BAC Information

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BAC

Clone NameB6Ng01-258O04
Chromosome10 (Build37)
Map Location 23,920,809 - 23,921,917
singlet/doubletsinglet
Overlap genenone
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7
Downstream geneMoxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258O04.bB6Ng01-258O04.g
ACCGA064208GA064209
length1,2051,103
definitionB6Ng01-258O04.b B6Ng01-258O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctgtcaaatgtagattctccacagatacttaaaagaacagcc
aagttacactcatacaagaatttatcaaggcctaggaaatgggggttgtg
gtattgtgttattcatgagaaggtctgctagagcagaaccccctggtgct
agctttcacaaggctcaaaggagtagcacaaattgtgtctagggagtgaa
atccttacctgtcattagctgaccctaagcagagctgttttatctttact
gtaaatattacctggttcctgtaagtcctttgaagtcattcctttgtttt
gtgtcagctaacttcaatgtactttgcctgctgtgacatcctaccccctt
tattgtctgtattatataagactggtgttcactttgtgacaatacattca
gattctacacaatctcctgtgttgcgtctgtctgtcatttattcaccgat
tccttgtccatctgcaaccagagacccgttctacgcagacaagggaccaa
gagggtctgtggcacttcagtcttttccctcacccaatattagatcaggt
ttccctcctgattccccccttcattttccctcccaggtccctccctcgct
ccccacttgtgactgctttcttctctttcccaagtgggactgacttgggc
acttcagcttgttgaacttttaaaattctgtggactgtatcttgggtatt
ttgtactttggggggtggtgctaatatctacttattagtaagtacacatc
atgcaggtccttttgggtctgagttacctgactcagatgatattttctag
ttccatccatttgactgcaaaactcagatgtcctcattctttattgctga
gtagtattccattgtataaatgaatcacattttctgtatccattcttctg
tcctgggacatctagattgtttccagcttctggatatcacaaataagctg
ctatgaacatggtggaacatgtgcccctgtgacatggtagacatcttttg
ggtatagtcccagagtggtattgctcgtctcagtagatcttatttccaat
tttctgagacttcagattgattcagactggcttgtaccaggtttgcatcc
cagcagcattggaggggtttcctctttcctcccaatctttcgacttgttg
tactgagtttgacttagcattcgaatggggtagagggtgtaatcctacag
gtctg
gaattcatcgtaactgtattcctttatgcattcagctgttggcaaacagc
tacatcattcccataccttaggtcttatgaattgctgccatctttccccc
cataattttgttatttttttattctcattacatcccaattgcagcccctc
ccttctctcctcccagtcccacccttataaaatccttcctctcattgcac
cctcctcttctccttagagaacagaacccaccttgggtaacaccctaccc
taggatacccagcagaactgagcactcctctcccactgaggagtgcagtc
caaccaggcagtccaggaaatggaagatccaacgacacattggatcttta
ttggagcagagactatcactggtccaataaaccccttgcaaaagttgtta
cactgtcattttaagggagatgatggactcttgtgatccatgaagactca
agcatgagacaggtgttaacacttgaatgtcctcaaaatgtacagatgga
accggaaatgagcatagaccttgtttctgtcttacaggagagcagtagga
gcagtgtggcctcaggcagagagcatgaaaggcaatgtgtttgggggaag
tagggagtggaaaagctcaacgcatctcatcttctcatctcaggaatcaa
attaagggctgctctaggtattcaaagagaggtggagaaatctgatctgt
aaccagccgcttagttccccaagtcacggatgtttgctggatgtgagccc
gcagacagcagatcttagtgaaggagaatctgcacttgtactttgcggtg
ggtggtacccctagtggaagctcacctactgcaacagtatgcaccctcac
acctggacatatgtattgattgcttcttttgtttcaggtaaggtcttatt
gtgtaacttgcttatcatgtagctcagctaacttcaacttgctggaatct
tcctgcttcagcttcccaattgctggatgggatacaggcatgcaacactg
gcattatcctgatttttttatgcttttttattattttcatgtcctaaaat
gtaattgatacatgtgaaaattcaccactagaggattctttctgatatct
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23920809_23921917
seq2: B6Ng01-258O04.g_67_1169 (reverse)

seq1  AATAGATTATCAGGAAGAAACCTCTAGTGTTGATTTTTCACATGTATCAT  50
      |||||| |||||| ||||| ||||||||| ||| ||||||||||||||| 
seq2  AATAGA-TATCAGAAAGAATCCTCTAGTGGTGAATTTTCACATGTATCAA  49

seq1  TTACATTTTAGGGACATGAAAAATTAAT-AAAAAGCATTAAAAAAATCAA  99
      |||||||||| |||||||||||  |||| |||||||| ||||||||||| 
seq2  TTACATTTTA-GGACATGAAAA--TAATAAAAAAGCA-TAAAAAAATCAG  95

seq1  GATAATGCCAGTGTTGCATGCCTGTATCCCATCCAGCAATTGGGAAGCTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGCCAGTGTTGCATGCCTGTATCCCATCCAGCAATTGGGAAGCTG  145

seq1  AAGCAGGAAGATTCCAGCAAGTTTGAAGTTAGCCTGAGCTACATGATAAG  199
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  AAGCAGGAAGATTCCAGCAAG-TTGAAGTTAG-CTGAGCTACATGATAAG  193

seq1  CAAGTTACACAATAAGACCTTACCTGAAACAAAAGAAGCAATCAATACAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTACACAATAAGACCTTACCTGAAACAAAAGAAGCAATCAATACAT  243

seq1  ATGTCCAGGTGTGAGGGTGCATACTGTTGCAGTAGGTGAGCTTCCACTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAGGTGTGAGGGTGCATACTGTTGCAGTAGGTGAGCTTCCACTAG  293

seq1  GGGTACCACCCACCGCAAAGTACAAGTGCAGATTCTCCTTCACTAAGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACCACCCACCGCAAAGTACAAGTGCAGATTCTCCTTCACTAAGATC  343

seq1  TGCTGTCTGCGGGCTCACATCCAGCAAACATCCGTGACTTGGGGAACTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTGCGGGCTCACATCCAGCAAACATCCGTGACTTGGGGAACTAA  393

seq1  GCGGCTGGTTACAGATCAGATTTCTCCACCTCTCTTTGAATACCTAGAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTGGTTACAGATCAGATTTCTCCACCTCTCTTTGAATACCTAGAGC  443

seq1  AGCCCTTAATTTGATTCCTGAGATGAGAAGATGAGATGCGTTGAGCTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTAATTTGATTCCTGAGATGAGAAGATGAGATGCGTTGAGCTTTT  493

seq1  CCACTCCCTACTTCCCCCAAACACATTGCCTTTCATGCTCTCTGCCTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCTACTTCCCCCAAACACATTGCCTTTCATGCTCTCTGCCTGAG  543

seq1  GCCACACTGCTCCTACTGCTCTCCTGTAAGACAGAAACAAGGTCTATGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTGCTCCTACTGCTCTCCTGTAAGACAGAAACAAGGTCTATGCT  593

seq1  CATTTCCGGTTCCATCTGTACATTTTGAGGACATTCAAGTGTTAACACCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCGGTTCCATCTGTACATTTTGAGGACATTCAAGTGTTAACACCT  643

seq1  GTCTCATGCTTGAGTCTTCATGGATCACAAGAGTCCATCATCTCCCTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATGCTTGAGTCTTCATGGATCACAAGAGTCCATCATCTCCCTTAA  693

seq1  AATGACAGTGTAACAACTTTTGCAAGGGGTTTATTGGACCAGTGATAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGTGTAACAACTTTTGCAAGGGGTTTATTGGACCAGTGATAGTC  743

seq1  TCTGCTCCAATAAAGATCCAATGTGTCGTTGGATCTTCCATTTCCTGGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCAATAAAGATCCAATGTGTCGTTGGATCTTCCATTTCCTGGAC  793

seq1  TGCCTGGTTGGACTGCACTCCTCAGTGGGAGAGGAGTGCTCAGTTCTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTTGGACTGCACTCCTCAGTGGGAGAGGAGTGCTCAGTTCTGCT  843

seq1  GGGTATCCTAGGGTAGGGTGTTACCCAAGGTGGGTTCTGTTCTCTAAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCCTAGGGTAGGGTGTTACCCAAGGTGGGTTCTGTTCTCTAAGGA  893

seq1  GAAGAGGAGGGTGCAATGAGAGGAAGGATTTTATAAGGGTGGGACTGGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAGGGTGCAATGAGAGGAAGGATTTTATAAGGGTGGGACTGGGA  943

seq1  GGAGAGAAGGGAGGGGCTGCAATTGGGATGTAATGAGAATAAAAAAATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAGGGAGGGGCTGCAATTGGGATGTAATGAGAATAAAAAAATAA  993

seq1  CAAAATTATGGGGGGAAAGATGGCAGCAATTCATAAGACCTAAGGTATGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTATGGGGGGAAAGATGGCAGCAATTCATAAGACCTAAGGTATGG  1043

seq1  GAATGATGTAGCTGTTTGCCAACAGCTGAATGCATAAAGGAATACAGTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGTAGCTGTTTGCCAACAGCTGAATGCATAAAGGAATACAGTTA  1093

seq1  CGATGAATTC  1109
      ||||||||||
seq2  CGATGAATTC  1103