BAC Information

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BAC

Clone NameB6Ng01-261C18
Chromosome10 (Build37)
Map Location 98,427,786 - 98,428,913
singlet/doubletsinglet
Overlap geneAtp2b1
Upstream geneEG667438, EG432494
Downstream geneWdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261C18.bB6Ng01-261C18.g
ACCGA065907GA065908
length1,1231,159
definitionB6Ng01-261C18.b B6Ng01-261C18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctagatttccccatttgaagattatagctattcttgccctgt
gtcaggctacagctgttgtatttccataaaacctatgaacagtggtttag
ttagaagtgtcatttactttgggatatattttataggctaagtgtcctaa
atagagttgtgtgtcttctttatgacatcacctttctgacgtatcagctt
ccacttaaattttttttttcttaaacctttaaaatggaggatgaaatgtc
tttgaagaacaaagaggatcaaaatagacgatctggtttctattccgtat
tttatttgaaaccaaaattagtttgtctcttacgtgactatcactttaag
gctaacaaatacagcattttttgatgttgcccttggcatttttgtcagcc
actggcctaagggaatgaaggagtaaagaaagagacagcagtgggagcca
atggatgacctggaaggagaaggcagctgatgggtaactcgtaggtcagg
gctgaactagggagtctacttccgagactggctgctctgcgtttcagtgc
ttctcaacagccttttctcaagctgtttccttggtgtaatagaactgact
gtagtcatggactcgaacaaagctctggacccatccagtaattgcaaact
caacttataaaatcaatttcttgataagtggttggaaaaagcaaggacag
gacggactttacttattgtttaagccagggccttaaatgaggcctaggga
ggctcatgtccatcctgcatgcactcacctgtccatcatccatcctggtg
ggcctggccttccctgttggatcgtgtagtgcgcagtgatcatagtagcg
ctccgtgtttctcacagacttaaacacagtaagaggcaacaagctggtag
gtcacacagaggcagagcagaagtctccttgacagtctgttcccggtctc
attcccacttccgaagtaggaagaacatgggggccaatggttttctgtga
aacttagttcaaatttcgtaagccactagggaaaggctgttgagggaaca
acaaatccacaacagttctgtttatatgattgctgtatagatcatgtgtt
tggggtctttgactgccttatga
gaattctccttaaaaagggacggggtttcgttttctctctctcttgcttc
ttgctctcttgcttcttacacgcttgctcctgaagatgtaagaaataaag
ctttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtga
gaacgcgtctaataacaattggtgccgaaacccgggacgagaaaaaactc
gggactggcgcaaggaagatccctcattccagaaccagaactgcgggtca
cggtaataaaggttcccataaaacagactgttgagaaggattcaactaca
tgaattcagaacttttcagctggggaacggtggataccagtaagtatagc
tttacgaggtacgcctggccttgaactttctaacgaaattcaagacagtc
tatcagaagtaaagtgggaaatagctttacaaggtacgcctggccttaaa
ctttctaacgaaattcaggacagtctatcaaaagtaaagtggaaaatggc
tttacgaggtatgcttggccttaaactttctctagtgttagaagcccttt
tgttccttttcacatgttatcaagtgattaaggcagggctaaaaattcta
gatgaaattcaggacaatctatcagaagtaaagcggggagagagagtagg
agcaaagagaaaatatggttcacaaaataagtatacaggcctttccaagg
gtcttgaacctgagaaaaagtttaggtcaggtaagaatacctggagagag
attagaaggaaggagaaggaaaaaaaaaagaagaaagatcaattagcgga
ggtctctaagaaaaggagcctgtgctcatcgctggatgggctcggggagc
cagctcttagtagctctgaaacaggtgaagaatcctcctctgaggaaaca
gactgggaagaagagcagcccattaccagccagctaattagtcaagaaaa
aagccaaagcggctggcgatccagtttgctgatggcctcaggcagtcggc
ttcaggtcgccctatgcggagtccccgcctgcgtagtgcgtcagcagtgc
acagagagcagtgcgcagagaggccaatgcgccagactcattcattccca
gagaccatgatcaccggcatcccggactgaaggaccgaggtggttccgtt
tcaacggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98427786_98428913
seq2: B6Ng01-261C18.b_47_1169

seq1  GAATTCACCTAGATTTCCCCATTTGAAGATTATAGCTATTCTTGCCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAGATTTCCCCATTTGAAGATTATAGCTATTCTTGCCCTGT  50

seq1  GTCAGGCTACAGCTGTTGTATTTCCATAAAACCTATGAACAGTGGTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTACAGCTGTTGTATTTCCATAAAACCTATGAACAGTGGTTTAG  100

seq1  TTAGAAGTGTCATTTACTTTGGGATATATTTTATAGGCTAAGTGTCCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTGTCATTTACTTTGGGATATATTTTATAGGCTAAGTGTCCTAA  150

seq1  ATAGAGTTGTGTGTCTTCTTTATGACATCACCTTTCTGACGTATCAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTGTGTGTCTTCTTTATGACATCACCTTTCTGACGTATCAGCTT  200

seq1  CCACTTAAATTTTTTTTTTCTTAAACCTTTAAAATGGAGGATGAAATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAAATTTTTTTTTTCTTAAACCTTTAAAATGGAGGATGAAATGTC  250

seq1  TTTGAAGAACAAAGAGGATCAAAATAGACGATCTGGTTTCTATTCCGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGAACAAAGAGGATCAAAATAGACGATCTGGTTTCTATTCCGTAT  300

seq1  TTTATTTGAAACCAAAATTAGTTTGTCTCTTACGTGACTATCACTTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGAAACCAAAATTAGTTTGTCTCTTACGTGACTATCACTTTAAG  350

seq1  GCTAACAAATACAGCATTTTTTGATGTTGCCCTTGGCATTTTTGTCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAAATACAGCATTTTTTGATGTTGCCCTTGGCATTTTTGTCAGCC  400

seq1  ACTGGCCTAAGGGAATGAAGGAGTAAAGAAAGAGACAGCAGTGGGAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTAAGGGAATGAAGGAGTAAAGAAAGAGACAGCAGTGGGAGCCA  450

seq1  ATGGATGACCTGGAAGGAGAAGGCAGCTGATGGGTAACTCGTAGGTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGACCTGGAAGGAGAAGGCAGCTGATGGGTAACTCGTAGGTCAGG  500

seq1  GCTGAACTAGGGAGTCTACTTCCGAGACTGGCTGCTCTGCGTTTCAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACTAGGGAGTCTACTTCCGAGACTGGCTGCTCTGCGTTTCAGTGC  550

seq1  TTCTCAACAGCCTTTTCTCAAGCTGTTTCCTTGGTGTAATAGAACTGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACAGCCTTTTCTCAAGCTGTTTCCTTGGTGTAATAGAACTGACT  600

seq1  GTAGTCATGGACTCGAACAAAGCTCTGGACCCATCCAGTAATTGCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCATGGACTCGAACAAAGCTCTGGACCCATCCAGTAATTGCAAACT  650

seq1  CAACTTATAAAATCAATTTCTTGATAAGTGGTTGGAAAAAGCAAGGACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTATAAAATCAATTTCTTGATAAGTGGTTGGAAAAAGCAAGGACAG  700

seq1  GACGGACTTTACTTATTGTTTAAGCCAGGGCCTTAAATGAGGCCTAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGACTTTACTTATTGTTTAAGCCAGGGCCTTAAATGAGGCCTAGGGA  750

seq1  GGCTCATGTCCATCCTGCATGCACTCACCTGTCCATCATCCATCCTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGTCCATCCTGCATGCACTCACCTGTCCATCATCCATCCTGGTG  800

seq1  GGCCTGGCCTTCCCTGTTGGATCGTGTAGTGCGCAGTGATCATAGTAGCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGCCTTCCCTGTTGGATCGTGTAGTGCGCAGTGATCATAGTAGCG  850

seq1  CTCCGTGTTTCTCACAGACTTAAACACAGTAAGAGGCAACAAGCTGGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTGTTTCTCACAGACTTAAACACAGTAAGAGGCAACAAGCTGGTAG  900

seq1  GTCACACAGAGGCAGAGCAGAAGTCTCCTTGACAGTCTGTT-CCGGTCTC  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTCACACAGAGGCAGAGCAGAAGTCTCCTTGACAGTCTGTTCCCGGTCTC  950

seq1  ATTCCCACTTCCGAAGTAGGAAGAACAT-GGGGCCAATGGTTTTCTGTGG  998
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  ATTCCCACTTCCGAAGTAGGAAGAACATGGGGGCCAATGGTTTTCTGTGA  1000

seq1  AACTTAGTTCAAATTTCGTAAG-CACTAGGGAAAGGCTGTTGAGGGAACA  1047
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACTTAGTTCAAATTTCGTAAGCCACTAGGGAAAGGCTGTTGAGGGAACA  1050

seq1  ACCAAAATCCACAACAGTTTCTGTTTAATATTGATTTGCTTGTATAGATC  1097
      ||  ||||||||||||| |||||||| ||| ||| |||| ||||||||||
seq2  AC--AAATCCACAACAG-TTCTGTTT-ATA-TGA-TTGC-TGTATAGATC  1093

seq1  ATGTGTTTGGGGTTTTTTGACTGCTTTATGA  1128
      |||||||||||| | ||||||||| ||||||
seq2  ATGTGTTTGGGG-TCTTTGACTGCCTTATGA  1123