BAC Information

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BAC

Clone NameB6Ng01-264C22
Chromosome10 (Build37)
Map Location 104,090,107 - 104,091,166
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264C22.bB6Ng01-264C22.g
ACCGA068153GA068154
length1,1951,055
definitionB6Ng01-264C22.b B6Ng01-264C22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taagatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttaggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagaggtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagaagaaagtagccaagggagctaagggatctgcaaccc
taataggtgaacaacattatgagctaaccagtaccccgagcttctgactc
ttagctgcatatatatcaaagatgccctagtcggcatcactggaaagaga
gccattgaactgccaaacctttaaatgctcagttacaggtaatctgccaa
atggggattgtggccaggcgagtgggcttctcactctcactgatc

gaattctttgttgggggaccaggaaggatggcaacatttcgaatgtaaat
aaataaaacaataaaaacaataatgctatggaaccaaactggaaaaagac
atatgatattggaaacaggaagtggagattttagtgtaggtgctctgtag
tgtattcatgagaagacagaagtctggagacctaagataggtggggccat
ctgaggatttatggcaaaagtaacaaatgcaagttccataaaatgagact
ataacaagtcattcctgaacacagagatatatagctgacgacaggctgtc
attaaaattttcataagtaattgtatgggctgaagagatggctcagaggt
tcagatcactgactgctctttcagaggacctgagttcaattcctaatcaa
gagacagctcacaactctctgtacctcccagatctgacacccttacacaa
acttgtatgcaggcaaaacaccaatgcagataaataatataaagtaatat
aaaataaaataataaaaataattgtcccaaatcagaaattatgagatgga
tcaagtgtacattgtggaaaaactagatagaggttcatcagtaacaaaga
aaaggattttttcaacttacattcaacctagtccatgtgagcagtctcca
ggggatcagaagagaatgttaacacattctaattctgtccagcaggttct
tgtaaaagatgattactcctgatttttttccttaaggccctcagaattgg
cattatatgccaccctagaacatgtcactatggcaaatgagttaccatga
attcacagtacttgaacaaattgcagatacaagaaaggaggcatttttaa
tctagagagaggagatgaatgctccctggtgaaagatgctctctatatag
taagagatggttatattgcccaggaaaatctgtggaaacaatcttttcaa
taatttcttacctttctcagtttcccaatacattgtctttctttctgagt
tactcttctattcagctaacatgagcattttcgtttgtgtatcgctttcg
gtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104090107_104091166
seq2: B6Ng01-264C22.g_67_1121 (reverse)

seq1  GATACCCGAAGCGATACACAAACGAAAATGCTTCCATGTTAGCTGAATAG  50
      ||||||  ||||||||||||||||||||||||  ||||||||||||||||
seq2  GATACCGAAAGCGATACACAAACGAAAATGCT--CATGTTAGCTGAATAG  48

seq1  AGAGGTAACTTCAGGAAAGAAAGACAATGTATTGGGAAACTGAAGAAAGG  100
      |   ||||| ||| |||||||||||||||||||||||||||| |||||||
seq2  AAGAGTAAC-TCA-GAAAGAAAGACAATGTATTGGGAAACTG-AGAAAGG  95

seq1  TAAGAATTATTTGAAAAGATTTGTTTCCACAGATTTTCCTGGGCAATATA  150
      |||||| |  ||||||||| ||||||||||||||||||||||||||||||
seq2  TAAGAAATTATTGAAAAGA-TTGTTTCCACAGATTTTCCTGGGCAATATA  144

seq1  ACCATCTCTTACTATATAGAGAGCATCTTTCACCAGGGAGCATTCATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCTTACTATATAGAGAGCATCTTTCACCAGGGAGCATTCATCTC  194

seq1  CTCTCTCTAGATT-AAAATGCCTCCTTTCTTGTATCTGCAATTTGTTCAA  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTAGATTAAAAATGCCTCCTTTCTTGTATCTGCAATTTGTTCAA  244

seq1  GTACTGTGAATTCATGGTAACTCATTTGCCATAGTGACATGTTCTAGGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGAATTCATGGTAACTCATTTGCCATAGTGACATGTTCTAGGGT  294

seq1  GGCATATAATGCCAATTCTGAGGGCCTTAAGGAAAAAAATCAGGAGTAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATAATGCCAATTCTGAGGGCCTTAAGGAAAAAAATCAGGAGTAAT  344

seq1  CATCTTTTACAAGAACCTGCTGGACAGAATTAGAATGTGTTAACATTCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTACAAGAACCTGCTGGACAGAATTAGAATGTGTTAACATTCTC  394

seq1  TTCTGATCCCCTGGAGACTGCTCACATGGACTAGGTTGAATGTAAGTTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCCCCTGGAGACTGCTCACATGGACTAGGTTGAATGTAAGTTGA  444

seq1  AAAAATCCTTTTCTTTGTTACTGATGAACCTCTATCTAGTTTTTCCACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCTTTTCTTTGTTACTGATGAACCTCTATCTAGTTTTTCCACAA  494

seq1  TGTACACTTGATCCATCTCATAATTTCTGATTTGGGACAATTATTTTTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACTTGATCCATCTCATAATTTCTGATTTGGGACAATTATTTTTAT  544

seq1  TATTTTATTTTATATTACTTTATATTATTTATCTGCATTGGTGTTTTGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTATATTACTTTATATTATTTATCTGCATTGGTGTTTTGCC  594

seq1  TGCATACAAGTTTGTGTAAGGGTGTCAGATCTGGGAGGTACAGAGAGTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACAAGTTTGTGTAAGGGTGTCAGATCTGGGAGGTACAGAGAGTTG  644

seq1  TGAGCTGTCTCTTGATTAGGAATTGAACTCAGGTCCTCTGAAAGAGCAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGTCTCTTGATTAGGAATTGAACTCAGGTCCTCTGAAAGAGCAGT  694

seq1  CAGTGATCTGAACCTCTGAGCCATCTCTTCAGCCCATACAATTACTTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATCTGAACCTCTGAGCCATCTCTTCAGCCCATACAATTACTTATG  744

seq1  AAAATTTTAATGACAGCCTGTCGTCAGCTATATATCTCTGTGTTCAGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAATGACAGCCTGTCGTCAGCTATATATCTCTGTGTTCAGGAA  794

seq1  TGACTTGTTATAGTCTCATTTTATGGAACTTGCATTTGTTACTTTTGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTTATAGTCTCATTTTATGGAACTTGCATTTGTTACTTTTGCCA  844

seq1  TAAATCCTCAGATGGCCCCACCTATCTTAGGTCTCCAGACTTCTGTCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTCAGATGGCCCCACCTATCTTAGGTCTCCAGACTTCTGTCTTC  894

seq1  TCATGAATACACTACAGAGCACCTACACTAAAATCTCCACTTCCTGTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAATACACTACAGAGCACCTACACTAAAATCTCCACTTCCTGTTTC  944

seq1  CAATATCATATGTCTTTTTCCAGTTTGGTTCCATAGCATTATTGTTTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCATATGTCTTTTTCCAGTTTGGTTCCATAGCATTATTGTTTTTA  994

seq1  TTGTTTTATTTATTTACATTCGAAATGTTGCCATCCTTCCTGGTCCCCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATTTATTTACATTCGAAATGTTGCCATCCTTCCTGGTCCCCCA  1044

seq1  ACAAAGAATTC  1060
      |||||||||||
seq2  ACAAAGAATTC  1055


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