BAC Information

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BAC

Clone NameB6Ng01-260A07
Chromosome10 (Build37)
Map Location 47,264,340 - 47,372,835
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041632, LOC668252, LOC100042387
Downstream geneLOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260A07.bB6Ng01-260A07.g
ACCGA065050GA065051
length1,0651,135
definitionB6Ng01-260A07.b B6Ng01-260A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,371,767 - 47,372,835)(47,264,340 - 47,265,493)
sequence
gaattcactgctgttctggttatgtgaacaggatattcagagacagtcac
cttgtcaattatttatgactatctttgcttgaaaaacatagttacacaat
agtatgcttccacagaatatagtttatacagccttagttgctgttaacta
ttcacctcttgcccttatgccacaaccttcagaggtactgaacccttgtt
gttctagttttttctgtactttcatatcacatttgttctgctatgctttc
aactaagcctcttctttctctgatctgttccttttcatctaatggaccta
tttttgtgttttctaaattaatagactcttacatttaatataccagttta
agattttggagctgagtacttgttttttcggtgttttttattgatacaat
tcatttcacctacccatccagtattaggtacaaacacaaacccaagataa
acatacacaaacagaactactattgtgcaaggtaattttcctaggaacca
caacacaaataacactgtttacccaggtagatattctgaacagtccaaag
tacaggtatcactaaagtaggatggttgagagagtatgggttttggtaat
tttcttttttttttttttggtgttattaacagtaatataagcaaaaatga
ctcaaagctacctgtactaccaaatcatgagttatcatgatttacgtgag
tatcatgagttacagccaatataatttgtcaatcattcagtaagtaaact
ccttttcccggtaatacaaacaggcataattgaactcaattgaacaacaa
agataccaaagtagaaaggggacttttgagaagaatggtttctgtaggag
agatggataaatgagaaagagtaatggggaaaggtataaatagaatttgc
tatatatattggacacagggagaaactaacaaaaaatagattataaacag
ctacatatggaacatatttcaaaatatttattatatattgcgagatagtt
aacaatattttatccatatttttaaatctcaccaaacttaagaaaactag
tacagattattttca

gaattcacttatcattttttaaaaatatttgcctggaatttggttatgtc
actttcatccaggtccattattctaagaatgatcgttttagagggataca
agctgtcttggttttgcctgtttctctttatttatttatatatttattta
cttttaattaatgtacatcaagatttagactactgaatagatttattttt
gttatttatttttatactttttcttagcaaagagtctttgataaactctt
tacatgaagcctgagataccattttactctgttagactggtatattgatt
ataagctttgtcttgagtctctccctgaatgtagaatactgctttcgaca
gcagttactatttggagctaaatcggctaaagaagttaattatggcattt
tagagaataaaggaatatttgttaacaagagtatatgtactcatattcat
atgatgtacataaaggaaaaataaagaatataaaatttgtgattcatatt
ggggtaatagaaagtagaggaggctgtcatacatgtaagtggcatagcaa
ggagtcagaaagtgaagaatggtaaaatttgagccaaagagagctttaaa
attaggaaatatatgctcttagataatataggatatgtcacagagaccat
gtaaaataggccaaattgttcttttggagaggaaagatataattaaagtg
taaggaaaatataaaacaagtagaataaaagacaagaacagagtgtgcct
gaactatccagctaaagtaatactggatatgacacaaagataaagtagat
gtcaaagaagagagaaagctgggtgaaaataatgaaaaagaaaggtgact
ggcatgaatattgtctttcatctaaattttcacacattattcctctgttg
tccaaaagtactgtctaattgaaagagaaatataactggaaatcccactc
ttcttcataatattccttttggtgatgcattactgagctgtcaggctaca
gataagattagcatgtattgtctcaaatgctgttatactttacatggttt
tgcaggtacatactgttttcaacatatttggaatattagaatatttaaca
ataagtaatcggctctagtcatattctccatataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47371767_47372835
seq2: B6Ng01-260A07.b_48_1112 (reverse)

seq1  TGAAAATAAATTGTACTAGGTTTTCTTAAGTTTGTTGAGATTATAAAATA  50
      |||||||||  ||||||| ||||||||||||||| |||||||  ||||||
seq2  TGAAAATAATCTGTACTA-GTTTTCTTAAGTTTGGTGAGATTTAAAAATA  49

seq1  TGGATAAAATATTGTTAACTAATCTCGCAATATATAATAAATTATTTTGA  100
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  TGGATAAAATATTGTTAACT-ATCTCGCAATATATAATAAA-TATTTTGA  97

seq1  AATATGTTCCATATGTAGCTGTTTTATAATCTATTTTTTGTTAGTTTTCT  150
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  AATATGTTCCATATGTAGCTG-TTTATAATCTATTTTTTGTTAG-TTTCT  145

seq1  CCCTGTGTCCAATTTATATAGCAAATTCTATTTATACCTTTCCCCATTAC  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTCCAATATATATAGCAAATTCTATTTATACCTTTCCCCATTAC  195

seq1  TCTTTCTCATTTATCCATCTCTCCTACAGAAACCATTCTTCTCAAAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCATTTATCCATCTCTCCTACAGAAACCATTCTTCTCAAAAGTC  245

seq1  CCC-TTCTACTTTGGTATCTTTGTTGTTCAATTGAGTTCAATTATGCCTG  299
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTACTTTGGTATCTTTGTTGTTCAATTGAGTTCAATTATGCCTG  295

seq1  TTTGTATTACCGGGAAAAGGAGTTTACTTACTGAATGATTGACAAATTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTACCGGGAAAAGGAGTTTACTTACTGAATGATTGACAAATTAT  345

seq1  ATTGGCTGTAACTCATGATACTCACGTAAATCATGATAACTCATGATTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTGTAACTCATGATACTCACGTAAATCATGATAACTCATGATTTG  395

seq1  GTAGTACAGGTAGCTTTGAGTCATTTTTGCTTATATTACTGTTAATAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTACAGGTAGCTTTGAGTCATTTTTGCTTATATTACTGTTAATAACA  445

seq1  CCAAAAAAAAAAAAAAGAAAATTACCAAAACCCATACTCTCTCAACCATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAAAAAAAAAAGAAAATTACCAAAACCCATACTCTCTCAACCATC  495

seq1  CTACTTTAGTGATACCTGTACTTTGGACTGTTCAGAATATCTACCTGGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTAGTGATACCTGTACTTTGGACTGTTCAGAATATCTACCTGGGT  545

seq1  AAACAGTGTTATTTGTGTTGTGGTTCCTAGGAAAATTACCTTGCACAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGTTATTTGTGTTGTGGTTCCTAGGAAAATTACCTTGCACAATA  595

seq1  GTAGTTCTGTTTGTGTATGTTTATCTTGGGTTTGTGTTTGTACCTAATAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTGTTTGTGTATGTTTATCTTGGGTTTGTGTTTGTACCTAATAC  645

seq1  TGGATGGGTAGGTGAAATGAATTGTATCAATAAAAAACACCGAAAAAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGGTAGGTGAAATGAATTGTATCAATAAAAAACACCGAAAAAACA  695

seq1  AGTACTCAGCTCCAAAATCTTAAACTGGTATATTAAATGTAAGAGTCTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCAGCTCCAAAATCTTAAACTGGTATATTAAATGTAAGAGTCTAT  745

seq1  TAATTTAGAAAACACAAAAATAGGTCCATTAGATGAAAAGGAACAGATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGAAAACACAAAAATAGGTCCATTAGATGAAAAGGAACAGATCA  795

seq1  GAGAAAGAAGAGGCTTAGTTGAAAGCATAGCAGAACAAATGTGATATGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAGAGGCTTAGTTGAAAGCATAGCAGAACAAATGTGATATGAA  845

seq1  AGTACAGAAAAAACTAGAACAACAAGGGTTCAGTACCTCTGAAGGTTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGAAAAAACTAGAACAACAAGGGTTCAGTACCTCTGAAGGTTGTG  895

seq1  GCATAAGGGCAAGAGGTGAATAGTTAACAGCAACTAAGGCTGTATAAACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGGGCAAGAGGTGAATAGTTAACAGCAACTAAGGCTGTATAAACT  945

seq1  ATATTCTGTGGAAGCATACTATTGTGTAACTATGTTTTTCAAGCAAAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGTGGAAGCATACTATTGTGTAACTATGTTTTTCAAGCAAAGAT  995

seq1  AGTCATAAATAATTGACAAGGTGACTGTCTCTGAATATCCTGTTCACATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATAAATAATTGACAAGGTGACTGTCTCTGAATATCCTGTTCACATA  1045

seq1  ACCAGAACAGCAGTGAATTC  1069
      ||||||||||||||||||||
seq2  ACCAGAACAGCAGTGAATTC  1065


seq1: chr10_47264340_47265493
seq2: B6Ng01-260A07.g_65_1199

seq1  GAATTCACTTATCATTTTTTAAAAATATTTGCCTGGAATTTGGTTATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTATCATTTTTTAAAAATATTTGCCTGGAATTTGGTTATGTC  50

seq1  ACTTTCATCCAGGTCCATTATTCTAAGAATGATCGTTTTAGAGGGATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATCCAGGTCCATTATTCTAAGAATGATCGTTTTAGAGGGATACA  100

seq1  AGCTGTCTTGGTTTTGCCTGTTTCTCTTTATTTATTTATATATTTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTTGGTTTTGCCTGTTTCTCTTTATTTATTTATATATTTATTTA  150

seq1  CTTTTAATTAATGTACATCAAGATTTAGACTACTGAATAGATTTATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTAATGTACATCAAGATTTAGACTACTGAATAGATTTATTTTT  200

seq1  GTTATTTATTTTTATACTTTTTCTTAGCAAAGAGTCTTTGATAAACTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTATTTTTATACTTTTTCTTAGCAAAGAGTCTTTGATAAACTCTT  250

seq1  TACATGAAGCCTGAGATACCATTTTACTCTGTTAGACTGGTATATTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAAGCCTGAGATACCATTTTACTCTGTTAGACTGGTATATTGATT  300

seq1  ATAAGCTTTGTCTTGAGTCTCTCCCTGAATGTAGAATACTGCTTTCGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTTTGTCTTGAGTCTCTCCCTGAATGTAGAATACTGCTTTCGACA  350

seq1  GCAGTTACTATTTGGAGCTAAATCGGCTAAAGAAGTTAATTATGGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTACTATTTGGAGCTAAATCGGCTAAAGAAGTTAATTATGGCATTT  400

seq1  TAGAGAATAAAGGAATATTTGTTAACAAGAGTATATGTACTCATATTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATAAAGGAATATTTGTTAACAAGAGTATATGTACTCATATTCAT  450

seq1  ATGATGTACATAAAGGAAAAATAAAGAATATAAAATTTGTGATTCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTACATAAAGGAAAAATAAAGAATATAAAATTTGTGATTCATATT  500

seq1  GGGGTAATAGAAAGTAGAGGAGGCTGTCATACATGTAAGTGGCATAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAATAGAAAGTAGAGGAGGCTGTCATACATGTAAGTGGCATAGCAA  550

seq1  GGAGTCAGAAAGTGAAGAATGGTAAAATTTGAGCCAAAGAGAGCTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGAAAGTGAAGAATGGTAAAATTTGAGCCAAAGAGAGCTTTAAA  600

seq1  ATTAGGAAATATATGCTCTTAGATAATATAGGATATGTCACAGAGACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAAATATATGCTCTTAGATAATATAGGATATGTCACAGAGACCAT  650

seq1  GTAAAATAGGCCAAATTGTTCTTTTGGAGAGGAAAGATATAATTAAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATAGGCCAAATTGTTCTTTTGGAGAGGAAAGATATAATTAAAGTG  700

seq1  TAAGGAAAATATAAAACAAGTAGAATAAAAGACAAGAACAGAGTGTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAATATAAAACAAGTAGAATAAAAGACAAGAACAGAGTGTGCCT  750

seq1  GAACTATCCAGCTAAAGTAATACTGGATATGACACAAAGATAAAGTAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATCCAGCTAAAGTAATACTGGATATGACACAAAGATAAAGTAGAT  800

seq1  GTCAAAGAAGAGAGAAAGCTGGGTGAAAATAATGAAAAAGAAAGGTGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAAGAGAGAAAGCTGGGTGAAAATAATGAAAAAGAAAGGTGACT  850

seq1  GGCATGAATATTGTCTTTCATCTAAATTTTCACACATTATTCCTCTGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAATATTGTCTTTCATCTAAATTTTCACACATTATTCCTCTGTTG  900

seq1  TCCAAAAGTACTGTCTAATTGAAAGAGAAATATAACTGGAAATCCCACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGTACTGTCTAATTGAAAGAGAAATATAACTGGAAATCCCACTC  950

seq1  TTCTTCATAAATATTCCTTTTGGTGATTGCAATTACTGAAGCTGTCCAGG  1000
      |||||||| ||||||||||||||||| ||| ||||||| |||||| ||||
seq2  TTCTTCAT-AATATTCCTTTTGGTGA-TGC-ATTACTG-AGCTGT-CAGG  995

seq1  CTACAGATAAGAATTAGCATGTATTGTCTCAAATGCTGTTATACCTTTAC  1050
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  CTACAGATAAG-ATTAGCATGTATTGTCTCAAATGCTGTTATA-CTTTAC  1043

seq1  ATGTTTTTGCAGGGGTACAATACTGTTTTCAACATATTT-GAATATTAGA  1099
      ||| |||||||  ||||| |||||||||||||||||||| ||||||||||
seq2  ATGGTTTTGCA--GGTAC-ATACTGTTTTCAACATATTTGGAATATTAGA  1090

seq1  ATATTTTAACAAATAAAGGTAAATCTGCTCTTAGTTCACTTATTTCTCCA  1149
      ||| |||||| |||||  || |||| |||| ||||   | || |||||||
seq2  ATA-TTTAAC-AATAA--GT-AATCGGCTC-TAGT---CATA-TTCTCCA  1130

seq1  TATAA  1154
      |||||
seq2  TATAA  1135


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