BAC Information

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BAC

Clone NameB6Ng01-266O04
Chromosome10 (Build37)
Map Location 78,815,246 - 78,815,802
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041500, Rrp1, Cstb, Pdxk, EG665862, Olfr1358, LOC546482, Ilvbl, Syde1, Olfr1357, LOC665890, Casp14, Ccdc105, Slc1a6, Olfr1356, GA_x5J8B7W4DUT-12263-11330, GA_x5J8B7TPDN2-1058-1265, Olfr233-ps1, Olfr8, GA_x5J8B7TNKDU-1250-1574, Olfr1353, Olfr1352, Olfr1351, Olfr57, 2610008E11Rik, EG624765, AJ543404, LOC100041709
Downstream geneEG624845, EG625029, Ppap2c, Mier2, Theg, 4932409I22Rik, Shc2, Gm1157, Madcam1, Gtrgeo22, Cdc34, Gzmm, Bsg, Hcn2, Polrmt, Fgf22, Rnf126, Fstl3, Prssl1, Palm, 9130017N09Rik, Ptbp1, BC005764, Prtn3, Ela2, Cfd, Thrap5, C030046I01Rik, Kiss1r, Arid3a, Wdr18, Grin3b, ORF61, Cnn2, Abca7, Hmha1, Polr2e, Gpx4, Sbno2, Stk11, Dos, Atp5d, Midn, Cirbp, 1600002K03Rik, Efna2, Mum1, Ndufs7, Gamt, Dazap1, Rps15, Apc2, 2310011J03Rik, Pcsk4, Reep6, Adamtsl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266O04.bB6Ng01-266O04.g
ACCGA070165GA070166
length1,174999
definitionB6Ng01-266O04.b B6Ng01-266O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattctatggatctacctgtctgtcgctgtaccagtattatgct
gtttttatcacaattgctctgaagtacagcttgaggtgaggcatggtgat
tccaccaaaggttctattattgttgagaagagtttttcctattctaggtt
tttttattgttgttgttatttcagatgaatttgtaaattgccctttctaa
ctcagtgaagaattgagttggaattttgatggggattgccttgagtctat
tgattgcttttgacaagataccatttttactgtattgatcctggcaattc
atgagcatagtagatctttccatcttctaagatcttcgatttctttcttc
agagacttgaagttcttatcatacagatctttcacttccttagttagagt
cacaccaaggtattttatattatttgtgactattgtgaagggtgttcttt
ccctgatttctttctcatcctctttatcctttgtgtagagaaaggccact
gaggtaacccaatcacaaaagaacacacgtgctatacactcattaataag
cagatattagaccagaaatttacaatacacaagatacaatttgcaaaaca
catgaaactcaagaagaaggaagaccaaagtgtggatacttcattccttt
ttagaatggggaacaaaatacctatggaaggagttacagagacaaagatg
ggagctcagacggaaggaaggaccatccagagaatgccccacctgggaat
ccatcatataatcaaccagcaaacccagacactatttgaatattccaaaa
agattttgctgacaggaccctaatatagctctctttttctgaggctatgc
cagtgcctgacaaatacagaagtgtatgctcacagtcatctattagatgg
aacacagggctcctaatgaaggaactagagaaagttacccaaggagctga
aggggttctgctacccaataagaggacaataatatgactatcagtaccct
gagagttgtgtctctagtgatattgtagcagagatggcctagttggaaat
caatgggaaggaggaggcctgggttttggtgaagatacatgtaccccaag
tacaacgggtatgccaggtacagaaagtgggagttcagttggattggaca
actcatggcacacggtgtaggaat
gaattccccttaaagagatagcccctctggctatctatcccttgcttcag
ggaagatgagtggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgttgtgtgtttggcacatgtgttaggtgcagagtatgcgggtccgca
ctttcgccacggtagtgtaggcttttgctgcagtggaggtgggacaatct
cctcagattcggtttgccgctctaaaagaaattatgctgcgttatgccgt
ggggtgcgaggctaagcactgcacagaggatagcttgctgttggcatcct
gtggaaggcatgtctgattgcatgaaggttcagtgtcctagttcccttcc
cccaggaaaaatgacacgggagctggccaagacctctctgggtgatgagc
ccaagggatggttttgtgtagggcctctatgcttgcacactggggatcag
acctctgccttcacccatgaggcttgcttgcagcaattaagatctggcca
tagattaatcaacatcctggccttttgatgcacctgccgcaagcaaaaca
caatctccccaggtgtggcttggcatgatagagaggtagtcagtaataag
actccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgtt
tgtctcccaaggatgggtaaggggcatggctgcgggggggggggggggcg
ttatctacagacattctctctgccaaaaaagaaaaaaggggggagatgtg
aggagcgggtgtgagaaagatccctgttgcagcatcgttcttcctggcca
gttgggcgcgagcaacaattaatacataaaataattcatggaccataaca
ccatgttgattcccttcttttaacaaggatagatacagagaagcaagtac
tgcttgtaaagaagcttattcaagatttggtttgggaagagcactgttta
ttatctaacatctggtggtcagaatcagcatatactccaccaaccttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_78815246_78815802
seq2: B6Ng01-266O04.g_507_1063 (reverse)

seq1  ATAAGGTTGCTGGTGTATATATGCTTGATTTCTGACCACCAGATGTTAGA  50
      ||||||||| ||| |  ||||||| ||| |||||||||||||||||||||
seq2  ATAAGGTTGGTGGAG--TATATGC-TGA-TTCTGACCACCAGATGTTAGA  46

seq1  TAATAAACAGTTGCTTCTTCCC-AACCAAATCCTG-ATTAGCTTCTTTAC  98
      |||||||||| ||| ||||||| ||||||||| || || |||||||||||
seq2  TAATAAACAG-TGC-TCTTCCCAAACCAAATCTTGAATAAGCTTCTTTAC  94

seq1  -AGCAGTACTTGCTTCTCTGTATCTATCCTTG-TAGAAGAAGGAATTCAA  146
       ||||||||||||||||||||||||||||||| || ||||||| | ||||
seq2  AAGCAGTACTTGCTTCTCTGTATCTATCCTTGTTAAAAGAAGGGAATCAA  144

seq1  CATGGTGTTTATTGTTCATGAATTATTTTATGTATTTATTGTTGCTCGCG  196
      ||||||| |||| || |||||||||||||||||||| |||||||||||||
seq2  CATGGTG-TTATGGTCCATGAATTATTTTATGTATTAATTGTTGCTCGCG  193

seq1  CCCAACTGGCCAGGAAGAACGATGCTGCAACA-GGATCCTTCTCACACCC  245
      |||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  CCCAACTGGCCAGGAAGAACGATGCTGCAACAGGGATCTTTCTCACACCC  243

seq1  GCTCCTCACATCTCCCCCCTTTTTTCTTTTTTGGCAGAGAGAATGTCTGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCACATCTCCCCCCTTTTTTCTTTTTTGGCAGAGAGAATGTCTGT  293

seq1  AGATAACG--CCCCCCCCCCCCCGCAGCCATGCCCCTTACCCATCCTTGG  343
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACGCCCCCCCCCCCCCCCGCAGCCATGCCCCTTACCCATCCTTGG  343

seq1  GAGACAAACAGCATTGGTTTGATCCCTGTCTTAGGTTGGTGACATGCCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAACAGCATTGGTTTGATCCCTGTCTTAGGTTGGTGACATGCCCA  393

seq1  GGGAGTCTTATTACTGACTACCTCTCTATCATGCCAAGCCACACCTGGGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCTTATTACTGACTACCTCTCTATCATGCCAAGCCACACCTGGGG  443

seq1  AGATTGTGTTTTGCTTGCGGCAGGTGCATCAAAAGGCCAGGATGTTGATT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTGTTTTGCTTGCGGCAGGTGCATCAAAAGGCCAGGATGTTGATT  493

seq1  AATCTATGGCCAGATCTTAATTGCTGCAAGCAAGCCTCATGGGTGAAGGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATGGCCAGATCTTAATTGCTGCAAGCAAGCCTCATGGGTGAAGGC  543

seq1  AGAGGTCTGATCCC  557
      ||||||||||||||
seq2  AGAGGTCTGATCCC  557