BAC Information

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BAC

Clone NameB6Ng01-260D08
Chromosome10 (Build37)
Map Location 94,982,853 - 95,105,022
singlet/doubletdoublet
Overlap geneUbe2n, Nudt4
Upstream geneTmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e
Downstream geneEG628119, Eea1, EG432491, LOC667380, Btg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260D08.bB6Ng01-260D08.g
ACCGA065186GA065187
length1,0201,164
definitionB6Ng01-260D08.b B6Ng01-260D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,104,456 - 95,105,022)(94,982,853 - 94,984,021)
sequence
gaattctgttcccagaagataatgtgtcctcacctatatctcctgccaag
tccaacacacacacacactctctctctctctctctctctctctctctctc
actcacacacacacacacaccccatatatacatacacacataaacaccac
acacacacacacacacaccaaggcttaaacttctttcactggcaacttct
ttcacccaataaatttttatcagaccttagctatacaagtgtataaaata
ggtacacatatcaaacatttactgatataaagtcatacctttattttaaa
ataattctttgatacacataagtttatcatttcctcaagatgaaagtaaa
tttgcatgctgataaaatgaatgtttatttttacagaatgatttaaattt
tggctgcatactttatattgcagaacaaagaacatcttgacattcttctg
agctgatagaaattttcactgcataatcactgatacctcttcatacaaac
gtatagtacaaaatgacatactgtattctgcaaaaagccactgcaaaaat
tgttggaaatgttttactcccaagccaaagcccacttaatgactgcttac
aaaattcaagtcagcaatttaaacagcaattccactctaacacaatacaa
cccacagacagacaggcggatttgatacatgctaaagagtagtggcagga
ataaaggagactttttctataattaaaccattatgtttctatgagagcaa
aaaagaaaatgtgtgtgcggtgaaaatactgtacttcagagcatacagta
gtctcagagctgggccaaggtattaaaatagctaggttggcactgagagt
cgggacggcatgcacagtgcacaggagcatgccgtggtcatagccagctg
cattgaagtcatttgatacacactggcagccctacaagaaaggtctaaga
ttcagtatgcatttgatgtggagctatttgcagttgttacatggtcagaa
acctttacttttacaaattt
gaattctctttgtagttgagtgttggggtagagctaaggttgccaggtca
atgcttactcactgagctatctctgatcctatttgattgttttgagacta
gggtggtcttgtacttgacagcttgttttagcttccagtgtggtgggatc
ataggcataccaacaaactcaaagagatattctcttgtgtttttaaaatt
agtcatggacaataaaatagtctgataaaatagtagctgacttactcaag
gagatagttgacttacttgattaaaatctagcaagctaagggggagtgat
gtcgcttacccaatataatgtttgtctagagtttttaaaagccctgggtt
tggtggcccatgggctatatagtttaaatacttgggaagtagatgcagga
aaatcttgaacttcaaggttatccttttctgttgagttccatccagcctg
gaatacattttaaaaccaaccaaacagccaacctactgacttagcttgga
catcctttttaccaattttcctttcctatatggtgagggtttctgcttct
ctcccctttcctcttctttatattttatttctttttgagtcagggccttg
ctgtgcaagatgggttcttgcttgtgttcctcctgtttgagcctcctaaa
tgctgagatcatggaagtgtgtcctctcagccacattcttagttcttttc
tgctctgcaactgtgtaaagcttgagctcctgctaagctatagtcagccc
ataaagtactgtgaagtgttgactctagcatctaattctaattgttcata
catcttgcttttacaaagaaaattggctgttcatatttgcaaggtcttta
attttcagtactatcatttgtctttctggttggttaattttagataagtc
aatttgtattttcaaagtatttacagatttaggaagtataactattgtag
ctaagaaaacaacacgtcactaatctagtaagactcttaaggatgagtat
cattcttcataactgaatttgtctgccttttctgtctctactcaaaagct
gcgctatgcagagggaatagtcagttataaagtgtaaagaaaagtactga
aatattagttccagttacctgatgttaccttaaggttaaggttgtgaatc
ctgtttagttgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_95104456_95105022
seq2: B6Ng01-260D08.b_44_610 (reverse)

seq1  GTAAAACATTTCCAACAATTTTTGCAGTGGCTTTTTGCAGAATACAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACATTTCCAACAATTTTTGCAGTGGCTTTTTGCAGAATACAGTAT  50

seq1  GTCATTTTGTACTATACGTTTGTATGAAGAGGTATCAGTGATTATGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTGTACTATACGTTTGTATGAAGAGGTATCAGTGATTATGCAGT  100

seq1  GAAAATTTCTATCAGCTCAGAAGAATGTCAAGATGTTCTTTGTTCTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCTATCAGCTCAGAAGAATGTCAAGATGTTCTTTGTTCTGCAA  150

seq1  TATAAAGTATGCAGCCAAAATTTAAATCATTCTGTAAAAATAAACATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTATGCAGCCAAAATTTAAATCATTCTGTAAAAATAAACATTCA  200

seq1  TTTTATCAGCATGCAAATTTACTTTCATCTTGAGGAAATGATAAACTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAGCATGCAAATTTACTTTCATCTTGAGGAAATGATAAACTTAT  250

seq1  GTGTATCAAAGAATTATTTTAAAATAAAGGTATGACTTTATATCAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCAAAGAATTATTTTAAAATAAAGGTATGACTTTATATCAGTAAA  300

seq1  TGTTTGATATGTGTACCTATTTTATACACTTGTATAGCTAAGGTCTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATATGTGTACCTATTTTATACACTTGTATAGCTAAGGTCTGATA  350

seq1  AAAATTTATTGGGTGAAAGAAGTTGCCAGTGAAAGAAGTTTAAGCCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATTGGGTGAAAGAAGTTGCCAGTGAAAGAAGTTTAAGCCTTGG  400

seq1  TGTGTGTGTGTGTGTGTGTGGTGTTTATGTGTGTATGTATATATGGGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGGTGTTTATGTGTGTATGTATATATGGGGTG  450

seq1  TGTGTGTGTGTGTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500

seq1  TGTGTGTGTGTGTTGGACTTGGCAGGAGATATAGGTGAGGACACATTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTTGGACTTGGCAGGAGATATAGGTGAGGACACATTATC  550

seq1  TTCTGGGAACAGAATTC  567
      |||||||||||||||||
seq2  TTCTGGGAACAGAATTC  567

seq1: chr10_94982853_94984021
seq2: B6Ng01-260D08.g_67_1230

seq1  GAATTCTCTTTGTAGTTGAGTGTTGGGGTAGAGCTAAGGTTGCCAGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGTAGTTGAGTGTTGGGGTAGAGCTAAGGTTGCCAGGTCA  50

seq1  ATGCTTACTCACTGAGCTATCTCTGATCCTATTTGATTGTTTTGAGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTACTCACTGAGCTATCTCTGATCCTATTTGATTGTTTTGAGACTA  100

seq1  GGGTGGTCTTGTACTTGACAGCTTGTTTTAGCTTCCAGTGTGGTGGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTCTTGTACTTGACAGCTTGTTTTAGCTTCCAGTGTGGTGGGATC  150

seq1  ATAGGCATACCAACAAACTCAAAGAGATATTCTCTTGTGTTTTTAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATACCAACAAACTCAAAGAGATATTCTCTTGTGTTTTTAAAATT  200

seq1  AGTCATGGACAATAAAATAGTCTGATAAAATAGTAGCTGACTTACTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGACAATAAAATAGTCTGATAAAATAGTAGCTGACTTACTCAAG  250

seq1  GAGATAGTTGACTTACTTGATTAAAATCTAGCAAGCTAAGGGGGAGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGTTGACTTACTTGATTAAAATCTAGCAAGCTAAGGGGGAGTGAT  300

seq1  GTCGCTTACCCAATATAATGTTTGTCTAGAGTTTTTAAAAGCCCTGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCTTACCCAATATAATGTTTGTCTAGAGTTTTTAAAAGCCCTGGGTT  350

seq1  TGGTGGCCCATGGGCTATATAGTTTAAATACTTGGGAAGTAGATGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCCCATGGGCTATATAGTTTAAATACTTGGGAAGTAGATGCAGGA  400

seq1  AAATCTTGAACTTCAAGGTTATCCTTTTCTGTTGAGTTCCATCCAGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGAACTTCAAGGTTATCCTTTTCTGTTGAGTTCCATCCAGCCTG  450

seq1  GAATACATTTTAAAACCAACCAAACAGCCAACCTACTGACTTAGCTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATTTTAAAACCAACCAAACAGCCAACCTACTGACTTAGCTTGGA  500

seq1  CATCCTTTTTACCAATTTTCCTTTCCTATATGGTGAGGGTTTCTGCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTTTACCAATTTTCCTTTCCTATATGGTGAGGGTTTCTGCTTCT  550

seq1  CTCCCCTTTCCTCTTCTTTATATTTTATTTCTTTTTGAGTCAGGGCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTTCCTCTTCTTTATATTTTATTTCTTTTTGAGTCAGGGCCTTG  600

seq1  CTGTGCAAGATGGGTTCTTGCTTGTGTTCCTCCTGTTTGAGCCTCCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAAGATGGGTTCTTGCTTGTGTTCCTCCTGTTTGAGCCTCCTAAA  650

seq1  TGCTGAGATCATGGAAGTGTGTCCTCTCAGCCACATTCTTAGTTCTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGATCATGGAAGTGTGTCCTCTCAGCCACATTCTTAGTTCTTTTC  700

seq1  TGCTCTGCAACTGTGTAAAGCTTGAGCTCCTGCTAAGCTATAGTCAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCAACTGTGTAAAGCTTGAGCTCCTGCTAAGCTATAGTCAGCCC  750

seq1  ATAAAGTACTGTGAAGTGTTGACTCTAGCATCTAATTCTAATTGTTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTACTGTGAAGTGTTGACTCTAGCATCTAATTCTAATTGTTCATA  800

seq1  CATCTTGCTTTTACAAAGAAAATTGGCTGTTCATATTTGCAAGGTCTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCTTTTACAAAGAAAATTGGCTGTTCATATTTGCAAGGTCTTTA  850

seq1  ATTTTCAGTACTATCATTTGTCTTTCTGGTTGGTTAATTTTAGATAAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTACTATCATTTGTCTTTCTGGTTGGTTAATTTTAGATAAGTC  900

seq1  AATTTGTATTTTCAAAGTATTTACAGATTTAGGAAGTATAACTATTGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATTTTCAAAGTATTTACAGATTTAGGAAGTATAACTATTGTAG  950

seq1  CTAAGAAAACAAACACGTCACTAATCTAGTAAGACTCTTAAGGATGAGTA  1000
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAAC-AACACGTCACTAATCTAGTAAGACTCTTAAGGATGAGTA  999

seq1  TCATTCTTCCATAACTG-ATTTGTCTGCC-TTTCTGTCTTCTACTCAAAA  1048
      |||||||| |||||||| ||||||||||| |||||||| |||||||||||
seq2  TCATTCTT-CATAACTGAATTTGTCTGCCTTTTCTGTC-TCTACTCAAAA  1047

seq1  GCTGCGCTATGCAGAGGGAATAGTCAG-TATAAAGTGTAGAG-AAAGTAC  1096
      ||||||||||||||||||||||||||| ||||||||||| || |||||||
seq2  GCTGCGCTATGCAGAGGGAATAGTCAGTTATAAAGTGTAAAGAAAAGTAC  1097

seq1  TGAAATATTAAGTCCAG-TAACTGATGTTAACCTTAAAAGTTTTAGGGTT  1145
      ||||||||||  ||||| || |||||||| |||||  ||| || ||    
seq2  TGAAATATTAGTTCCAGTTACCTGATGTT-ACCTT--AAGGTTAAG----  1140

seq1  GTTGAAAATCCTGTTTAGTTGCTG  1169
      ||||  ||||||||||||||||||
seq2  GTTGTGAATCCTGTTTAGTTGCTG  1164