BAC Information

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BAC

Clone NameB6Ng01-260C06
Chromosome10 (Build37)
Map Location 117,846,668 - 117,847,496
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216
Downstream geneIfng, LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260C06.b
ACCGA065138
length829
definitionB6Ng01-260C06.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttaacttgatttctatcttttctttttcctttggattttgc
tttcttttattcatattttcatgagtgaattctatattggaaattagtat
aaggtgaatattaagaccccagaccttagaaccagaagcacactggttca
gaattctcctgacctacaacttagatcacaagaaacgtgagttcttttct
tgggccctgtctttcctcagtttaaattagagaagacactagctgcctgt
attgaactgttgtggagagtaaagctattggtgatgttcataaaacaatt
agaagcctatcagttctacaatcacctaggattttactgatgatggtaat
ggtgacagtgatggtcaatgtcattgtcactggtacctgccagaatttgg
tggtttgcactgtgtgtcctaggtttacaatgtttgcttgtaattaacat
tgtcatcagacacaaggctcgatttcagcagcagagaactgaatctaacc
ataagtgaagttttggcctggtgacaatagtcaagaaaggaaagataaga
gatagactataaaatttaggctagctactgaggaaaataaagatatgaat
agagttagagatgcagaaaagatagtaatggtggtgaattgtcaactttc
atgggtgctgaacgattgttgcagtgagttctaaagagagcaagctgcaa
cattgtagagagtagattcttgaacctgaaatcattccaggatgagaaca
gtccttgctattttaggatcaagttctaggatcttctggaagaactgact
ttgggggttagggttagggttagaggtta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_117846668_117847496
seq2: B6Ng01-260C06.b_44_872 (reverse)

seq1  TAACCTCTAACCCTAACCCTAACCCCCAAAGTCAGTTCTTCCAGAAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCTAACCCTAACCCTAACCCCCAAAGTCAGTTCTTCCAGAAGATC  50

seq1  CTAGAACTTGATCCTAAAATAGCAAGGACTGTTCTCATCCTGGAATGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACTTGATCCTAAAATAGCAAGGACTGTTCTCATCCTGGAATGATT  100

seq1  TCAGGTTCAAGAATCTACTCTCTACAATGTTGCAGCTTGCTCTCTTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTCAAGAATCTACTCTCTACAATGTTGCAGCTTGCTCTCTTTAGA  150

seq1  ACTCACTGCAACAATCGTTCAGCACCCATGAAAGTTGACAATTCACCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGCAACAATCGTTCAGCACCCATGAAAGTTGACAATTCACCACC  200

seq1  ATTACTATCTTTTCTGCATCTCTAACTCTATTCATATCTTTATTTTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTATCTTTTCTGCATCTCTAACTCTATTCATATCTTTATTTTCCTC  250

seq1  AGTAGCTAGCCTAAATTTTATAGTCTATCTCTTATCTTTCCTTTCTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTAGCCTAAATTTTATAGTCTATCTCTTATCTTTCCTTTCTTGAC  300

seq1  TATTGTCACCAGGCCAAAACTTCACTTATGGTTAGATTCAGTTCTCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCACCAGGCCAAAACTTCACTTATGGTTAGATTCAGTTCTCTGCT  350

seq1  GCTGAAATCGAGCCTTGTGTCTGATGACAATGTTAATTACAAGCAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAATCGAGCCTTGTGTCTGATGACAATGTTAATTACAAGCAAACAT  400

seq1  TGTAAACCTAGGACACACAGTGCAAACCACCAAATTCTGGCAGGTACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACCTAGGACACACAGTGCAAACCACCAAATTCTGGCAGGTACCAG  450

seq1  TGACAATGACATTGACCATCACTGTCACCATTACCATCATCAGTAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGACATTGACCATCACTGTCACCATTACCATCATCAGTAAAATC  500

seq1  CTAGGTGATTGTAGAACTGATAGGCTTCTAATTGTTTTATGAACATCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGATTGTAGAACTGATAGGCTTCTAATTGTTTTATGAACATCACC  550

seq1  AATAGCTTTACTCTCCACAACAGTTCAATACAGGCAGCTAGTGTCTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTTACTCTCCACAACAGTTCAATACAGGCAGCTAGTGTCTTCTC  600

seq1  TAATTTAAACTGAGGAAAGACAGGGCCCAAGAAAAGAACTCACGTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAACTGAGGAAAGACAGGGCCCAAGAAAAGAACTCACGTTTCTT  650

seq1  GTGATCTAAGTTGTAGGTCAGGAGAATTCTGAACCAGTGTGCTTCTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTAAGTTGTAGGTCAGGAGAATTCTGAACCAGTGTGCTTCTGGTT  700

seq1  CTAAGGTCTGGGGTCTTAATATTCACCTTATACTAATTTCCAATATAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTCTGGGGTCTTAATATTCACCTTATACTAATTTCCAATATAGAA  750

seq1  TTCACTCATGAAAATATGAATAAAAGAAAGCAAAATCCAAAGGAAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCATGAAAATATGAATAAAAGAAAGCAAAATCCAAAGGAAAAAGA  800

seq1  AAAGATAGAAATCAAGTTAAATGGAATTC  829
      |||||||||||||||||||||||||||||
seq2  AAAGATAGAAATCAAGTTAAATGGAATTC  829