BAC Information

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BAC

Clone NameB6Ng01-262F18
Chromosome10 (Build37)4 (Build37)
Map Location 45,691,936 - 45,692,5374,495,766 - 4,496,878
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364, Hace1, LOC664781
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262F18.bB6Ng01-262F18.g
ACCGA066798GA066799
length6961,091
definitionB6Ng01-262F18.b B6Ng01-262F18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(45,691,936 - 45,692,537)(4,495,766 - 4,496,878)
sequence
gaattctgtcggtcataaacttaataattaatacacttctgacaggattg
agtgctatagattggttataactgaatagaattaaatagcagtagtcaag
acaggataggaaagagaatcttaggtaactgacaggttgtgtgggtagag
agaagtatatttttgtattagcaaagaaacatttggctaggactagaata
agaaagctggcagcagtggcataagatcgtggtgacataaaatgagtttg
tctaggtaagttcatgcctgtgccacaaactgagcatggaggccataaga
acaggccatgagtctaggggactttttccatttaccagactgctggcagt
atgtgtgaagatctcttaaaatatacatttgaagacaatttagtattcac
tgggtgatggggatgttactgaactattcatactggtgtcccaagaagag
tttagcaacgtgtcagtcaaactagaagttcaggtcatcacgtgaataac
tagaggctacagctgcaattttcctggaaatcaccagaaagcaattcatc
ctggtaccaggaattttcagccagctgcaagaactcaaggggtttatgaa
ctgctttcaagaatggaaggaaatcacccaaaggtctaagtcctagagcg
aggtggggagagcagcagaatccaggcctggcctggaattctcagc

gaattcagtctagctctgttttgtgtgaggaatatgttagtggtgtggac
tgacatagaaagttatgtggagagagaattactctcataaatgtatatgt
gaggcaattctccttaagaatccatggtcagaattgaattaaagatttgt
ggacagaattgagatttgtcaatagggatgtagctcctgaagccaggaga
aaaagcatggagacagagaataaacaggatctcaaagacccatccacatt
caggaatcaggggagtgttgctatggtgttttcatatctgttagtattct
ttagtttattttttcccagtctacttttataccattttaaatacatgcaa
ataataaggtcagttctagatcagggaacaaacaagccaaaaaccacaaa
taatcaaagaaaaaaaacaaggcattaaacaaagttccataatcactgtt
tctaggggcttatcaggatgtccaagataaaaagaacgccacacatccaa
aaactggatttaccttgagctttgtaatagcccaaatgtaaatattctta
tctgagccaacttccatgtcctagcccaatgtcaaattcttgccctattt
ctagaatcaaccccaaaagctctccacaaagctacaagctcagatcttcc
ctcttacaaaggcactaatgcttctgttaagctgtctgcataggctgatc
aactgacaaaagttcactgactatggagagtttggaaagttgctgaactg
gaagtctaattataattcttgggctacttttagcctcccaaagatttgtt
ctttgcctacctctgtatcacacctaacaccctgaataaacaaagtcctt
tggaatgtattaactgaaaacaaaacaaaaccaaaaatcctgttctctac
caacagaaggctgatacatttgaagcctgtaggaaagatttcttgtcttg
ctgttacctgcctctctgatgtttccaatgattatttttaaatgcctgat
ataaatttcttgggttggtactataaatcatcactacttctgtgagattt
atattggagtctaaatatatgtgcttggcctattatcactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45691936_45692537
seq2: B6Ng01-262F18.b_60_744

seq1  GTCATAAACTCAATAATTAACAAACTTCTAACAGGTTTGAGTGCAATATA  50
      |||||||||| ||||||||| | |||||| ||||| ||||||||  ||||
seq2  GTCATAAACTTAATAATTAATACACTTCTGACAGGATTGAGTGC--TATA  48

seq1  GA-TGGTTATAACGGAATAGAATTTAATAGCAGTAGTAAAAATCTATCAA  99
      || |||||||||| |||||||||| |||||||||||          ||||
seq2  GATTGGTTATAACTGAATAGAATTAAATAGCAGTAG----------TCAA  88

seq1  GATGGGATAGGAAAG-GAATCTTAGGTAACTTTAACAGGTTGTGTAGGTA  148
      ||  ||||||||||| ||||||||||||||  | ||||||||||| ||||
seq2  GACAGGATAGGAAAGAGAATCTTAGGTAAC--TGACAGGTTGTGTGGGTA  136

seq1  GAGAAAAGTACATTGTTGTATTAGCAAAGAGACATATGGCTAGGACTAGA  198
      |||| ||||| ||| ||||||||||||||| |||| ||||||||||||||
seq2  GAGAGAAGTATATTTTTGTATTAGCAAAGAAACATTTGGCTAGGACTAGA  186

seq1  ATAAGAGCTAACTAACAGCTGTGGCCTGAGATC----------AAACTGT  238
      ||||||   | ||  |||| ||||| | |||||          ||| || 
seq2  ATAAGA--AAGCTGGCAGCAGTGGCATAAGATCGTGGTGACATAAAATG-  233

seq1  ACTGGCAGCCTAGCT--GGGAATGGCT-------AAATTG----TGGAG-  274
         |   | |||| |  |   ||| ||       ||| ||    ||||| 
seq2  --AGTTTGTCTAGGTAAGTTCATGCCTGTGCCACAAACTGAGCATGGAGG  281

seq1  -CA-AGGGGCTGGC--TG-GT---GTGCAC-----------AGCTGGCTG  305
       || | |  | |||  || ||   | | ||           | | | |||
seq2  CCATAAGAACAGGCCATGAGTCTAGGGGACTTTTTCCATTTACCAGACTG  331

seq1  CCCACAG-----GTCATGGCCCC----------------AGGGCCAGTGA  334
      |   |||     || | |  | |                | | | | | |
seq2  CTGGCAGTATGTGTGAAGATCTCTTAAAATATACATTTGAAGACAATTTA  381

seq1  GT----------TGGAGGAGA----ACTGTGCTATGGGCCAGTGGCGGCT  370
      ||          ||  || ||    ||||  ||||     | ||| | | 
seq2  GTATTCACTGGGTGATGGGGATGTTACTGAACTAT-TCATACTGGTGTCC  430

seq1  GAAGCAGAG-ACAGCAGACTGGCCAGTCAGACCTGTGTTGCTGCT----A  415
       ||| ||||   |||| ||  | |||||| ||  |   | | | |    |
seq2  CAAGAAGAGTTTAGCA-ACGTGTCAGTCAAACTAGAAGTTCAGGTCATCA  479

seq1  GGT--AGGACTTCCTGCTAGCAGCCTGAA--GTCCAGG-----CCCAG--  454
       ||  |  |||    |||| ||||   ||   ||| ||      ||||  
seq2  CGTGAATAACTAGAGGCTA-CAGCTGCAATTTTCCTGGAAATCACCAGAA  528

seq1  ---AGTTCATGGTGG-GTGGGGAAAAGTAAG--GGCCCAAAGTA-GCAA-  496
         | |||||  |||     ||||   | ||   ||   ||| |  ||| 
seq2  AGCAATTCATCCTGGTACCAGGAATTTTCAGCCAGCTGCAAGAACTCAAG  578

seq1  --GTTTCTTA--TCCTAGCAAGGCACTTGTGG--------CTGCAGGGCA  534
        |||| | |  | ||  ||||  | | |  |        |   ||| | 
seq2  GGGTTTATGAACTGCTTTCAAG--AATGGAAGGAAATCACCCAAAGGTCT  626

seq1  AAGTGTTAGCAGAGCGAGGTGGAGGAGGGCAGCAGAATCCAGGCCTGGGC  584
      ||||  |   |||||||||||| |||| ||||||||||||||||     |
seq2  AAGTCCT---AGAGCGAGGTGG-GGAGAGCAGCAGAATCCAGGC-----C  667

seq1  TGGCCTGGAATTCTCAGC  602
      ||||||||||||||||||
seq2  TGGCCTGGAATTCTCAGC  685


seq1: chr4_4495766_4496878
seq2: B6Ng01-262F18.g_68_1158

seq1  GAATTCAGTCTAGCTCTGTTTTGTGTGAGGAATATGTTAGTGGTGTGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTAGCTCTGTTTTGTGTGAGGAATATGTTAGTGGTGTGGAC  50

seq1  TGACATAGAAAGTTATGTGGAGAGAGAATTACTCTCATAAATGTATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGAAAGTTATGTGGAGAGAGAATTACTCTCATAAATGTATATGT  100

seq1  GAGGCAATTCTCCTTAAGAATCCATGGTCAGAATTGAATTAAAGATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAATTCTCCTTAAGAATCCATGGTCAGAATTGAATTAAAGATTTGT  150

seq1  GGACAGAATTGAGATTTGTCAATAGGGATGTAGCTCCTGAAGCCAGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAATTGAGATTTGTCAATAGGGATGTAGCTCCTGAAGCCAGGAGA  200

seq1  AAAAGCATGGAGACAGAGAATAAACAGGATCTCAAAGACCCATCCACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGGAGACAGAGAATAAACAGGATCTCAAAGACCCATCCACATT  250

seq1  CAGGAATCAGGGGAGTGTTGCTATGGTGTTTTCATATCTGTTAGTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCAGGGGAGTGTTGCTATGGTGTTTTCATATCTGTTAGTATTCT  300

seq1  TTAGTTTATTTTTTCCCAGTCTACTTTTATACCATTTTAAATACATGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTATTTTTTCCCAGTCTACTTTTATACCATTTTAAATACATGCAA  350

seq1  ATAATAAGGTCAGTTCTAGATCAGGGAACAAACAAGCCAAAAACCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGGTCAGTTCTAGATCAGGGAACAAACAAGCCAAAAACCACAAA  400

seq1  TAATCAAAGAAAAAAAACAAGGCATTAAACAAAGTTCCATAATCACTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAAGAAAAAAAACAAGGCATTAAACAAAGTTCCATAATCACTGTT  450

seq1  TCTAGGGGCTTATCAGGATGTCCAAGATAAAAAGAACGCCACACATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGGCTTATCAGGATGTCCAAGATAAAAAGAACGCCACACATCCAA  500

seq1  AAACTGGATTTACCTTGAGCTTTGTAATAGCCCAAATGTAAATATTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGATTTACCTTGAGCTTTGTAATAGCCCAAATGTAAATATTCTTA  550

seq1  TCTGAGCCAACTTCCATGTCCTAGCCCAATGTCAAATTCTTGCCCTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCAACTTCCATGTCCTAGCCCAATGTCAAATTCTTGCCCTATTT  600

seq1  CTAGAATCAACCCCAAAAGCTCTCCACAAAGCTACAAGCTCAGATCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATCAACCCCAAAAGCTCTCCACAAAGCTACAAGCTCAGATCTTCC  650

seq1  CTCTTACAAAGGCACTAATGCTTCTGTTAAGCTGTCTGCATAGGCTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAAAGGCACTAATGCTTCTGTTAAGCTGTCTGCATAGGCTGATC  700

seq1  AACTGACAAAAGTTCACTGACTATGGAGAGTTTGGAAAGTTGCTGAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACAAAAGTTCACTGACTATGGAGAGTTTGGAAAGTTGCTGAACTG  750

seq1  GAAGTCTAATTATAATTCTTGGGCTACTTTTAGCCTCCCAAAGATTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTAATTATAATTCTTGGGCTACTTTTAGCCTCCCAAAGATTTGTT  800

seq1  CTTTGCCTACCTCTGTATCACACCTAACACCCTGAATAAACAAAGTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTACCTCTGTATCACACCTAACACCCTGAATAAACAAAGTCCTT  850

seq1  TGGAATGTATTAACTGAAAACAAAACAAAACCAAAAATCCTGTTCTCTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTATTAACTGAAAACAAAACAAAACCAAAAATCCTGTTCTCTAC  900

seq1  CAACAGAAGGGCTGATAACATTTGAAGCCTGTAGGAAAGATTTCTTGTCT  950
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  CAACAGAA-GGCTGAT-ACATTTGAAGCCTGTAGGAAAGATTTCTTGTCT  948

seq1  TGCTGTTACCTGCCTCTCTGATGTTTCCAATGATTTATTTTTAAAATTGC  1000
      ||||||||||||||||||||||||||||||||| |||||||||||  |||
seq2  TGCTGTTACCTGCCTCTCTGATGTTTCCAATGA-TTATTTTTAAA--TGC  995

seq1  CTTGAATTATAAATTTCTTTGGTTTGTTACTATAAAATTCCATGGAACTA  1050
      | |||  |||||||||| |||| ||| |||||||||    |||   ||||
seq2  C-TGA--TATAAATTTC-TTGGGTTGGTACTATAAA---TCAT--CACTA  1036

seq1  CCTTCCTGTTGGAGATTTATATTTGGGAAGTCCTAAATATATGTGCCTGG  1100
      |  | ||||  ||||||||||||   | ||| |||||||||||||| |||
seq2  C--TTCTGT--GAGATTTATATT---GGAGT-CTAAATATATGTGCTTGG  1078

seq1  GCTATTATCACTC  1113
       ||||||||||||
seq2  CCTATTATCACTC  1091


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