BAC Information

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BAC

Clone NameB6Ng01-258N05
Chromosome10 (Build37)
Map Location 46,561,003 - 46,732,415
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC664781
Downstream geneLOC100041632, LOC668252, LOC100042387, LOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258N05.bB6Ng01-258N05.g
ACCGA064164GA064165
length1,1271,135
definitionB6Ng01-258N05.b B6Ng01-258N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,731,276 - 46,732,415)(46,561,003 - 46,562,146)
sequence
gaattcattttgccactggactcacctttgaaagcaatctctattgcatc
attaatttaatcatttaaattgtgtgattccagacattgctatgtaaaat
atacagtgaaagtccaaggttcagaacatgcctttaggcttgacagaaag
ccatatgaacttcatttggctaagtaaatgaggtagaatttatcataatt
ctattctctttttttttatatcctcattttaaaaatacattctttaatct
ttttttacagtctggactttattcgcctccagatcaaccctctgactgtt
ccacatcccatacctccttcccccacctccaagtggatgtccctactccc
tcacccaacatcaaaagacagccccacttccttgggcctcaagtctcctg
aaggttaagtacatcttctcttactgagtccagatcccacagacctctgc
tgtcaggggcctcatatcagctgttgtatgctgcctgatggtggctcagt
gtctgagagatcttggggtgtacaggttagttgagactgctggtcttcca
atagtgtcatcctcttcctctgttctacttttaaacctcaagatcatttt
gtctttttgctcctctcacatatggcggtcctctctgttgagaaacatcc
agatcagcttagagggataactacaaaattaatctacagatgtgtgaaca
tagttgaataacagatacccagtgggtcattaaactcaactagttaccag
aggcaatagaagcagactatacactaacttatatagagataaccccccca
aaaaaacaataacaacaaacagagaaaagctgaatcatatagcaaacaat
cataactcaaaatgttagccaatgaggagaagcaatggcaacctgatatt
cataattagtaaaagaagttgaaatataaaattgggaaataaaatggtga
ctcaaatatagccaaattcagatggatattataaaaggaagatgaaagca
aaccatcaagatgctgaggagtgataataagtaagcaatgctgattatct
acagctaagcagaagatgcatgctcatgtcagtaaagctacatgggaaat
caagatctcctcagatgttaaagaaaa

gaattcagtacgttcatctttctctgtaaaactgcatagagatttttaaa
aaatttgtccagaattgaaaaatagaagaatgatatcactctttgaaact
tagaattaagagtgccttgaccttgtagttctgctggggaggctggctct
gccctcatgtatattttatgtgctgtgggaagtcacagtactttgaatat
taaccatttgtacttgtgttcacaaaatgaagaagaaaaaacatcttcat
aagtgtatcaaaatgactaatgcttgatttgtgagatgagatagttcctc
ctctgacctgcaatttctcaaatgagatttttctcctagttagtaacttg
aataccttgagtcccaaatatttttatatgacacattaaggtgatgaggg
atattagggacagtctttctcttctttgttttctaagttgagtgttcacc
tttcacttcaagaatctactacatatattcattgtgtggaaagactagat
gtgagtttttatattttcttgaacttgtttccagaaatcttttcttagag
caattacagcaccaagtcagaaagacagatatatttttagcaccaactca
ttgttctcagagctgagcactgactctcagttattgaactgtggcttaac
aggcatgatattgtgcttggtccttgaagttttagattccttgtattcaa
agttttaactgtagttgacaaatgtgaaaatcttccttaaatttatcttt
attgaatgactaaggttattcatctttctccattgtttcaaaaataggcc
agtaacatcttccagatcttcagtctgtgggcaaacatttctctctgaca
ataagcataagatttactacatattttattatagacacaggatagtataa
ataatttgtattttactcttctttatataactgaccatattatgtctgat
gtaagtcttctctgaaatttagtacagatgttcatttaacatagcctaat
caattatattgccttcttcataaaaataattggttgcaactcaatctaca
agaatatagtcattttttgttataggtacttgcttgcattatatgtgctg
gacataggtgaaaatctgccctagggctaataaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_46731276_46732415
seq2: B6Ng01-258N05.b_49_1175 (reverse)

seq1  TTTTCTTTTTACATCTTGAGAGATCTTGATCTCCCCATGTAGCTTTTACT  50
      ||||| ||| ||||||   ||||||||||| | |||||||||| ||||||
seq2  TTTTC-TTTAACATCTGAGGAGATCTTGAT-TTCCCATGTAGC-TTTACT  47

seq1  GACATGAGCCATGCAATCCTCCTGCCTTAGCCTGTAGATAATCAGCATTG  100
      |||||||| ||||||   || ||| ||||| |||||||||||||||||||
seq2  GACATGAG-CATGCA--TCTTCTG-CTTAG-CTGTAGATAATCAGCATTG  92

seq1  CTTACTTA-TATCACCTCCTTCAGCCATCCTTGATGGTTTTGCTTTCATC  149
      |||||||| ||||| |||| |||| ||| |||||||| ||||||||||||
seq2  CTTACTTATTATCA-CTCC-TCAG-CAT-CTTGATGG-TTTGCTTTCATC  137

seq1  TTCCTTTTTATAATATCCATTCTGAATTTGGCTATATTTGAGTCACCATT  199
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCC-TTTTATAATATCCA-TCTGAATTTGGCTATATTTGAGTCACCATT  185

seq1  TTATTT-CCAATTTTATATTTCAACTTCTTTTACTAATTATGAATATCAG  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCCAATTTTATATTTCAACTTCTTTTACTAATTATGAATATCAG  235

seq1  GTTGCCATTGCTTCTCCTCATTGGCTAACATTTTGAGTTATGATTGTTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCATTGCTTCTCCTCATTGGCTAACATTTTGAGTTATGATTGTTTG  285

seq1  CTATATGATTCAGCTTTTCTCTGTTTGTTGTTATTGTTTTTTTGGGGGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGATTCAGCTTTTCTCTGTTTGTTGTTATTGTTTTTTTGGGGGGG  335

seq1  TTATCTCTATATAAGTTAGTGTATAGTCTGCTTCTATTGCCTCTGGTAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTATATAAGTTAGTGTATAGTCTGCTTCTATTGCCTCTGGTAAC  385

seq1  TAGTTGAGTTTAATGACCCACTGGGTATCTGTTATTCAACTATGTTCACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGAGTTTAATGACCCACTGGGTATCTGTTATTCAACTATGTTCACA  435

seq1  CATCTGTAGATTAATTTTGTAGTTATCCCTCTAAGCTGATCTGGATGTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTAGATTAATTTTGTAGTTATCCCTCTAAGCTGATCTGGATGTTT  485

seq1  CTCAACAGAGAGGACCGCCATATGTGAGAGGAGCAAAAAGACAAAATGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAGAGAGGACCGCCATATGTGAGAGGAGCAAAAAGACAAAATGAT  535

seq1  CTTGAGGTTTAAAAGTAGAACAGAGGAAGAGGATGACACTATTGGAAGAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTTTAAAAGTAGAACAGAGGAAGAGGATGACACTATTGGAAGAC  585

seq1  CAGCAGTCTCAACTAACCTGTACACCCCAAGATCTCTCAGACACTGAGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCTCAACTAACCTGTACACCCCAAGATCTCTCAGACACTGAGCC  635

seq1  ACCATCAGGCAGCATACAACAGCTGATATGAGGCCCCTGACAGCAGAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAGGCAGCATACAACAGCTGATATGAGGCCCCTGACAGCAGAGGT  685

seq1  CTGTGGGATCTGGACTCAGTAAGAGAAGATGTACTTAACCTTCAGGAGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGATCTGGACTCAGTAAGAGAAGATGTACTTAACCTTCAGGAGAC  735

seq1  TTGAGGCCCAAGGAAGTGGGGCTGTCTTTTGATGTTGGGTGAGGGAGTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCCAAGGAAGTGGGGCTGTCTTTTGATGTTGGGTGAGGGAGTAG  785

seq1  GGACATCCACTTGGAGGTGGGGGAAGGAGGTATGGGATGTGGAACAGTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCCACTTGGAGGTGGGGGAAGGAGGTATGGGATGTGGAACAGTCA  835

seq1  GAGGGTTGATCTGGAGGCGAATAAAGTCCAGACTGTAAAAAAAGATTAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTGATCTGGAGGCGAATAAAGTCCAGACTGTAAAAAAAGATTAAA  885

seq1  GAATGTATTTTTAAAATGAGGATATAAAAAAAAAGAGAATAGAATTATGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATTTTTAAAATGAGGATATAAAAAAAAAGAGAATAGAATTATGA  935

seq1  TAAATTCTACCTCATTTACTTAGCCAAATGAAGTTCATATGGCTTTCTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTACCTCATTTACTTAGCCAAATGAAGTTCATATGGCTTTCTGT  985

seq1  CAAGCCTAAAGGCATGTTCTGAACCTTGGACTTTCACTGTATATTTTACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTAAAGGCATGTTCTGAACCTTGGACTTTCACTGTATATTTTACA  1035

seq1  TAGCAATGTCTGGAATCACACAATTTAAATGATTAAATTAATGATGCAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGTCTGGAATCACACAATTTAAATGATTAAATTAATGATGCAAT  1085

seq1  AGAGATTGCTTTCAAAGGTGAGTCCAGTGGCAAAATGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGCTTTCAAAGGTGAGTCCAGTGGCAAAATGAATTC  1127


seq1: chr10_46561003_46562146
seq2: B6Ng01-258N05.g_68_1202

seq1  GAATTCAGTACGTTCATCTTTCTCTGTAAAACTGCATAGAGATTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACGTTCATCTTTCTCTGTAAAACTGCATAGAGATTTTTAAA  50

seq1  AAATTTGTCCAGAATTGAAAAATAGAAGAATGATATCACTCTTTGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTCCAGAATTGAAAAATAGAAGAATGATATCACTCTTTGAAACT  100

seq1  TAGAATTAAGAGTGCCTTGACCTTGTAGTTCTGCTGGGGAGGCTGGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTAAGAGTGCCTTGACCTTGTAGTTCTGCTGGGGAGGCTGGCTCT  150

seq1  GCCCTCATGTATATTTTATGTGCTGTGGGAAGTCACAGTACTTTGAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCATGTATATTTTATGTGCTGTGGGAAGTCACAGTACTTTGAATAT  200

seq1  TAACCATTTGTACTTGTGTTCACAAAATGAAGAAGAAAAAACATCTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATTTGTACTTGTGTTCACAAAATGAAGAAGAAAAAACATCTTCAT  250

seq1  AAGTGTATCAAAATGACTAATGCTTGATTTGTGAGATGAGATAGTTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATCAAAATGACTAATGCTTGATTTGTGAGATGAGATAGTTCCTC  300

seq1  CTCTGACCTGCAATTTCTCAAATGAGATTTTTCTCCTAGTTAGTAACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACCTGCAATTTCTCAAATGAGATTTTTCTCCTAGTTAGTAACTTG  350

seq1  AATACCTTGAGTCCCAAATATTTTTATATGACACATTAAGGTGATGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTGAGTCCCAAATATTTTTATATGACACATTAAGGTGATGAGGG  400

seq1  ATATTAGGGACAGTCTTTCTCTTCTTTGTTTTCTAAGTTGAGTGTTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGGGACAGTCTTTCTCTTCTTTGTTTTCTAAGTTGAGTGTTCACC  450

seq1  TTTCACTTCAAGAATCTACTACATATATTCATTGTGTGGAAAGACTAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTCAAGAATCTACTACATATATTCATTGTGTGGAAAGACTAGAT  500

seq1  GTGAGTTTTTATATTTTCTTGAACTTGTTTCCAGAAATCTTTTCTTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTTTATATTTTCTTGAACTTGTTTCCAGAAATCTTTTCTTAGAG  550

seq1  CAATTACAGCACCAAGTCAGAAAGACAGATATATTTTTAGCACCAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACAGCACCAAGTCAGAAAGACAGATATATTTTTAGCACCAACTCA  600

seq1  TTGTTCTCAGAGCTGAGCACTGACTCTCAGTTATTGAACTGTGGCTTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCAGAGCTGAGCACTGACTCTCAGTTATTGAACTGTGGCTTAAC  650

seq1  AGGCATGATATTGTGCTTGGTCCTTGAAGTTTTAGATTCCTTGTATTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGATATTGTGCTTGGTCCTTGAAGTTTTAGATTCCTTGTATTCAA  700

seq1  AGTTTTAACTGTAGTTGACAAATGTGAAAATCTTCCTTAAATTTATCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAACTGTAGTTGACAAATGTGAAAATCTTCCTTAAATTTATCTTT  750

seq1  ATTGAATGACTAAGGTTATTCATCTTTCTCCATTGTTTCAAAAATAGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGACTAAGGTTATTCATCTTTCTCCATTGTTTCAAAAATAGGCC  800

seq1  AGTAACATCTTCCAGATCTTCAGTCTGTGGGCAAACATTTCTCTCTGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATCTTCCAGATCTTCAGTCTGTGGGCAAACATTTCTCTCTGACA  850

seq1  ATAAGCATAAGATTTACTACATATTTTATTATAGACACAGGATAGTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATAAGATTTACTACATATTTTATTATAGACACAGGATAGTATAA  900

seq1  ATAATTTGTATTTTACTCTTCTTTATATAACTGACCATATTATGTCTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGTATTTTACTCTTCTTTATATAACTGACCATATTATGTCTGAT  950

seq1  GTAAGTCTTCTCTGAAATTTTAGTACAGATGTTCATTTAACATAGCCTAA  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTAAGTCTTCTCTGAAA-TTTAGTACAGATGTTCATTTAACATAGCCTAA  999

seq1  TCAAATTATAATTGCCCTTTCTTTCATAAAATAATTTGGTTGCAAACTCA  1050
      || |||||| ||||||  ||| |||||||||  | |||||||| ||||| 
seq2  TC-AATTAT-ATTGCC--TTC-TTCATAAAAATAATTGGTTGC-AACTC-  1042

seq1  AATCTACAAGAATATAGTCA-TTTTTGTTATAAGTAC-TGGTTGCATTTA  1098
      |||||||||||||||||||| ||||||||||| |||| || ||||| |||
seq2  AATCTACAAGAATATAGTCATTTTTTGTTATAGGTACTTGCTTGCA-TTA  1091

seq1  TATGTGCTTGACATAGGTTGAAAAATCTG-CCTAGGGGTAATTAAGA  1144
      |||||||| |||||||||   |||||||| ||||||| ||| |||||
seq2  TATGTGCTGGACATAGGT--GAAAATCTGCCCTAGGGCTAA-TAAGA  1135


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