BAC Information

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BAC

Clone NameB6Ng01-261E15
Chromosome10 (Build37)
Map Location 91,781,241 - 91,782,337
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041799, LOC667203
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261E15.bB6Ng01-261E15.g
ACCGA065996GA065997
length1,1141,106
definitionB6Ng01-261E15.b B6Ng01-261E15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgtcctgctctggaacattcatatcttcattcatgtgcctgc
cccatagatgccaaataggaggacatctgtatagcttatgttttaatttc
ccgacttttccattagtatttactcatctgagaagatactctgtaggtga
tggtggagagaggaaaatcattactatggtacctaacccctaggtcttac
tgcctttcccctaaaaatccttcctttatgtcatcttgcggaaggttctg
caccaatcataacagaagaggcttagccggtatcggtatcgtaggcactc
ttcttttgcaccctgaactccactggaatttggaaagtggtaaacctgtt
gacaccaggactgaatttagaattatctggttctaaagtcattattctta
gtctaggccctgagctcaagggttcacgtgctagagataaacagaaaggg
agagaaggaagaagcagaagggaggacagagaaatagagggagggaaaga
ggaggagggagggtgcagaacaggcacatgcacacacacacacaagcatg
catacatacacacacatacacatgcacacacacacacacacacacacaca
cacacacacacacacgacatagaggatacataagggatcccaaattcaac
caccaggtgtcattgtacaaaaggattctctggtgtgtgtcacgcacaga
gggtaaatagaggcaagggcagatagactgcacaaagagcagaaacggca
gcaacttcacctggagcacagatgcagccagcggagctgacacgtatccg
ggacttccgctgggcttagagatgagttgagtatcaaatggaggagaaca
gatagtacagccttgctcacagactccaggtcagacatgtgatcccgcat
ggaggagtgggcgagcatcttccatagcacagtgggaaggaggccagatg
gctttgttgggatgtgccccatgtctcctttcgtccccagggacccttct
ctctggttaccaggactactgaagtttgatgcaagatgtgttgtccaatt
gacttaaattctgaggtaagcatgtcaacttatttcctttcattaacaat
tgaaggtgtttctg
gaattccatttgtagctagcttcctaaaatgggttctggtaccaactctt
ttggatcccctctcctcaagagacagacactgaggtaggaattttcaaat
gaacattattttggtgacttttcaggaggaatttgtcgaagaatgaggga
aacagggttgaagaaaggaaacagggggtgtgaggtaaatgtgttttaca
acaggttatgtgctgtgtagatttgtggctttgcactgatcttctaagtc
ctctttactggagttgaaacatctggacctttctagtcctcatcagctaa
ttacttgatacggtgtgcccacgaaaaaggacattccttgggaatggcac
ttggttttagtccaggacaatagaaggttttagctgaagatttgagatgt
aataatccaggcttctgggtttgtgggggaggtaacagcacctcttcact
caatgaccagggacatgttaaagatgctgtgctcatcatgacaggctttg
gaatgatcctatacagcttacttatgtttcttctctgtgagagaaagaaa
tctttgttgacatcaatctctgcgatgtcagcacttattttttaaccata
atttagccttttaaaccgaatatatcctctaaaggagtgtttgttcttat
tatttttaattcatctattctgtgagtaatatctgtaaataccacagaag
ggcagtgagatggattagtgattaaaagtgattgcttgccaacctggaca
actgaggtccatctccaaaactcacatatatgtggaagaagaagcacact
ctccaaagcttcccacatgtgctgtggtatgcacacactcatatccatgt
acacatatcacgtccacacaaccacaccactaactattacttacagatgt
aaagtaaataaataccacaggagaaggttatgatagacttcatgaagaga
tggtgaagtcagacactaaagctccatgatcatttctgcatgaaccacgt
cagcctgaggctactttattaaaatataatgttgttagacttcgatgatc
gcctgttgaagaaagacaattcgcatcttatatagactaaactgtagatg
aatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91781241_91782337
seq2: B6Ng01-261E15.g_65_1170 (reverse)

seq1  CATATTCATCTACATTTTAG-CTCT-TAAGA-GC-AAATGCCTTTC-TCA  45
      |||||||||||||| ||||| || | ||||| || || || ||||| |||
seq2  CATATTCATCTACAGTTTAGTCTATATAAGATGCGAATTGTCTTTCTTCA  50

seq1  --AGGGCATCATCCATG-CTAAC-ACAGTATATTTTAATAAAGTAGCCCC  91
        |||  |||||| | | ||||| ||| |||||||||||||||||||| |
seq2  ACAGGCGATCATCGAAGTCTAACAACATTATATTTTAATAAAGTAGCCTC  100

seq1  AGGCATGACGTGG-TCTTACAGAAAAAGAACATGGAGCTTT-GTGTCTGA  139
      |||| |||||||| || | ||| ||| || ||||||||||| ||||||||
seq2  AGGC-TGACGTGGTTCATGCAG-AAATGATCATGGAGCTTTAGTGTCTGA  148

seq1  CTTCACCATCTCTT-TTTAATGCTATCATAACCTTCTCTTGTGGTATTTA  188
      ||||||||||||||  | ||  |||||||||||||||| |||||||||||
seq2  CTTCACCATCTCTTCATGAAGTCTATCATAACCTTCTCCTGTGGTATTTA  198

seq1  TTTACTTTACATTTTTATGTTATTGTTAGTTGTGTGTTTGTGTGGACGTG  238
      |||||||||||| | || || || |||||| ||||| |||||||||||||
seq2  TTTACTTTACATCTGTAAGTAATAGTTAGTGGTGTGGTTGTGTGGACGTG  248

seq1  ATATGTGTACATGGATATGAGTGTGTGCATACCACAGCACATGTGGGAAG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTACATGGATATGAGTGTGTGCATACCACAGCACATGTGGGAAG  298

seq1  CTTTGGAGAGTCTGCTTTCTTCCTCCACATATATGTGAGTTTTGGAGATG  338
      ||||||||||| ||| |||||| |||||||||||||||||||||||||||
seq2  CTTTGGAGAGTGTGC-TTCTTCTTCCACATATATGTGAGTTTTGGAGATG  347

seq1  GACCTCAGTTGTCCAGGTTGGCAAGCAATCACTTTTAATCACTAATCCAT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAGTTGTCCAGGTTGGCAAGCAATCACTTTTAATCACTAATCCAT  397

seq1  CTCACTGCCCTTCTGTGGTATTTACAAATATTACTCACAGAATAGATGAA  438
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCACTGCCCTTCTGTGGTATTTACAGATATTACTCACAGAATAGATGAA  447

seq1  TTAAAAATAATAAGAACAAACACTCCTTTAGAGGATATATTCGGTTTAAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAATAAGAACAAACACTCCTTTAGAGGATATATTCGGTTTAAA  497

seq1  AGGCTAAATTATGGTTAAAAAATAAGTGCTGACATCGCAGAGATTGATGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAATTATGGTTAAAAAATAAGTGCTGACATCGCAGAGATTGATGT  547

seq1  CAACAAAGATTTCTTTCTCTCACAGAGAAGAAACATAAGTAAGCTGTATA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGATTTCTTTCTCTCACAGAGAAGAAACATAAGTAAGCTGTATA  597

seq1  GGATCATTCCAAAGCCTGTCATGATGAGCACAGCATCTTTAACATGTCCC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATTCCAAAGCCTGTCATGATGAGCACAGCATCTTTAACATGTCCC  647

seq1  TGGTCACTGAGTGAAGAGGTGCTGTTACCTCCCCCACAAACCCAGAAGCC  688
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATTGAGTGAAGAGGTGCTGTTACCTCCCCCACAAACCCAGAAGCC  697

seq1  TGGATTATTACATCTCAAATCTTCAGCTAAAACCTTCTATTGTCCTGGAC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTATTACATCTCAAATCTTCAGCTAAAACCTTCTATTGTCCTGGAC  747

seq1  TAAAACCAAGTGCCATTCCCAAGGAATGTCCTTTTTCGTGGGCACACCGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAAGTGCCATTCCCAAGGAATGTCCTTTTTCGTGGGCACACCGT  797

seq1  ATCAAGTAATTAGCTGATGAGGACTAGAAAGGTCCAGATGTTTCAACTCC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTAATTAGCTGATGAGGACTAGAAAGGTCCAGATGTTTCAACTCC  847

seq1  AGTAAAGAGGACTTAGAAGATCAGTGCAAAGCCACAAATCTACACAGCAC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGAGGACTTAGAAGATCAGTGCAAAGCCACAAATCTACACAGCAC  897

seq1  ATAACCTGTTGTAAAACACATTTACCTCACACCCCCTGTTTCCTTTCTTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGTTGTAAAACACATTTACCTCACACCCCCTGTTTCCTTTCTTC  947

seq1  AACCCTGTTTCCCTCATTCTTCGACAAATTCCTCCTGAAAAGTCACCAAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTTTCCCTCATTCTTCGACAAATTCCTCCTGAAAAGTCACCAAA  997

seq1  ATAATGTTCATTTGAAAATTCCTACCTCAGTGTCTGTCTCTTGAGGAGAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTCATTTGAAAATTCCTACCTCAGTGTCTGTCTCTTGAGGAGAG  1047

seq1  TGGATCCAAAAGAGTTGGTACCAGAACCCATTTTAGGAAGCTAGCTACAA  1088
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCAAAAGAGTTGGTACCAGAACCCATTTTAGGAAGCTAGCTACAA  1097

seq1  ATGGAATTC  1097
      |||||||||
seq2  ATGGAATTC  1106