BAC Information

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BAC

Clone NameB6Ng01-263M19
Chromosome10 (Build37)
Map Location 45,217,893 - 45,218,842
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546476, 4930431F10Rik, LOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b
Downstream geneDbil5-ps, LOC100042364, Hace1, LOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263M19.g
ACCGA067874
length961
definitionB6Ng01-263M19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactttgtttaaaaaaaaatagaccacatgaaattgagaggtaaa
agtattggaagagataggagagcagttacggaaaagaaatggggatagat
ttagtcaaaacacattatacgtatgtatgaaattctcaatcagtaaaagg
agaaaaaataaacaaaaccccctttcacaatattgtcataattttgagga
aaaccactaagttctttaagtggaacagggagtgacagaggtgtccctga
gctcttgtagttttttgttgttgttgttgttttgtttgtttggttggttg
gtttttcgagacagggtttctctgtgtagccctggctgtcctggaactca
ctttgtagaccaggctggcctccaactcagaaatccacctgcctctgcct
gccaagtgctgggattaaaggcgtgcgctgccaccaccgccccgctgagc
gcttgtgttttttaaagatcccaattgagagtgttaatgagggtcaacag
tatatgctggacatctgcattctgactagtcaacataaacttctggaacc
atgttattatttcccattgactagttctccagaattaattcatataatta
atcatgattctatgtgatataatgaatctcttcaggaaggtggattcttt
agcaaaatggatggggtaaggaagctgctatgttattttatctgtatccc
tttttattattattaggagagaggacagaaattaagagcagtactcagag
acacaaactgcttgtacatttattctccctagaacaaccttctttgtaga
tgtcaagttaattttatttaggtacacattttaagaaatagttactttga
acacacatgcacacacacgcgcacacatacacacacacacacaggtaaac
atgcacacacacacgcacacacacacacacacacacacacacacacacac
agacccccaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45217893_45218842
seq2: B6Ng01-263M19.g_66_1016 (reverse)

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGCA  50

seq1  TGTTTACCTGTGTGTGTGTGTGTATGTGTGCGCGTGTGTGTGCATGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTGTGTGTGTGTGTGTATGTGTGCGCGTGTGTGTGCATGTGTG  100

seq1  TTCAAAGTAACTATTTCTTAAAATGTGTACCTAAATAAAATTAACTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTAACTATTTCTTAAAATGTGTACCTAAATAAAATTAACTTGAC  150

seq1  ATCTAC-AAGAAGGTTGTTCTAGGGAGAATAAATGTACAAGCAGTTTGTG  199
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAAAGAAGGTTGTTCTAGGGAGAATAAATGTACAAGCAGTTTGTG  200

seq1  TCTCTGAGTACTGCTCTTAATTTCTGTCCTCTCTCCTAATAATAATAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGTACTGCTCTTAATTTCTGTCCTCTCTCCTAATAATAATAAAA  250

seq1  AGGGATACAGATAAAATAACATAGCAGCTTCCTTACCCCATCCATTTTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATACAGATAAAATAACATAGCAGCTTCCTTACCCCATCCATTTTGC  300

seq1  TAAAGAATCCACCTTCCTGAAGAGATTCATTATATCACATAGAATCATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATCCACCTTCCTGAAGAGATTCATTATATCACATAGAATCATGA  350

seq1  TTAATTATATGAATTAATTCTGGAGAACTAGTCAATGGGAAATAATAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATATGAATTAATTCTGGAGAACTAGTCAATGGGAAATAATAACA  400

seq1  TGGTTCCAGAAGTTTATGTTGACTAGTCAGAATGCAGATGTCCAGCATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCAGAAGTTTATGTTGACTAGTCAGAATGCAGATGTCCAGCATAT  450

seq1  ACTGTTGACCCTCATTAACACTCTCAATTGGGATCTTTAAAAAACACAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGACCCTCATTAACACTCTCAATTGGGATCTTTAAAAAACACAAG  500

seq1  CGCTCAGCGGGGCGGTGGTGGCAGCGCACGCCTTTAATCCCAGCACTTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAGCGGGGCGGTGGTGGCAGCGCACGCCTTTAATCCCAGCACTTGG  550

seq1  CAGGCAGAGGCAGGTGGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAGGCAGGTGGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAA  600

seq1  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAA  650

seq1  CCAACCAACCAAACAAACAAAACAACAACAACAACAAAAAACTACAAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAACCAAACAAACAAAACAACAACAACAACAAAAAACTACAAGAG  700

seq1  CTCAGGGACACCTCTGTCACTCCCTGTTCCACTTAAAGAACTTAGTGGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGACACCTCTGTCACTCCCTGTTCCACTTAAAGAACTTAGTGGTT  750

seq1  TTCCTCAAAATTATGACAATATTGTGAAAGGGGGTTTTGTTTATTTTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAAATTATGACAATATTGTGAAAGGGGGTTTTGTTTATTTTTTC  800

seq1  TCCTTTTACTGATTGAGAATTTCATACATACGTATAATGTGTTTTGACTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTACTGATTGAGAATTTCATACATACGTATAATGTGTTTTGACTA  850

seq1  AATCTATCCCCATTTCTTTTCCGTAACTGCTCTCCTATCTCTTCCAATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATCCCCATTTCTTTTCCGTAACTGCTCTCCTATCTCTTCCAATAC  900

seq1  TTTTACCTCTCAATTTCATGTGGTCTATTTTTTTTTAAACAAAGTGAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTCTCAATTTCATGTGGTCTATTTTTTTTTAAACAAAGTGAATT  950

seq1  C  950
      |
seq2  C  951


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