BAC Information

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BAC

Clone NameB6Ng01-260I16
Chromosome10 (Build37)
Map Location 52,178,491 - 52,179,579
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e
Downstream geneEG629689, Zfa, Slc35f1, Pln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260I16.bB6Ng01-260I16.g
ACCGA065436GA065437
length1,09172
definitionB6Ng01-260I16.b B6Ng01-260I16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagacagtagatatgttagcattattattgtttattcatttat
agtatgacactaggttctatttgattattttgttcttttttttaagaatt
ttgctcttaaatgagttacatttgaaattttttgttctttgaaatataat
tcaagtacttgaattgatggtatgttttctttgtaacagtaagagacaga
ttttctccttgtaccactatttaaggaggctggtataatttgatccttgc
agatttggtatattcctggcttgtttaggttaggcatttggtgagtttca
aaattgcaatcataatttgtcccgtgtcaaatttggtaagtttgtatgtt
ttctagtaattacctattttatctaacatataattagtttgcaaagacac
aaatgaatttatcttttgttcttttaatctttcaaggatatgttattggc
attcaaggtgttttccttctcattccctgtttttgtgtgttttgttctgt
ctcctgccatctcccctctgattggctgatcagtgaatcatttcttgttt
tgcttaatgtttttgagccaaatttttcatttgctttgttattttgtttt
aaataattatttctactttttgcttattacatttttcttttacctgtctt
tattgctattttatagcttctaaaattaagaaatatattcatttttatca
gagaagtatatctgctctaaaagttttgccaatcagtgctttaatttcat
attatatattttagtatataattttttgtaggtacctgtcaatcttgatt
ttataaaagttgtatttatttattatatacaagtacactgtataatatat
attattatatataagacactgtagctgtcttcagacacaccagaagaggg
catcagatctcattacagatggttgtgagccatcatatggttgctgggat
ttgaactcaggacctctggaagagcagtcagtgttcttaactactgagcc
atctctccagcccctcagtcttgatttttgtttttcttcaactagtctga
tttatatatgagcctattttgattgcttgtttgcttggaga
caggatagcctgctctacaaagtgagttccaggacagccagggctatgca
gagaaaccctgtcttgaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_52178491_52179579
seq2: B6Ng01-260I16.b_46_1136

seq1  GAATTCACAGACAGTAGATATGTTAGCATTATTATTGTTTATTCATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGACAGTAGATATGTTAGCATTATTATTGTTTATTCATTTAT  50

seq1  AGTATGACACTAGGTTCTATTTGATTATTTTGTTCTTTTTTTTAAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGACACTAGGTTCTATTTGATTATTTTGTTCTTTTTTTTAAGAATT  100

seq1  TTGCTCTTAAATGAGTTACATTTGAAATTTTTTGTTCTTTGAAATATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTAAATGAGTTACATTTGAAATTTTTTGTTCTTTGAAATATAAT  150

seq1  TCAAGTACTTGAATTGATGGTATGTTTTCTTTGTAACAGTAAGAGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTACTTGAATTGATGGTATGTTTTCTTTGTAACAGTAAGAGACAGA  200

seq1  TTTTCTCCTTGTACCACTATTTAAGGAGGCTGGTATAATTTGATCCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTTGTACCACTATTTAAGGAGGCTGGTATAATTTGATCCTTGC  250

seq1  AGATTTGGTATATTCCTGGCTTGTTTAGGTTAGGCATTTGGTGAGTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGTATATTCCTGGCTTGTTTAGGTTAGGCATTTGGTGAGTTTCA  300

seq1  AAATTGCAATCATAATTTGTCCCGTGTCAAATTTGGTAAGTTTGTATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCAATCATAATTTGTCCCGTGTCAAATTTGGTAAGTTTGTATGTT  350

seq1  TTCTAGTAATTACCTATTTTATCTAACATATAATTAGTTTGCAAAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTAATTACCTATTTTATCTAACATATAATTAGTTTGCAAAGACAC  400

seq1  AAATGAATTTATCTTTTGTTCTTTTAATCTTTCAAGGATATGTTATTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTTATCTTTTGTTCTTTTAATCTTTCAAGGATATGTTATTGGC  450

seq1  ATTCAAGGTGTTTTCCTTCTCATTCCCTGTTTTTGTGTGTTTTGTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGGTGTTTTCCTTCTCATTCCCTGTTTTTGTGTGTTTTGTTCTGT  500

seq1  CTCCTGCCATCTCCCCTCTGATTGGCTGATCAGTGAATCATTTCTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCATCTCCCCTCTGATTGGCTGATCAGTGAATCATTTCTTGTTT  550

seq1  TGCTTAATGTTTTTGAGCCAAATTTTTCATTTGCTTTGTTATTTTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATGTTTTTGAGCCAAATTTTTCATTTGCTTTGTTATTTTGTTTT  600

seq1  AAATAATTATTTCTACTTTTTGCTTATTACATTTTTCTTTTACCTGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTATTTCTACTTTTTGCTTATTACATTTTTCTTTTACCTGTCTT  650

seq1  TATTGCTATTTTATAGCTTCTAAAATTAAGAAATATATTCATTTTTATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTATTTTATAGCTTCTAAAATTAAGAAATATATTCATTTTTATCA  700

seq1  GAGAAGTATATCTGCTCTAAAAGTTTTGCCAATCAGTGCTTTAATTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTATATCTGCTCTAAAAGTTTTGCCAATCAGTGCTTTAATTTCAT  750

seq1  ATTATATATTTTAGTATATAA-TTTTTGTAGGTACCTGTCAATCTTGATT  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTATATATTTTAGTATATAATTTTTTGTAGGTACCTGTCAATCTTGATT  800

seq1  TTATAAAAGTTGTATTTATTTATTATATACAAGTACACTGTATAATATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGTTGTATTTATTTATTATATACAAGTACACTGTATAATATAT  850

seq1  ATTATTATATATAAGACACTGTAGCTGTCTTCAGACACACCAGAAGAGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATATATAAGACACTGTAGCTGTCTTCAGACACACCAGAAGAGGG  900

seq1  CATCAGATCTCATTACAGATGGTTGTGAGCCATCATATGGTTGCTGGGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGATCTCATTACAGATGGTTGTGAGCCATCATATGGTTGCTGGGAT  950

seq1  TTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGTTCTTAACTACTGAGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGTTCTTAACTACTGAGCC  1000

seq1  ATCTCTCCAGCCCCTCAGTCTTGATTTTTGTTTTTCTTCAACTAGTCTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCAGCCCCTCAGTCTTGATTTTTGTTTTTCTTCAACTAGTCTGA  1050

seq1  TTTATATATGAG-CTATTTTGATTGCTTGTTTGCTTTGAGA  1089
      |||||||||||| ||||||||||||||||||||||| ||||
seq2  TTTATATATGAGCCTATTTTGATTGCTTGTTTGCTTGGAGA  1091