BAC Information

Click to search

BAC

Clone NameB6Ng01-263G01
Chromosome10 (Build37)
Map Location 119,896,923 - 120,048,834
singlet/doubletdoublet
Overlap geneHmga2
Upstream geneGrip1, Helb, Irak3, Tmbim4, 1190005P17Rik
Downstream geneLOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263G01.bB6Ng01-263G01.g
ACCGA067562GA067563
length317698
definitionB6Ng01-263G01.b B6Ng01-263G01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,896,923 - 119,897,239)(120,048,139 - 120,048,834)
sequence
aactgttggaagaggagtcatccctgcatagagcacaagcccgtttccta
tggggactgctgtggtttacttctgcatacaaacttcccaggaagtaagg
cctcgctatgactgatcgcacaagtcaccagcagaagatatccaagcaaa
gaggaaacacgttgtctagaaaaaatataccatttcctttgatttcctct
cctaagtggagggactcttcttccaagaccagatcagggacttgctaacc
acaaaacattccattcttccagccaggaaaaatgagagaccaggtaagtc
aatggggtggggggggg
gaattccaggacagccagagctacacagagaaaccctgtctcaaaaaacc
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaaatcctccacc
aaaaaaattttgggctggtgagatggctcagtgggttagagcacccgatt
gctcttccgaaggtccagagttcaaatcccagcaaccacatggtggctca
caaccatccgtaacgagatctgactccctcttctggagtatctgaagaca
gctacaatgttcttacatataataaataaataaatctttaaaaaaaaaaa
aaaaagaaagaaagaagcccctcaggcttgagggggggaaacataggatt
aaatttaggcatagaaaggtgagtgacagctgggcgtggcagcgcccagc
atttgggaggcaaaggcaggtggatttctgagttcgaggccagcctggtc
tacagagtgagttccaggacagccaaagctatacagaaaaaccctgtctc
aaaaaaaaaaaaaaaaaaaaaaaaaaaaccaaaacaaaacaaaaacgaaa
ggtgagtgactaaaaaactcaaaaccgatcaaccaaaaccaagtgggttg
atcagatggatctaacggttgacaaaagggtttgtgcctctgtcagatta
ttttaattacttggagtcctgaaatcccattccccaaccccagtcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119896923_119897239
seq2: B6Ng01-263G01.b_50_366

seq1  AACTGTTGGAAGAGGAGTCATCCCTGCATAGAGCACAAGCCCGTTTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTGGAAGAGGAGTCATCCCTGCATAGAGCACAAGCCCGTTTCCTA  50

seq1  TGGGGACTGCTGTGGTTTACTTCTGCATACAAACTTCCCAGGAAGTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACTGCTGTGGTTTACTTCTGCATACAAACTTCCCAGGAAGTAAGG  100

seq1  CCTCGCTATGACTGATCGCACAAGTCACCAGCAGAAGATATCCAAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCTATGACTGATCGCACAAGTCACCAGCAGAAGATATCCAAGCAAA  150

seq1  GAGGAAACACGTTGTCTAGAAAAAATATACCATTTCCTTTGATTTCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACACGTTGTCTAGAAAAAATATACCATTTCCTTTGATTTCCTCT  200

seq1  CCTAAGTGGAGGGACTCTTCTTCCAAGACCAGATCAGGGACTTGCTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTGGAGGGACTCTTCTTCCAAGACCAGATCAGGGACTTGCTAACC  250

seq1  ACAAAACATTCCATTCTTCCAGCCAGGAAAAATGAGAGACCAGGTAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACATTCCATTCTTCCAGCCAGGAAAAATGAGAGACCAGGTAAGTC  300

seq1  AATGGGGTGGGGGGGGG  317
      |||||||||||||||||
seq2  AATGGGGTGGGGGGGGG  317

seq1: chr10_120048139_120048834
seq2: B6Ng01-263G01.g_68_765 (reverse)

seq1  GTTGACTGGGGTTGGGGAAT-GGATTTCAGGACT-CAAGTAATAAAAATA  48
      |||||||||||||||||||| ||||||||||||| |||||||| ||||||
seq2  GTTGACTGGGGTTGGGGAATGGGATTTCAGGACTCCAAGTAATTAAAATA  50

seq1  ATCAGACAGAGGCACAAACCCTTTTGTCAACCGTTAGATCCATCTGATCA  98
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACAGAGGCACAAACCCTTTTGTCAACCGTTAGATCCATCTGATCA  100

seq1  ACCCACTTGGTTTTGGTTGATCGGTTTTGAGTTTTTTAGTCACTCACCTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTTGGTTTTGGTTGATCGGTTTTGAGTTTTTTAGTCACTCACCTT  150

seq1  TCGTTTTTGTTTTGTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTTGTTTTGTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA  200

seq1  GACAGGGTTTCTCTGTATAGCTTTGGCTGTCCTGGAACTCACTCTGTAGA  248
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTTTCTGTATAGCTTTGGCTGTCCTGGAACTCACTCTGTAGA  250

seq1  CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAATGC  298
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTTTGCCTCCCAAATGC  300

seq1  TGGGCGCTGCCACGCCCAGCTGTCACTCACCTTTCTATGCCTAAATTTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGCTGCCACGCCCAGCTGTCACTCACCTTTCTATGCCTAAATTTAA  350

seq1  TCCTATGTTTCCCCCCCTCAAGCCTGAGGGGCTTCTTTCTTTCTTTTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTTTCCCCCCCTCAAGCCTGAGGGGCTTCTTTCTTTCTTTTTTT  400

seq1  TTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGAACATTGTAGCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGAACATTGTAGCTG  450

seq1  TCTTCAGATACTCCAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGATACTCCAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTG  500

seq1  AGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAA  550

seq1  TCGGGTGCTCTAACCCACTGAGCCATCTCACCAGCCCAAAATTTTTTTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTGCTCTAACCCACTGAGCCATCTCACCAGCCCAAAATTTTTTTGG  600

seq1  TGGAGGATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG  650

seq1  TTTTTTGAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTC  698