BAC Information

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BAC

Clone NameB6Ng01-258M22
Chromosome10 (Build37)2 (Build37)
Map Location 15,712,107 - 15,712,7989,672,026 - 9,672,360
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258M22.bB6Ng01-258M22.g
ACCGA064150GA064151
length692920
definitionB6Ng01-258M22.b B6Ng01-258M22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,712,107 - 15,712,798)(9,672,026 - 9,672,360)
sequence
gaattcataacttcaagtatggcatatggcttcatttttgttttcatact
ctgatatttattatttttatgaaataacataaaggcttccacagagtatg
ctgtgtctcagcatactaaaatttgttatacagatactaatatccgttta
cattatatcaacaagattgttattacacaatatgaacactggtactcaat
ataactttcctacatagactctcaccttagctggtcattgacttaaataa
tttacccattttaagaacattgttacggatcaagtaaacaaaaatctcta
gaaattaatacataggagcacattcctgaattaccaggattaggaggact
gaaccataagggttccaaggccagccagggctattaaagaaggggtataa
caaaacctacacaaaaatagtgttcattttctttaatgtaaaacaatgga
gaagactaaggccaaattgtcctactaaggcacaatgtttgttcaggatt
aatactggtatgaaggtactgggaaccatgggtatttcaatacttaagag
ctctaagatatatattttggaccattgagtctaatttactcatgcttact
ggttcatctgtatggtgaattgaagcactgtttacttttgtatgcgcgtg
cgcgcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcctggccattgagtcctggaaagcacccttactccagtgtgcaac
actagggttatgtggaacctgggttcatggcaggatttttatgtattaga
actcaaatcaggagttcatacttgcgtagaaagcactctgacccactgaa
acttttgctcttccaataaaatttacaatttcgaataagttgaattcaac
aaggtgagagaatactgatgctagttatatgttgttaaaagaaacattga
cttcaaaatattactttcacaatataattctcaaataatgcctgtaagaa
tgataattttccctgtttatttataatgtatttattatatgttcctcatg
tgtctgtattattttgaattcaaaaactttattacaacttttcaaactat
gggtatcattattataaaaataataaacaatgtaaagaagttaagtatct
tctaattaccccatagccttaattcctgttgttgataggacagacaaagt
atcttagaacaagaacagacagatttaggggaaaaaaaaactgtagtagt
aaaataaataaatcctggaggctgtgtgttccttgctatgtgccccaata
ttttggattctggaatgaaacacacacacacacacacacacacacataaa
cactttatattttgatatgtcttaattggctcaatgtctgggccacttcc
taacctccatgtggttaatccacccccaccaataatcttgaattattact
tactaaatcttgcattctatcttggttgttctggacccagagtgatccct
agctgggccacactctcctggctccttcacatgtccactatgcccttcct
gtcctatactcaggaacaacagatctcctctgccaaatctccttcccttt
tcctccctctctatccctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15712107_15712798
seq2: B6Ng01-258M22.b_47_738

seq1  GAATTCATAACTTCAAGTATGGCATATGGCTTCATTTTTGTTTTCATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACTTCAAGTATGGCATATGGCTTCATTTTTGTTTTCATACT  50

seq1  CTGATATTTATTATTTTTATGAAATAACATAAAGGCTTCCACAGAGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATTTATTATTTTTATGAAATAACATAAAGGCTTCCACAGAGTATG  100

seq1  CTGTGTCTCAGCATACTAAAATTTGTTATACAGATACTAATATCCGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTCAGCATACTAAAATTTGTTATACAGATACTAATATCCGTTTA  150

seq1  CATTATATCAACAAGATTGTTATTACACAATATGAACACTGGTACTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATCAACAAGATTGTTATTACACAATATGAACACTGGTACTCAAT  200

seq1  ATAACTTTCCTACATAGACTCTCACCTTAGCTGGTCATTGACTTAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTCCTACATAGACTCTCACCTTAGCTGGTCATTGACTTAAATAA  250

seq1  TTTACCCATTTTAAGAACATTGTTACGGATCAAGTAAACAAAAATCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCATTTTAAGAACATTGTTACGGATCAAGTAAACAAAAATCTCTA  300

seq1  GAAATTAATACATAGGAGCACATTCCTGAATTACCAGGATTAGGAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAATACATAGGAGCACATTCCTGAATTACCAGGATTAGGAGGACT  350

seq1  GAACCATAAGGGTTCCAAGGCCAGCCAGGGCTATTAAAGAAGGGGTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATAAGGGTTCCAAGGCCAGCCAGGGCTATTAAAGAAGGGGTATAA  400

seq1  CAAAACCTACACAAAAATAGTGTTCATTTTCTTTAATGTAAAACAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTACACAAAAATAGTGTTCATTTTCTTTAATGTAAAACAATGGA  450

seq1  GAAGACTAAGGCCAAATTGTCCTACTAAGGCACAATGTTTGTTCAGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTAAGGCCAAATTGTCCTACTAAGGCACAATGTTTGTTCAGGATT  500

seq1  AATACTGGTATGAAGGTACTGGGAACCATGGGTATTTCAATACTTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGGTATGAAGGTACTGGGAACCATGGGTATTTCAATACTTAAGAG  550

seq1  CTCTAAGATATATATTTTGGACCATTGAGTCTAATTTACTCATGCTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGATATATATTTTGGACCATTGAGTCTAATTTACTCATGCTTACT  600

seq1  GGTTCATCTGTATGGTGAATTGAAGCACTGTTTACTTTTGTATGCGCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATCTGTATGGTGAATTGAAGCACTGTTTACTTTTGTATGCGCGTG  650

seq1  CGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  692

seq1: chr2_9672026_9672360
seq2: B6Ng01-258M22.g_318_714

seq1  ACTTCAAAATATTACTCCC-------CATTGTTGCATAAAACC---ACGA  40
      ||||||||||||||||  |        ||| |   ||||  ||   | ||
seq2  ACTTCAAAATATTACTTTCACAATATAATTCTCAAATAATGCCTGTAAGA  50

seq1  TTG---GTTTGCCATGATTGTTCAT---------------TTTGCCTTTC  72
       ||    ||| || || || || ||               | | |||   
seq2  ATGATAATTTTCCCTGTTTATTTATAATGTATTTATTATATGTTCCTCAT  100

seq1  GAG--------ATTCTTAACTC----CCTATCTAAAAGCT----CAGCTG  106
      | |        ||| | || ||     || | | | | ||     | || 
seq2  GTGTCTGTATTATTTTGAATTCAAAAACTTTATTACAACTTTTCAAACTA  150

seq1  TGTCTTTCATTCACAAATCAATGTTCAGCA----AAAGTCCTTAAGAGAC  152
      ||  | |||||   | |  |||  | | ||    ||||   |||||  | 
seq2  TGGGTATCATTATTATAAAAATAATAAACAATGTAAAGAAGTTAAG-TAT  199

seq1  CCTCCCCCTCCTCCA---ACCGAATGCAAG--CTTGAGATGTGCTTCAAG  197
      | ||    | | |||    |  ||| |  |   |||| | |     ||| 
seq2  CTTCTAATTACCCCATAGCCTTAATTCCTGTTGTTGATAGGACAGACAA-  248

seq1  GGAAACTTGCATAATAAGTAAAACAAGGACTGCATTCCTCAGGTGGGGAA  247
       | | |||  | || |||   ||||  ||| |  ||    ||| ||  ||
seq2  AGTATCTT--AGAACAAG---AACA--GACAGATTT----AGG-GGAAAA  286

seq1  GAGATCCATGGGAGAGCATATGCAGAAACCCCGG----------------  281
       | | |  | | ||   | ||  | ||| || ||                
seq2  AAAAACTGTAGTAG-TAAAATAAATAAATCCTGGAGGCTGTGTGTTCCTT  335

seq1  --TATG-----CAA-GTTCTAGTGTAAGCATGCAAACACACACACACACA  323
        ||||     |||  || | |  |  | |   |||||||||||||||||
seq2  GCTATGTGCCCCAATATTTTGGATTCTGGAATGAAACACACACACACACA  385

seq1  CACACACACACA  335
      ||||||||||||
seq2  CACACACACACA  397