BAC Information

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BAC

Clone NameB6Ng01-267I10
Chromosome10 (Build37)
Map Location 81,604,992 - 81,606,195
singlet/doubletsinglet
Overlap geneAU041133
Upstream geneZbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063
Downstream geneLOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267I10.bB6Ng01-267I10.g
ACCGA070623GA070624
length1,1951,191
definitionB6Ng01-267I10.b B6Ng01-267I10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacagacaacttcctatgcttggtgcatttggattggagggac
aagagattaacatactagttccacaaattagccatcttgtgaattctgga
ttactaactaacacaggtatgatgggtacagtgcgtacaaatgataccgt
aattaagatggtgctcactgcacaggtgagaatcctgagacgcctgttat
tatctcccaaggagaagtcaccggagcccttatgcttgagggtcttcaaa
tccttgacgatagtctcactcagaattgatgtgacaatgaataaaactgt
ggaagttgtctctgcttctagagactttagtgagtggcatggagttggaa
tgtcaggccctgtatcaccatttgataattctagtcagactaatctgtgg
aaattggcaagcacttttcatccacttgaagcgagaacataaagttacac
tttaataaaaaaaaaaatttcatttgtcctttaacttaaaatcatacctt
ttacggcttttgtgccatcaccttacttgttcctgaatggacctgtgcaa
tgacgccatagtgattattgcgtcatttatacatgcgatgctcttcatac
ctgtgccaatgccagtgcctctttgaatgtttcctttgaagtttatatat
tctcagagcaagtccagcagtctggatgccagtgaggttgtcaagaccat
agcaagactcacctgtgatgatactattacagaaacttgctgcaagaata
tcaagaataactcgattgatagtgggatcgatcacttatgtggccctggg
aatcatcgcgttaactgctacagctactacagctagagttccacttcatg
aagaaggtcaaactgctgaacttgttaaatgcccggcataggcagtctca
tgaactttgattcaacaaaataagataaatagagaaatgcttgatgaaat
aggtgagctgagacagctgtaaaactcattggagagcaattagaattatt
caagaacaaatgaaattgaaatatgactggaatatttgttttcttatagt
attacactttaggactcagtgatacaatatgatgggaaaacgtaaagtgg
catttgtagatcatcttagttcttctcaatgtttttagattggcagcaaa
tgtagaaatgtcttcaagagctgccttaaaataacagggaatgga
gaattcagtgggtctgtcttacacgcgttcacgaccagccaggaagaacg
cagcaaaccggaatcttctgcggcaaagctttattgcttacatcttcagg
agccagagcgcaagagagcaagagctctattgcttacatctttaggagcc
agagcgcaagagagcaagagtgcaagagcaaaagcaagagagcaagagag
caagagccagagcaagagagagaatggcgaaaccccgtcccttttaagga
gaattgtcctccgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgtcgtcacggggaaggcagagcacatggagtggagaacta
cccttggcacatgcgcagattatttgtttaccacttagaacacaggatgt
cagcgcaatcttgcaacggcgaatgtgagggtggcttcctacaggtctga
aaatgagtggtgtgatcccccttttctgtttacttgtaaaatgacttgct
gactgcatttgaaattctgtgataaggaataaatgcgtagagcacccaga
attatgtaaatatattctcagtgaatgtatatttacaatgcagtctcacc
atgtctattatgtacatgtgtgggctattttaggatgcagtgacctatga
ggatgtgcatgtgaacttctctcatgaagagtgggctttgctggattctt
cccagaagagtctctacagagatgtgatgctggaaacctactggaacctc
actgctatcggtaagaatattagttttctttcactttctaaacaagggaa
caagcgtttcttggttattggtgcactgtgatttctattgtgacagagga
agaatgtggtgaataatcagacatgcttctcaacttcaccaaagattctg
acttaaaatttgcatactatctaataatatatcataaattttctggtcct
gtattttaggttacaaattggaagaccacatgttgaagaatactatcaaa
gtatagagacatagaaggtaaatttcatgtgcaagctgatataatgtatc
actgaagaaaaattatttactttagtttaaagaaaagcaacagtgtaatt
agtacagcaatatatataattgatgataatcattcccataagacggttac
ctgggagattttaaaggtaagccttgagacatcgtgggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81604992_81606195
seq2: B6Ng01-267I10.b_46_1240 (reverse)

seq1  TCCA-TCCCTGTTATTTT-AGGCAGCTTCTTTGAAGACATTTCTACAATT  48
      |||| ||||||||||||| ||||||||   |||||||||||||||||   
seq2  TCCATTCCCTGTTATTTTAAGGCAGCT--CTTGAAGACATTTCTACA---  45

seq1  TTTTGCTGCAAATCCTAAAACATTTGAGAAGAATTAAGATGATCCTACAA  98
       |||||||| ||||  |||||| |||||||||| ||||||||| ||||||
seq2  -TTTGCTGCCAATCTAAAAACA-TTGAGAAGAACTAAGATGAT-CTACAA  92

seq1  ATG-CACTTTAACGTTTTCCCAATCATATTTGTTATCACTGAGTCCTAAA  147
      ||| |||||| |||||||||| ||||||||   |||||||||||||||||
seq2  ATGCCACTTT-ACGTTTTCCC-ATCATATT--GTATCACTGAGTCCTAAA  138

seq1  GGTGTAATACTATAAGAAA--CAATATTCCAGTCATATTTCAATTTCATT  195
       ||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  -GTGTAATACTATAAGAAAACAAATATTCCAGTCATATTTCAATTTCATT  187

seq1  TGTTCTTTGAATAATTCTAATTGCTCTCCAATGAGTTTTACAGCTTGTCT  245
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTTC-TTGAATAATTCTAATTGCTCTCCAATGAGTTTTACAGC-TGTCT  235

seq1  CAGCTCACCTATTTCATCAAGCATTTCTCTATTTATCTTATTTTGTTGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACCTATTTCATCAAGCATTTCTCTATTTATCTTATTTTGTTGAA  285

seq1  TCAAAGTTCATGAGACTGCCTATGCC-GGCATTTAACAAGTTCAGCAGTT  344
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAAAGTTCATGAGACTGCCTATGCCGGGCATTTAACAAGTTCAGCAGTT  335

seq1  TGACCTTCTTCATGAAGTGGAACTCTAGCTGTAGTAGCTGTAGCAGTTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTCTTCATGAAGTGGAACTCTAGCTGTAGTAGCTGTAGCAGTTAA  385

seq1  CGCGATGATTCCCAGGGCCACATAAGTGATCGATCCCACTATCAATCGAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGATGATTCCCAGGGCCACATAAGTGATCGATCCCACTATCAATCGAG  435

seq1  TTATTCTTGATATTCTTGCAGCAAGTTTCTGTAATAGTATCATCACAGGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTGATATTCTTGCAGCAAGTTTCTGTAATAGTATCATCACAGGT  485

seq1  GAGTCTTGCTATGGTCTTGACAACCTCACTGGCATCCAGACTGCTGGACT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTGCTATGGTCTTGACAACCTCACTGGCATCCAGACTGCTGGACT  535

seq1  TGCTCTGAGAATATATAAACTTCAAAGGAAACATTCAAAGAGGCACTGGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAGAATATATAAACTTCAAAGGAAACATTCAAAGAGGCACTGGC  585

seq1  ATTGGCACAGGTATGAAGAGCATCGCATGTATAAATGACGCAATAATCAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCACAGGTATGAAGAGCATCGCATGTATAAATGACGCAATAATCAC  635

seq1  TATGGCGTCATTGCACAGGTCCATTCAGGAACAAGTAAGGTGATGGCACA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCGTCATTGCACAGGTCCATTCAGGAACAAGTAAGGTGATGGCACA  685

seq1  AAAGCCGTAAAAGGTATGATTTTAAGTTAAAGGACAAATGAAATTTTTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCGTAAAAGGTATGATTTTAAGTTAAAGGACAAATGAAATTTTTTT  735

seq1  TTTTATTAAAGTGTAACTTTATGTTCTCGCTTCAAGTGGATGAAAAGTGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAAAGTGTAACTTTATGTTCTCGCTTCAAGTGGATGAAAAGTGC  785

seq1  TTGCCAATTTCCACAGATTAGTCTGACTAGAATTATCAAATGGTGATACA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAATTTCCACAGATTAGTCTGACTAGAATTATCAAATGGTGATACA  835

seq1  GGGCCTGACATTCCAACTCCATGCCACTCACTAAAGTCTCTAGAAGCAGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGACATTCCAACTCCATGCCACTCACTAAAGTCTCTAGAAGCAGA  885

seq1  GACAACTTCCACAGTTTTATTCATTGTCACATCAATTCTGAGTGAGACTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTCCACAGTTTTATTCATTGTCACATCAATTCTGAGTGAGACTA  935

seq1  TCGTCAAGGATTTGAAGACCCTCAAGCATAAGGGCTCCGGTGACTTCTCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAAGGATTTGAAGACCCTCAAGCATAAGGGCTCCGGTGACTTCTCC  985

seq1  TTGGGAGATAATAACAGGCGTCTCAGGATTCTCACCTGTGCAGTGAGCAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGATAATAACAGGCGTCTCAGGATTCTCACCTGTGCAGTGAGCAC  1035

seq1  CATCTTAATTACGGTATCATTTGTACGCACTGTACCCATCATACCTGTGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAATTACGGTATCATTTGTACGCACTGTACCCATCATACCTGTGT  1085

seq1  TAGTTAGTAATCCAGAATTCACAAGATGGCTAATTTGTGGAACTAGTATG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTAATCCAGAATTCACAAGATGGCTAATTTGTGGAACTAGTATG  1135

seq1  TTAATCTCTTGTCCCTCCAATCCAAATGCACCAAGCATAGGAAGTTGTCT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCTTGTCCCTCCAATCCAAATGCACCAAGCATAGGAAGTTGTCT  1185

seq1  GTAAGAATTC  1204
      ||||||||||
seq2  GTAAGAATTC  1195