BAC Information

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BAC

Clone NameB6Ng01-262F17
Chromosome10 (Build37)
Map Location 38,098,302 - 38,099,446
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040915, Lama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262F17.bB6Ng01-262F17.g
ACCGA066796GA066797
length1,1421,195
definitionB6Ng01-262F17.b B6Ng01-262F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattccaaataatttatgtgtatgttctactttcatggtgaaagagct
gtcatatgctagctatgtataatgacatccagggcactatgttcaaatac
agatgagactaggagagtagctttgcattgggaaaacctgagagatgcta
caaggtcagataactacagtggacattaaatatggtaaatcatgttgata
tgtatatatcactagtatgtgatcaaaaatgaaactgtatctgcggtctt
tgttctcaaaacacttaactctagtataatcatgaggtaaaaatagaaat
tctggtcaaaggtaatttttcaaaagtacatcaatatcatttctcagaac
tgttataataataaacaaacaaacaaacaaacaaaccaaacaaacaaagc
taagaactatcacagaaaggagtgtaaggatacacagtagctattaggtc
ataaaatctccattgagaaagtaaaaaagcatatggggtaaaaagctaaa
aaaaatggccatcacatatagaagtagaatgtcatctggaagtctgttaa
tgaaaataccaaacgtaagtaaagacatagtctacagaataggatattaa
aaattgcataatacaatagatacatcaactaatgaaataaacaatacctc
aaaattgaaatacaaatgaccaaaaagcacatgtgagaatattgaactta
actagctgtggtaggcagtttgaatagaaatggcctccataagctcatat
attttactacttaggattaggatgtgtggccttgttggagaaagtgtgtt
actgaaaatgggctttgagttttttgatacattttgaaccaatttttata
caggagaagaaatatacgaggtataacttttgttttcttatattcattag
tatttgactttttaagaattaaaacaaaaatattaaaatacaaataaagc
acaagaacaagtttttatagacacagtgttgcattgatgtcacatatcat
gtcatgtagtctccagaaaagtcactgttgctttcaaagggaaatgaaag
tgactttttgatataaaaataaagctctttgactatgatataccttctat
tcaatagactgtttaatgtctgttgactgtttggggcttagg
gaattcaaggcccataactaaacatgataaaagcaatcgacagtaaacca
gtagccaacatcaaaataaatggtgagaagctggaagcaatcccactaaa
atcagacactagactaggatgctcactttctccctgcctattcaacatta
cttgaaaacatgtacttgaaagcctagccagagcaatttgacaacaaaag
gagatcaaggggatacaaattggaaagaaaaaagtcaaaatatcactttt
tgcagatgatatgatagtatatataagtgaccctaaaaattccaccagag
aactcctaaacctgataaacagcttcaatgaagtagctggatataaaatt
aactcaaacaagtcaatggcctttctgtacacaaaggataaacaggctga
gaaggaaattatggaaacaacacccttctcaatagtcacaaatagtataa
aataacttttatattattatattatattatattatattatattatattat
attatatcatgactctaaggaagtgaaagatctgtatgataagaacttca
agtctctggagaaagaaattaaagtagatgtcagaagatggaaaggtctc
ccatgataatggatcggcaggatcaatatagtaaaaatggctatcttgcc
aaaagcaatctacagattcaatgcaatccccatcaaaattccaactcaac
tcttcaacgaattagaaaggtcagtctgcaaattcatctggaataacaaa
aaacctaggatagcaaaaactcttctcaagaactaataaacctctggtgg
aatcaccatgcctgacttaaagctgtactacaatacaattgtgataaaaa
ctgcatgttactggtatagagacagtcaggtagacccttggaatagaatt
gaagacccagaaatgaactccacacacctatggtcacttgatcttcgaca
agagaacaaaaacaatccagtggaaaaaagacagcatttccacaaatggt
tctgcacaattggtggtatcatgtagaagaatgatttgatcatcctatct
ctgtactaaggtcaaatctgatggatagacctccacataaaatcagagaa
cctgaaactatgaggagaaatgttacgcaagcctcagaaatccgttcaca
gggtaattctcttgtaaatgaaacagcccacatgcgcctgtggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38098302_38099446
seq2: B6Ng01-262F17.b_48_1188 (reverse)

seq1  CCTAAGCCCCAAACAGTC-ACAGACCAATTTAACAGTCTATTGAATTAGA  49
      |||||||||||||||||| ||||||  ||| |||||||||||||| ||||
seq2  CCTAAGCCCCAAACAGTCAACAGAC--ATTAAACAGTCTATTGAA-TAGA  47

seq1  A-GTATATCATAGTCAAAGAGCTTTA-TTTTATATCAAAAAGTCACTTTC  97
      | |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGGTATATCATAGTCAAAGAGCTTTATTTTTATATCAAAAAGTCACTTTC  97

seq1  ATTTCCTTTTGAAAGCAACAGTTGACTTTTCTGGAGACTACATGACATGA  147
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTTCCCTTTGAAAGCAACAG-TGACTTTTCTGGAGACTACATGACATGA  146

seq1  TATGTGACATCAATGCAACACTGTTGTCTTATAAAACTTGTTCTTGTGGC  197
      ||||||||||||||||||||||| |||||   ||||||||||||||| ||
seq2  TATGTGACATCAATGCAACACTG-TGTCTATAAAAACTTGTTCTTGT-GC  194

seq1  TTTATTTGTATTTTAATATTTTTGTTTTTAATTCTTAAAAAGTCAAATAC  247
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTATTTGTATTTTAATATTTTTG-TTTTAATTCTTAAAAAGTCAAATAC  243

seq1  TAATGAATATAAGAAAACAAAAGTTATACCTCGTATATTTCTTCTCCTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATATAAGAAAACAAAAGTTATACCTCGTATATTTCTTCTCCTGT  293

seq1  ATAAAAATTGGTTCAAAATGTATCAAAAAACTCAAAGCCCATTTTCAGTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTGGTTCAAAATGTATCAAAAAACTCAAAGCCCATTTTCAGTA  343

seq1  ACACACTTTCTCCAACAAGGCCACACATCCTAATCCTAAGTAGTAAAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTTCTCCAACAAGGCCACACATCCTAATCCTAAGTAGTAAAATA  393

seq1  TATGAGCTTATGGAGGCCATTTCTATTCAAACTGCCTACCACAGCTAGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCTTATGGAGGCCATTTCTATTCAAACTGCCTACCACAGCTAGTT  443

seq1  AAGTTCAATATTCTCACATGTGCTTTTTGGTCATTTGTATTTCAATTTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAATATTCTCACATGTGCTTTTTGGTCATTTGTATTTCAATTTTG  493

seq1  AGGTATTGTTTATTTCATTAGTTGATGTATCTATTGTATTATGCAATTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTGTTTATTTCATTAGTTGATGTATCTATTGTATTATGCAATTTT  543

seq1  TAATATCCTATTCTGTAGACTATGTCTTTACTTACGTTTGGTATTTTCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCCTATTCTGTAGACTATGTCTTTACTTACGTTTGGTATTTTCAT  593

seq1  TAACAGACTTCCAGATGACATTCTACTTCTATATGTGATGGCCATTTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGACTTCCAGATGACATTCTACTTCTATATGTGATGGCCATTTTTT  643

seq1  TTAGCTTTTTACCCCATATGCTTTTTTACTTTCTCAATGGAGATTTTATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTTTACCCCATATGCTTTTTTACTTTCTCAATGGAGATTTTATG  693

seq1  ACCTAATAGCTACTGTGTATCCTTACACTCCTTTCTGTGATAGTTCTTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATAGCTACTGTGTATCCTTACACTCCTTTCTGTGATAGTTCTTAG  743

seq1  CTTTGTTTGTTTGGTTTGTTTGTTTGTTTGTTTGTTTATTATTATAACAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTGTTTGGTTTGTTTGTTTGTTTGTTTGTTTATTATTATAACAG  793

seq1  TTCTGAGAAATGATATTGATGTACTTTTGAAAAATTACCTTTGACCAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAAATGATATTGATGTACTTTTGAAAAATTACCTTTGACCAGAA  843

seq1  TTTCTATTTTTACCTCATGATTATACTAGAGTTAAGTGTTTTGAGAACAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTTACCTCATGATTATACTAGAGTTAAGTGTTTTGAGAACAA  893

seq1  AGACCGCAGATACAGTTTCATTTTTGATCACATACTAGTGATATATACAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGCAGATACAGTTTCATTTTTGATCACATACTAGTGATATATACAT  943

seq1  ATCAACATGATTTACCATATTTAATGTCCACTGTAGTTATCTGACCTTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATGATTTACCATATTTAATGTCCACTGTAGTTATCTGACCTTGT  993

seq1  AGCATCTCTCAGGTTTTCCCAATGCAAAGCTACTCTCCTAGTCTCATCTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTCTCAGGTTTTCCCAATGCAAAGCTACTCTCCTAGTCTCATCTG  1043

seq1  TATTTGAACATAGTGCCCTGGATGTCATTATACATAGCTAGCATATGACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAACATAGTGCCCTGGATGTCATTATACATAGCTAGCATATGACA  1093

seq1  GCTCTTTCACCATGAAAGTAGAACATACACATAAATTATTTGGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCACCATGAAAGTAGAACATACACATAAATTATTTGGAATTC  1141