BAC Information

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BAC

Clone NameB6Ng01-260D22
Chromosome10 (Build37)
Map Location 102,778,522 - 102,779,606
singlet/doubletsinglet
Overlap genenone
Upstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1
Downstream geneLOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260D22.bB6Ng01-260D22.g
ACCGA065214GA065215
length1,082333
definitionB6Ng01-260D22.b B6Ng01-260D22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccatgctattttaaaaggattagaatcaccataagaaaaagt
gcattaacttttcataacactacttattattaaataataccttgtaattc
tattatgataaaatcacagaatcatatcgtataaataatataccacatag
tataaatcatgtaaagaattttcttaccgtctaccattctttagggaaga
atgcatacaaaagtagagaacaaacctaaaaggcaacagaagatctaaat
aacatgaaccaaaatgtgagatagatatgcatatgactcacaagaattat
tattctgcagaattatgtagaaaactgaaagaaaattgatttcatttgga
acaaagaataagaaaatcattttgattatatggaaatgaatgagcaacat
catgggaaaggatggtagcatcacagagctgctgttaatgaaggggtcac
aagggatcggtttagctcagatcagagaatactgagctcgcatggccagg
atgcaggaggaggaagccacagagagtacacatagttccagcctctcaaa
aatgtaatacaggaaaatctcaacgctattgtcaaacatgctgtcgtgtt
tcctaatcaggtaaaatgcccaggagaactaagttctaatggtttcgtaa
gccttctctacatttggacccttagaaggtcccttgaactgaattcatga
cctggaattactgattctttcaaaaaacaaatagactatagcagacctgg
aaaatgatccgttttaagacggcataaaagagctttaacttatatattgg
tcattcacagtacttacagtaaaacatgtgtcatgtattgctacagcata
acccagaagccagaaatagtgtccaaacaacagctactgagaaagagtac
aaaggtcttctaccagccagatacttggcagtagagactccttgcagcag
ctctgaacagatagactagtagtaacgatatgatatactttaagccatat
gagctcatgtgagctggactcccatcacaaagatgtagtgaaactgctag
gcatagtagcatttactatgcacagcagatcc
cattcataaccctgcattttgactggctgtggttttctaagaagtacaat
catcaccgggaggagaggtccttagtcctgtgacagttctatgccccagg
ataggggaatgtatgggcgagggagcagaagtgggtgggttagggagcag
ggggagaagagaggagatagagaattttcaaaggggaaacttggaaaggg
gataacatttgaatgtaaataaagaaatatcttaaaatatataaagaagt
acaacaatatgtgagcctaagggtaaatatttagaatgtagggtttttgt
ttgttgtttgtttatttataaatgccgttttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102778522_102779606
seq2: B6Ng01-260D22.b_44_1125

seq1  GAATTCCACCATGCTATTTTAAAAGGATTAGAATCACCATAAGAAAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCATGCTATTTTAAAAGGATTAGAATCACCATAAGAAAAAGT  50

seq1  GCATTAACTTTTCATAACACTACTTATTATTAAATAATACCTTGTAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAACTTTTCATAACACTACTTATTATTAAATAATACCTTGTAATTC  100

seq1  TATTATGATAAAATCACAGAATCATATCGTATAAATAATATACCACATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGATAAAATCACAGAATCATATCGTATAAATAATATACCACATAG  150

seq1  TATAAATCATGTAAAGAATTTTCTTACCGTCTACCATTCTTTAGGGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATCATGTAAAGAATTTTCTTACCGTCTACCATTCTTTAGGGAAGA  200

seq1  ATGCATACAAAAGTAGAGAACAAACCTAAAAGGCAACAGAAGATCTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATACAAAAGTAGAGAACAAACCTAAAAGGCAACAGAAGATCTAAAT  250

seq1  AACATGAACCAAAATGTGAGATAGATATGCATATGACTCACAAGAATTGT  300
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACATGAACCAAAATGTGAGATAGATATGCATATGACTCACAAGAATTAT  300

seq1  TATTCTGCAGAATTATGTAGAAAACTGAAAGAAAATTGATTTCATTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGCAGAATTATGTAGAAAACTGAAAGAAAATTGATTTCATTTGGA  350

seq1  ACAAAGAATAAGAAAATCATTTTGATTATATGGAAATGAATGAGCAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAATAAGAAAATCATTTTGATTATATGGAAATGAATGAGCAACAT  400

seq1  CATGGGAAAGGATGGTAGCATCACAGAGCTGCTGTTAATGAAGGGGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAAAGGATGGTAGCATCACAGAGCTGCTGTTAATGAAGGGGTCAC  450

seq1  AAGGGATCGGTTTAGCTCAGATCAGAGAATACTGAGCTCGCATGGCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATCGGTTTAGCTCAGATCAGAGAATACTGAGCTCGCATGGCCAGG  500

seq1  ATGCAGGAGGAGGAAGCCACAGAGAGTACACATAGTTCCAGCCTCTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGAGGAGGAAGCCACAGAGAGTACACATAGTTCCAGCCTCTCAAA  550

seq1  AATGTAATACAGGAAAATCTCAACGCTATTGTCAAACATGCTGTCGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATACAGGAAAATCTCAACGCTATTGTCAAACATGCTGTCGTGTT  600

seq1  TCCTAATCAGGTAAAATGCCCAGGAGAACTAAGTTCTAATGGTTTCGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATCAGGTAAAATGCCCAGGAGAACTAAGTTCTAATGGTTTCGTAA  650

seq1  GCCTTCTCTACATTTGGACCCTTAGAAGGTCCCTTGAACTGAATTCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTCTACATTTGGACCCTTAGAAGGTCCCTTGAACTGAATTCATGA  700

seq1  CCTGGAATTACTGATTCTTTCAAAAAACAAATAGACTATAGCAGACCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATTACTGATTCTTTCAAAAAACAAATAGACTATAGCAGACCTGG  750

seq1  AAAATGATCCGTTTTAAGACGGCATAAAAGAGCTTTAACTTATATATTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATCCGTTTTAAGACGGCATAAAAGAGCTTTAACTTATATATTGG  800

seq1  TCATTCACAGTACTTACAGTAAAACATGTGTCATGTATTGCTACAGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACAGTACTTACAGTAAAACATGTGTCATGTATTGCTACAGCATA  850

seq1  ACCCAGAAGCCAGAAATAGTGTCCAAACAACAGCTACTGAGAAAGAGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAGCCAGAAATAGTGTCCAAACAACAGCTACTGAGAAAGAGTAC  900

seq1  -AAGGTCTTCTACCAGCCAGATACTTGGCAGTAGAGACTCCTTGCAGCAG  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCTTCTACCAGCCAGATACTTGGCAGTAGAGACTCCTTGCAGCAG  950

seq1  CTCTGAACAGATAGACTAGTAGTAACGATATGATATACTTTAAGCCATAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACAGATAGACTAGTAGTAACGATATGATATACTTTAAGCCATAT  1000

seq1  GAGCTCATGTGAGCTGGACTCCCATCACAAAGATGTAGGTGAAACTGCTA  1049
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGCTCATGTGAGCTGGACTCCCATCACAAAGATGTA-GTGAAACTGCTA  1049

seq1  GGCATAAGTAGCAATTTACTATGCAACAGCAGATCC  1085
      ||||| |||||| ||||||||||| |||||||||||
seq2  GGCAT-AGTAGC-ATTTACTATGC-ACAGCAGATCC  1082