BAC Information

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BAC

Clone NameB6Ng01-264J21
Chromosome10 (Build37)
Map Location 102,870,361 - 103,029,904
singlet/doubletdoublet
Overlap geneSlc6a15, EG667697
Upstream geneLOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik
Downstream geneLOC667701, EG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264J21.bB6Ng01-264J21.g
ACCGA068472GA068473
length1,0411,114
definitionB6Ng01-264J21.b B6Ng01-264J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,028,860 - 103,029,904)(102,870,361 - 102,871,479)
sequence
gaattcactctcgcgcctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacacatggct
ctcctcagagattactggcggcaagcacgcgattgcttgcagcatgtacc
ggctctccacacttcattgcttgaaattctgattttttttttttacaatt
gaaagagaaggtctgtaaagaacaaatgacactagattaataaaatcatt
gaggattctttctcttttaaagttaattgagctagtaagaacaagctaat
ttactataattacaagcacaatgatttttgctaagcaaagacactggttt
ttaagaaggtatagacctaggtgtgttattgtattcctgtaaccataagc
aactagaggctaaggcaggagaccatgagtttgaagccagtgtagtcaac
agagcaagattaactcaaaactacattcaaggtaatacaatcaatgaaaa
cagtcaaataaaaaaaggcatggttggctttatttattgacatagattga
tcaaggtagccattggtctgactcccaaatcaaaaacattcagtactatc
ttgtaatacccaaatatgagattcaggatctgtagaaaagaaagtcatgc
cttcaatgtcatggtaccatttcaggaaacagtttttttttttttttttt
tttgtcatgttatattccattcttgttccaatgaaggaccatttctcata
aatacattaccagcctctgcataatagtagaacaaatcagctagacacaa
acatatgtggatggatgtacaagatggacgtattttgcaatatgcagtct
tttacttgaatattattacttgtttggataaatattttgtacctaattat
ttttctgaatgtatcaatacatgttttaatatcctttccttcagtaaggt
atagttagaccattagagatgtcgggcagtggtggccacaacgcccttaa
tcccagattgaagcagttgatttctgagttgaaggctagct

gaattccttttattctttgcatttcttcacattatctgttttctttattc
taattaactaagctactccataggccagaaatatttgtatacatatatac
atacatacatgcatacatatatatatatatacatacatatattttgtttg
tttttattacagcaaatcaatatttatatgcataagtcctaacaaaatta
aaaataccacatacttaataatgcactatgttattccaagacaattgaaa
taatgagcaatgttatatagttgtacattttgtccagcaatgctgaactg
tattttactctttgggtccaggcaatgagcacataacttaaggaataaag
cgtatcttggcgtatttctttgcagcagctctcaccattacatagcgttt
tcccaccttcactgctgagaagaatcacctcctgatgttgctcttggtta
gtgctgctctcttctgtgttccgcaggctgtgcagggcactggcttggct
ttcattgcctttacagaggccatgacacatttccctgcatctcctttctg
gtcagtgatgtttttcctcatgttgataaatctcggcctcggcagcatgt
ttggaacaattgaagggatcatcactcctattgtggataccttcaaagtg
aggaaggaaatactcactggtgagatattactcttgacttcaatgtagcc
catttataagtgtgagatattagagactgcaattggactgtgttatatct
tggatgttattaatatctatatgacaatagattataatttataataatac
aatagtaggtataattatttcagtgtattagtttttttaaggacaaaata
tacacttaatataaagttacatttatacttctatcttcttcaaaatgatg
tttgtatttctgtcctatattgattacttatcggattgttctgataaaca
ccatgtccaaaggcaacttatagaagaaaaaaattgatttgggtttgaca
ctttgagtgggttagagacactgagggaacagtaagttgacagcagctga
gtactcacgttcgatccataaagagagtagagacttgctttagttaactc
atgtatgcctagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103028860_103029904
seq2: B6Ng01-264J21.b_49_1089 (reverse)

seq1  AGCTGGCCTTCAACTCAGAAATCCACCTGCCTTCCAAATTCTGGGATTAA  50
      |||| ||||||||||||||||| || ||| ||||   | |||||||||||
seq2  AGCTAGCCTTCAACTCAGAAAT-CAACTG-CTTC---AATCTGGGATTAA  45

seq1  AGGCG-TGT-GCCACCACTGCCCGACATCTTCTAATGTTCTAACTATACC  98
       |||| ||| ||||||||||||||||||| ||||||| ||||||||||||
seq2  GGGCGTTGTGGCCACCACTGCCCGACATC-TCTAATGGTCTAACTATACC  94

seq1  TTACTGAAGGAAAGGATATTAAAACATGTTATTTGATACATTCAG-AAAA  147
      |||||||||||||||||||||||||||||   ||||||||||||| ||||
seq2  TTACTGAAGGAAAGGATATTAAAACATGT--ATTGATACATTCAGAAAAA  142

seq1  TAATTAGGTACAAAATATTTATCC-AACAAGTAATAATATTCAAGTAAAA  196
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAATTAGGTACAAAATATTTATCCAAACAAGTAATAATATTCAAGTAAAA  192

seq1  GACTGCATATTGCAAAATACGTCCATCTTGTACATCCATCCACATATGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCATATTGCAAAATACGTCCATCTTGTACATCCATCCACATATGTT  242

seq1  TGTGTCTAGCTGATTTGTTCTACTATTATGCAGAGGCTGGTAATGTATTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTAGCTGATTTGTTCTACTATTATGCAGAGGCTGGTAATGTATTT  292

seq1  ATGAGAAATGGTCCTTCATTGGAACAAGAATGGAATATAACATGACAAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAATGGTCCTTCATTGGAACAAGAATGGAATATAACATGACAAAA  342

seq1  AAAAAAAAAAAAAAAAACTGTTTCCTGAAATGGTACCATGACATTGAAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAACTGTTTCCTGAAATGGTACCATGACATTGAAGG  392

seq1  CATGACTTTCTTTTCTACAGATCCTGAATCTCATATTTGGGTATTACAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTTCTTTTCTACAGATCCTGAATCTCATATTTGGGTATTACAAG  442

seq1  ATAGTACTGAATGTTTTTGATTTGGGAGTCAGACCAATGGCTACCTTGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTACTGAATGTTTTTGATTTGGGAGTCAGACCAATGGCTACCTTGAT  492

seq1  CAATCTATGTCAATAAATAAAGCCAACCATGCCTTTTTTTATTTGACTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATGTCAATAAATAAAGCCAACCATGCCTTTTTTTATTTGACTGT  542

seq1  TTTCATTGATTGTATTACCTTGAATGTAGTTTTGAGTTAATCTTGCTCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGATTGTATTACCTTGAATGTAGTTTTGAGTTAATCTTGCTCTG  592

seq1  TTGACTACACTGGCTTCAAACTCATGGTCTCCTGCCTTAGCCTCTAGTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTACACTGGCTTCAAACTCATGGTCTCCTGCCTTAGCCTCTAGTTG  642

seq1  CTTATGGTTACAGGAATACAATAACACACCTAGGTCTATACCTTCTTAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGTTACAGGAATACAATAACACACCTAGGTCTATACCTTCTTAAA  692

seq1  AACCAGTGTCTTTGCTTAGCAAAAATCATTGTGCTTGTAATTATAGTAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTGTCTTTGCTTAGCAAAAATCATTGTGCTTGTAATTATAGTAAA  742

seq1  TTAGCTTGTTCTTACTAGCTCAATTAACTTTAAAAGAGAAAGAATCCTCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTGTTCTTACTAGCTCAATTAACTTTAAAAGAGAAAGAATCCTCA  792

seq1  ATGATTTTATTAATCTAGTGTCATTTGTTCTTTACAGACCTTCTCTTTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTATTAATCTAGTGTCATTTGTTCTTTACAGACCTTCTCTTTCA  842

seq1  ATTGTAAAAAAAAAAAATCAGAATTTCAAGCAATGAAGTGTGGAGAGCCG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAAAAAAAAAATCAGAATTTCAAGCAATGAAGTGTGGAGAGCCG  892

seq1  GTACATGCTGCAAGCAATCGCGTGCTTGCCGCCAGTAATCTCTGAGGAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGCTGCAAGCAATCGCGTGCTTGCCGCCAGTAATCTCTGAGGAGA  942

seq1  GCCATGTGTGCCGCGAGCAATCGCCATTATAAGATGGCGCGGGCCTCCGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGTGCCGCGAGCAATCGCCATTATAAGATGGCGCGGGCCTCCGC  992

seq1  TGTGCCTAACTAGTAAACAAGCCTTGTACGCAGGCGCGAGAGTGAATTC  1045
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTAACTAGTAAACAAGCCTTGTACGCAGGCGCGAGAGTGAATTC  1041


seq1: chr10_102870361_102871479
seq2: B6Ng01-264J21.g_69_1182

seq1  GAATTCCTTTTATTCTTTGCATTTCTTCACATTATCTGTTTTCTTTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTATTCTTTGCATTTCTTCACATTATCTGTTTTCTTTATTC  50

seq1  TAATTAACTAAGCTACTCCATAGGCCAGAAATATTTGTATACATATATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACTAAGCTACTCCATAGGCCAGAAATATTTGTATACATATATAC  100

seq1  ATACATACATGCATACATATATATATATATACATACATATATTTTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATGCATACATATATATATATATACATACATATATTTTGTTTG  150

seq1  TTTTTATTACAGCAAATCAATATTTATATGCATAAGTCCTAACAAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTACAGCAAATCAATATTTATATGCATAAGTCCTAACAAAATTA  200

seq1  AAAATACCACATACTTAATAATGCACTATGTTATTCCAAGACAATTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCACATACTTAATAATGCACTATGTTATTCCAAGACAATTGAAA  250

seq1  TAATGAGCAATGTTATATAGTTGTACATTTTGTCCAGCAATGCTGAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGCAATGTTATATAGTTGTACATTTTGTCCAGCAATGCTGAACTG  300

seq1  TATTTTACTCTTTGGGTCCAGGCAATGAGCACATAACTTAAGGAATAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACTCTTTGGGTCCAGGCAATGAGCACATAACTTAAGGAATAAAG  350

seq1  CGTATCTTGGCGTATTTCTTTGCAGCAGCTCTCACCATTACATAGCGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTTGGCGTATTTCTTTGCAGCAGCTCTCACCATTACATAGCGTTT  400

seq1  TCCCACCTTCACTGCTGAGAAGAATCACCTCCTGATGTTGCTCTTGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCTTCACTGCTGAGAAGAATCACCTCCTGATGTTGCTCTTGGTTA  450

seq1  GTGCTGCTCTCTTCTGTGTTCCGCAGGCTGTGCAGGGCACTGGCTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCTCTCTTCTGTGTTCCGCAGGCTGTGCAGGGCACTGGCTTGGCT  500

seq1  TTCATTGCCTTTACAGAGGCCATGACACATTTCCCTGCATCTCCTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGCCTTTACAGAGGCCATGACACATTTCCCTGCATCTCCTTTCTG  550

seq1  GTCAGTGATGTTTTTCCTCATGTTGATAAATCTCGGCCTCGGCAGCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGATGTTTTTCCTCATGTTGATAAATCTCGGCCTCGGCAGCATGT  600

seq1  TTGGAACAATTGAAGGGATCATCACTCCTATTGTGGATACCTTCAAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACAATTGAAGGGATCATCACTCCTATTGTGGATACCTTCAAAGTG  650

seq1  AGGAAGGAAATACTCACTGGTGAGATATTACTCTTGACTTCAATGTAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAATACTCACTGGTGAGATATTACTCTTGACTTCAATGTAGCC  700

seq1  CATTTATAAGTGTGAGATATTAGAGACTGCAATTGGACTGTGTTATATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATAAGTGTGAGATATTAGAGACTGCAATTGGACTGTGTTATATCT  750

seq1  TGGATGTTATTAATATCTATATGACAATAGATTATAATTTATAATAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTTATTAATATCTATATGACAATAGATTATAATTTATAATAATAC  800

seq1  AATAGTAGGTATAATTATTTCAGTGTATTAGTTTTTTTAAGGACAAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAGGTATAATTATTTCAGTGTATTAGTTTTTTTAAGGACAAAATA  850

seq1  TACACTTAATATAAAGTTACATTTATACTTCTATCTTCTTCAAAATGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTAATATAAAGTTACATTTATACTTCTATCTTCTTCAAAATGATG  900

seq1  TTTGTATTTCTGTCCTATATTGATTACTTATC-GATTGTTCTGATAAAAC  949
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  TTTGTATTTCTGTCCTATATTGATTACTTATCGGATTGTTCTGAT-AAAC  949

seq1  ACCATGTCC-AAGGCAACTTATAGAAGAAAAAAATTGATTTGGGTTTGAC  998
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTCCAAAGGCAACTTATAGAAGAAAAAAATTGATTTGGGTTTGAC  999

seq1  ACTTTGAGTGGGTTAGAGACACTGAGGGAACAAGTAGGTGGACCAGCAGC  1048
      ||||||||||||||||||||||||||||||| |||| || || |||||||
seq2  ACTTTGAGTGGGTTAGAGACACTGAGGGAAC-AGTAAGTTGA-CAGCAGC  1047

seq1  TGAGAACTCACGTCCGGATCCATAAAGAGGAAGTAGAGACCTTGCTTTAA  1098
      |||| |||||||| | |||||||||||||  |||||||| |||||||| |
seq2  TGAGTACTCACGTTC-GATCCATAAAGAG--AGTAGAGA-CTTGCTTT-A  1092

seq1  TTTTACTCATGTATG-CTAGAC  1119
       || ||||||||||| ||||||
seq2  GTTAACTCATGTATGCCTAGAC  1114


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