BAC Information

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BAC

Clone NameB6Ng01-264J08
Chromosome10 (Build37)
Map Location 120,676,914 - 120,784,523
singlet/doubletdoublet
Overlap geneLOC100042911, 4930505D03Rik, LOC100043498
Upstream geneHmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1
Downstream geneGns, Rassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403, Srgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264J08.bB6Ng01-264J08.g
ACCGA068452GA068453
length1,1491,108
definitionB6Ng01-264J08.b B6Ng01-264J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,676,914 - 120,678,082)(120,783,411 - 120,784,523)
sequence
gaattctaggctggcctgggactcaccgtgtagaccaggttgtccctgaa
ctctcaaatgctcctgtcataatcaccttagggttgggtttacaagagca
taccaacacatccactctcatcaatagttttaaagcaaactacccagaac
cagttgtatttttagtttccaaaggccactttaggactacagaaaagttg
gtcacagaatagacaatccttacatctctctctactgacaagtgtctgct
ggagtaagacgcctgtaaggcactaagagaatcacctgggacttcttaac
tcctcagatgtcacctagagaaaaactcaagtcatagaagtcctagttgt
atttctctggcccagacctcagaaccagctgtgtcctcctaaaacgttct
tgtcacgtttaatctagcaacatggctactctggctagaatacagacaag
actttagtcccaagagacagaggcaagcagatctctgagttcaaggccag
cctgggacagagcaagtttcgggtaaagaaaagcttaggtccaggtgtgg
cggtcaacacttctaatcccagcattcaggagatgggcatgtaggtctct
gagttcttctagtcagtcaattcagttgagtccatgagttgagaggcagt
gtattggagttgagcttgaagaagttcattttgtggagctttgaggcaga
ttttacaggaacagttttacggacaggttgcagagagaacaagctagaca
caggtgaagacagaaggagccggagaatgagaaggagccagattggaaca
gattggtagagttagtacgagactaagtagaacaattcactgagaagctg
agagaagccagattgaatcagtcagcttggagaggagcttgagccagaac
agctgggttgaaccagccagtcagagttgagagttagaaatgatgagctt
attcatcagaagcctccagatgacaattacatctgccaaataaaagttgc
ttttatacactctggaacaagcctctgatgctgcgaatacatgaaatcat
cgagacaagcacttcaacacagcacactctaatgtcatcagccagtgttg
aagagatgttcatgtcttctgttctactatacgaagtatcgatacaggg

gaattccttttatgagcaaagccagagatgaatgggtggttgattagact
ggaacggcttagctgaatcgcgttcatgctacctgggatgaaaagctaga
ctgagtggatttaaattcattttctagccctacaccttttgactagcagc
acactcgggatttatatccctctcaagggatttcttctttcctgatagac
tccagtgagctgaagaccgttcttcgagagctgaagtacaggattggcat
ccagtccgcaaagttactccggcagctgaagcagaaagacaggcttctgc
ataaagttcagaagaactgtgacattgtgacagcgtgcctgcaggctgtg
tcacagaagagaagtaagtctaggggttgggagcaggtgtgtgtgtgttt
gtcatcccttgccactggctggcagtgaacctgcagcaggtactgctttg
cactgttttgaaaagtccaggaaccaaccagccagcatggcttttaaatt
taaaatgaatgcctgatgtctaagggtaagccctgactttattactcatg
agttgaggtcatgtttcactctgacaatggttatttttttgtgtgtgata
ctcaatggcttttaaacaggcatcaaatggatgtaacttaaaagtagtgt
ccttgttcctttgatctctgtgctccaatgattaaacagttggcctaacc
aacgagaacgagagccgcttacagcctgctctgaaacccaagaagggcaa
agtgtctgaacaagtgaaatccttgtcttgcgttcctcacttttagttag
agctgcttagcttggttaattgaattaaaaaaaaaaaattgttcagttac
cagtccatcttaattgtcagagactgaatcttgtgaatgaattttgtaat
tttccatacggtgcattatgtcttattctgctaacatgtccctgtttttg
tttgcatcctttttgtaacacgcagcggtgcaagtggggttcaagtatgg
caaacacaagtggtggagtgtccttcttgaaaatgccttggggcagcgtc
tgggtgcatgtcaggactgcttttctataccttccctctgtccagtttat
atgtaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_120676914_120678082
seq2: B6Ng01-264J08.b_46_1194

seq1  GAATTCTAGGCTGGCCTGGGACTCACCGTGTAGACCAGGTTGTCCCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCTGGCCTGGGACTCACCGTGTAGACCAGGTTGTCCCTGAA  50

seq1  CTCTCAAATGCTCCTGTCATAATCACCTTAGGGTTGGGTTTACAAGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAATGCTCCTGTCATAATCACCTTAGGGTTGGGTTTACAAGAGCA  100

seq1  TACCAACACATCCACTCTCATCAATAGTTTTAAAGCAAACTACCCAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACACATCCACTCTCATCAATAGTTTTAAAGCAAACTACCCAGAAC  150

seq1  CAGTTGTATTTTTAGTTTCCAAAGGCCACTTTAGGACTACAGAAAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTATTTTTAGTTTCCAAAGGCCACTTTAGGACTACAGAAAAGTTG  200

seq1  GTCACAGAATAGACAATCCTTACATCTCTCTCTACTGACAAGTGTCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGAATAGACAATCCTTACATCTCTCTCTACTGACAAGTGTCTGCT  250

seq1  GGAGTAAGACGCCTGTAAGGCACTAAGAGAATCACCTGGGACTTCTTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAAGACGCCTGTAAGGCACTAAGAGAATCACCTGGGACTTCTTAAC  300

seq1  TCCTCAGATGTCACCTAGAGAAAAACTCAAGTCATAGAAGTCCTAGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGATGTCACCTAGAGAAAAACTCAAGTCATAGAAGTCCTAGTTGT  350

seq1  ATTTCTCTGGCCCAGACCTCAGAACCAGCTGTGTCCTCCTAAAACGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGGCCCAGACCTCAGAACCAGCTGTGTCCTCCTAAAACGTTCT  400

seq1  TGTCACGTTTAATCTAGCAACATGGCTACTCTGGCTAGAATACAGACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACGTTTAATCTAGCAACATGGCTACTCTGGCTAGAATACAGACAAG  450

seq1  ACTTTAGTCCCAAGAGACAGAGGCAAGCAGATCTCTGAGTTCAAGGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGTCCCAAGAGACAGAGGCAAGCAGATCTCTGAGTTCAAGGCCAG  500

seq1  CCTGGGACAGAGCAAGTTTCGGGTAAAGAAAAGCTTAGGTCCAGGTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGACAGAGCAAGTTTCGGGTAAAGAAAAGCTTAGGTCCAGGTGTGG  550

seq1  CGGTCAACACTTCTAATCCCAGCATTCAGGAGATGGGCATGTAGGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCAACACTTCTAATCCCAGCATTCAGGAGATGGGCATGTAGGTCTCT  600

seq1  GAGTTCTTCTAGTCAGTCAATTCAGTTGAGTCCATGAGTTGAGAGGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTTCTAGTCAGTCAATTCAGTTGAGTCCATGAGTTGAGAGGCAGT  650

seq1  GTATTGGAGTTGAGCTTGAAGAAGTTCATTTTGTGGAGCTTTGAGGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGAGTTGAGCTTGAAGAAGTTCATTTTGTGGAGCTTTGAGGCAGA  700

seq1  TTTTACAGGAACAGTTTTACGGACAGGTTGCAGAGAGAACAAGCTAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGGAACAGTTTTACGGACAGGTTGCAGAGAGAACAAGCTAGACA  750

seq1  CAGGTGAAGACAGAAGGAGCCGGAGAATGAGAAGGAGCCAGATTGGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAAGACAGAAGGAGCCGGAGAATGAGAAGGAGCCAGATTGGAACA  800

seq1  GATTGGTAGAGTTAGTACGAGACTAAGTAGAACAATTCACTGAGAAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTAGAGTTAGTACGAGACTAAGTAGAACAATTCACTGAGAAGCTG  850

seq1  AGAGAAGCCAGATTGAATCAGTCAGCTTGGAGAGGAGCTTGAGCCAGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCCAGATTGAATCAGTCAGCTTGGAGAGGAGCTTGAGCCAGAAC  900

seq1  AGCTGGGTTGAACCAGCCAGTCAGAGTTGAGAGTTAGAAATGATGAGCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTTGAACCAGCCAGTCAGAGTTGAGAGTTAGAAATGATGAGCTT  950

seq1  ATTCATCAAGAAGCCTCCAAGATGACAATTACATCTGCCAAATAAAAGTT  1000
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  ATTCATC-AGAAGCCTCC-AGATGACAATTACATCTGCCAAATAAAAGTT  998

seq1  GCTTTTATACACTCTGGAAACCAAGCCTCTGATGCCTGCG-ATACATGAA  1049
      |||||||||||||||||||  ||||||||||||| ||||| |||||||||
seq2  GCTTTTATACACTCTGGAA--CAAGCCTCTGATG-CTGCGAATACATGAA  1045

seq1  TCCATCGGAGACAAAGCCACTTCCAAACCACAGCACACTCTAAATGTCAT  1099
        |||| |||||||   ||||||   | ||||||||||||| ||||||| 
seq2  ATCATC-GAGACAA--GCACTTC---AACACAGCACACTCT-AATGTCA-  1087

seq1  TCAGCCAGTGGTGAAAGAGGATGTTCATGTCCTTCTGTTTCTACTTTATT  1149
      |||||||||| || |||| ||||||||||| |||||| ||||||| ||  
seq2  TCAGCCAGTGTTG-AAGA-GATGTTCATGT-CTTCTG-TTCTACTATA--  1131

seq1  ACGGAAGTATCGATACAGGG  1169
         |||||||||||||||||
seq2  --CGAAGTATCGATACAGGG  1149


seq1: chr10_120783411_120784523
seq2: B6Ng01-264J08.g_66_1173 (reverse)

seq1  CTTTACATATAAAATGTGACAGAGGAAAGTAATAAGAAAAAGCAGCTCCT  50
      ||||||||||||| || |||||||| |||  |||   |||||||| ||||
seq2  CTTTACATATAAACTG-GACAGAGGGAAGGTATA--GAAAAGCAG-TCCT  46

seq1  GACATGCACCCAAGACGCTGCCCC-AGGCATTTTTTCAGAAGGACACTC-  98
      ||||||||||| |||||||||||| ||||| ||||  |||||||||||| 
seq2  GACATGCACCC-AGACGCTGCCCCAAGGCA-TTTTCAAGAAGGACACTCC  94

seq1  -ACAC-TGTGTTTGCCATACCTGAACCCCACTTTGCCACGCTGCGTGTTA  146
        ||| |||||||||||||| |||||||||| ||||  ||||||||||| 
seq2  ACCACTTGTGTTTGCCATACTTGAACCCCAC-TTGCACCGCTGCGTGTT-  142

seq1  ACAAAAAGGATGCAAAACAAAAACAGGGACATGTTAGCAGAATAAGACAT  196
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGGATGC-AAACAAAAACAGGGACATGTTAGCAGAATAAGACAT  191

seq1  AATGCAACCGTATGGAAAATTACAAAATTCATTCACAAGATTCAGTCTCT  246
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGC-ACCGTATGGAAAATTACAAAATTCATTCACAAGATTCAGTCTCT  240

seq1  GACAATTAAGATGGACTGGTAACTGAACAA-TTTTTTTTTTTAATTCAAT  295
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GACAATTAAGATGGACTGGTAACTGAACAATTTTTTTTTTTTAATTCAAT  290

seq1  TAACCAAGCTAAGCAGCTCTAACTAAAAGTGAGGAACGCAAGACAAGGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGCTAAGCAGCTCTAACTAAAAGTGAGGAACGCAAGACAAGGAT  340

seq1  TTCACTTGTTCAGACACTTTGCCCTTCTTGGGTTTCAGAGCAGGCTGTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGTTCAGACACTTTGCCCTTCTTGGGTTTCAGAGCAGGCTGTAA  390

seq1  GCGGCTCTCGTTCTCGTTGGTTAGGCCAACTGTTTAATCATTGGAGCACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTCTCGTTCTCGTTGGTTAGGCCAACTGTTTAATCATTGGAGCACA  440

seq1  GAGATCAAAGGAACAAGGACACTACTTTTAAGTTACATCCATTTGATGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAAAGGAACAAGGACACTACTTTTAAGTTACATCCATTTGATGCC  490

seq1  TGTTTAAAAGCCATTGAGTATCACACACAAAAAAATAACCATTGTCAGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAGCCATTGAGTATCACACACAAAAAAATAACCATTGTCAGAG  540

seq1  TGAAACATGACCTCAACTCATGAGTAATAAAGTCAGGGCTTACCCTTAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATGACCTCAACTCATGAGTAATAAAGTCAGGGCTTACCCTTAGA  590

seq1  CATCAGGCATTCATTTTAAATTTAAAAGCCATGCTGGCTGGTTGGTTCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGCATTCATTTTAAATTTAAAAGCCATGCTGGCTGGTTGGTTCCT  640

seq1  GGACTTTTCAAAACAGTGCAAAGCAGTACCTGCTGCAGGTTCACTGCCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTCAAAACAGTGCAAAGCAGTACCTGCTGCAGGTTCACTGCCAG  690

seq1  CCAGTGGCAAGGGATGACAAACACACACACACCTGCTCCCAACCCCTAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGCAAGGGATGACAAACACACACACACCTGCTCCCAACCCCTAGA  740

seq1  CTTACTTCTCTTCTGTGACACAGCCTGCAGGCACGCTGTCACAATGTCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCTCTTCTGTGACACAGCCTGCAGGCACGCTGTCACAATGTCAC  790

seq1  AGTTCTTCTGAACTTTATGCAGAAGCCTGTCTTTCTGCTTCAGCTGCCGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTCTGAACTTTATGCAGAAGCCTGTCTTTCTGCTTCAGCTGCCGG  840

seq1  AGTAACTTTGCGGACTGGATGCCAATCCTGTACTTCAGCTCTCGAAGAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTTTGCGGACTGGATGCCAATCCTGTACTTCAGCTCTCGAAGAAC  890

seq1  GGTCTTCAGCTCACTGGAGTCTATCAGGAAAGAAGAAATCCCTTGAGAGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCAGCTCACTGGAGTCTATCAGGAAAGAAGAAATCCCTTGAGAGG  940

seq1  GATATAAATCCCGAGTGTGCTGCTAGTCAAAAGGTGTAGGGCTAGAAAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAATCCCGAGTGTGCTGCTAGTCAAAAGGTGTAGGGCTAGAAAAT  990

seq1  GAATTTAAATCCACTCAGTCTAGCTTTTCATCCCAGGTAGCATGAACGCG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAAATCCACTCAGTCTAGCTTTTCATCCCAGGTAGCATGAACGCG  1040

seq1  ATTCAGCTAAGCCGTTCCAGTCTAATCAACCACCCATTCATCTCTGGCTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTAAGCCGTTCCAGTCTAATCAACCACCCATTCATCTCTGGCTT  1090

seq1  TGCTCATAAAAGGAATTC  1113
      ||||||||||||||||||
seq2  TGCTCATAAAAGGAATTC  1108


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