGAATCAACCAGTAAGGCTTGCTGTTGTCTCTACATCAC  600

seq1  AGATAAACTTCAAACATCTCCGCATCACAGATAAACTTCAAACATTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACTTCAAACATCTCCGCATCACAGATAAACTTCAAACATTTTTT  650

seq1  TAAAAGTATCTTATGTGAGTGGAATACCATTTTCTATTGCTGCCATAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATCTTATGTGAGTGGAATACCATTTTCTATTGCTGCCATAACT  700

seq1  ATCAGCCACAGACAGCCCCAAAGAATACGATTTTATTATTTGACAGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCACAGACAGCCCCAAAGAATACGATTTTATTATTTGACAGTCCT  750

seq1  GTGGGTCAAAAACCTGACATGAGACTCGCTGAGTCAGCTAAGTCATCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCAAAAACCTGACATGAGACTCGCTGAGTCAGCTAAGTCATCAGC  800

seq1  TGATGGTGTTCCTTTTAGGCTCTATGGAGATTCCCTGGGCTTGTTCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTGTTCCTTTTAGGCTCTATGGAGATTCCCTGGGCTTGTTCTTTT  850

seq1  CTGGCCTCTGGAGACTGCCTGTGTCCCTGGGTTCAGGGCCCCTTCCAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTGGAGACTGCCTGTGTCCCTGGGTTCAGGGCCCCTTCCAAGT  900

seq1  GGGCGATACCGAGTTG-AATTTTCCTATCACATCTCTGTGACTCGCCTTC  949
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGGCGATACCGAGTTGAAATTTTCCTATCACATCTCTGTGACTCGCCTTC  950

seq1  TGCTTCCCTCTCCGGCTTTTCCTTGTGATGCGTTCGAGTACATCC-GGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCTTCCCTCTCCGGCTTTTCCTTGTGATGCGTTCGAGTACATCCGGGAT  1000

seq1  GACCCGGGACAATCTTCCATAGCAACAGCAATGCCCTCAACTA-TATCTG  1047
      ||||||||||| |||  |||||| |||||| |||||||||||| ||||||
seq2  GACCCGGGACATTCT--CATAGC-ACAGCATTGCCCTCAACTATTATCTG  1047

seq1  CGTGTTATGCTAATACGGTATGGGTTTAACGGCTCTGCTGATTAAGGGAC  1097
      ||||||||||| |||||||||||  |||||||||||||||||||  ||||
seq2  CGTGTTATGCT-ATACGGTATGG--TTAACGGCTCTGCTGATTA--GGAC  1092

seq1  AGACATC-TTTAAGGCGAGGCC  1118
      ||||||| |||||||| |||||
seq2  AGACATCTTTTAAGGCCAGGCC  1114