BAC Information

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BAC

Clone NameB6Ng01-268A21
Chromosome10 (Build37)
Map Location 18,142,419 - 18,143,302
singlet/doubletsinglet
Overlap geneNhsl1
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646
Downstream geneHebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268A21.bB6Ng01-268A21.g
ACCGA071019GA071020
length987885
definitionB6Ng01-268A21.b B6Ng01-268A21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaaaaacaggaacaccaatcaagttccaatcagaccaccatg
gattaaagctggaattcaacaaaaacaggaacaccagtcaagttccaatc
agcagctcacagattgggaaaggatcttcaccaaccctacatttcacaga
gggctcatatccagaatttacaaagaactcaagaagttagacactaacaa
cccaaataacccaattttaaaatggggtacagaactaaacagagaattct
taacagaggaatctcgaatggctgagaaacacttaaggaaatgttcaaag
tccttagttttcagggaaatataaatcaaaacaacttggaggttccatct
tacaccagtcagaatggctaagttcaaaaactcaagtgatagcacatgct
agcgaggatgtggaacaaggggaacactccttcattgatggtgggtttgc
aaacttgtacaaccactctggaaatcaatttggtggtttctcagaaaact
gggaatagttctatctcaagacccagctatgctactcctgggcatatacc
caaaagatgttccaacatcccacaaagacacttgcttaactgtgttcata
gcagccttattcataatagccagaaactggaaacaacctagatgtccctc
aactgaagaatgaataaataaaatgtggtacatatacacaatggaatact
attcagctactaaaaatcaagacatcgtgaattttgcaggcaaatagaac
ttgaaaatatcatgctgagtgaggtaactcagttcccaaatgacatgcat
gatatgtactcacttataagtggatattagcgatagaatataggcactat
gttatatgccacagacccgaagaagctaaacaaaaaggaagcacaatcga
agaagcttgactctcacttagaaggggaataaaataatcataggaagcag
tggggggagggacttgggagcaggggatggggaaggg
gaattctttctaatatgagcaatcacttgagtagtttctgaagtgaaatg
actgcagtaatagccatgttctttgtcctttcttggctccatttgaatgc
tttagtagagagttgtgtgtaataactaagtctgggatgtggcgggcttc
tatcagagataccttcctagtgtgctgagagctgacaggatgagggagga
gcagacaggtgagtctgactagtgggggcgggtgggggtgtccctcgcct
tttgttctttctccctttttgaatgctgtttgagatgagaatatgttctt
ttctatctgtggtttctttagttttgatgttcctgactgctgtggaggtc
acacgagggattcctctgctgacctccccagggcaggccttggaagtttg
gtctttgctctgggtcatccagaggaaggttttctaagcagatgtgccag
ggacacatcttgcttagcattgcaaagacagagggagagaagcctcaacc
ttgagggtctcaagtgtcaattttatttcactcaaagacaaaaaccacat
tcattctgttgcaaaaaaggaaagggtgggggagcgagcccacgcccccc
tagctgcagcctttgtctacaccagcttcctggagacactttagaagatc
ggccaatagttgcactgtggcatgctgtgtggcattctgtgtttgacaga
tactgttttttccacttgactggttgtagatttttttaatagttgaattt
gtaaatacatggaaaaaaaaaataaaagaaaggtaaatctctgcctttta
cccataacagatttgtaagtcacttggatgggaatttaactttattgatg
ttcagccagagagggagggaaggaggaaagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18142419_18143302
seq2: B6Ng01-268A21.g_62_946

seq1  GAATTCTTTCTAATATGAGCAATCACTTGAGTAGTTTCTGAAGTGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAATATGAGCAATCACTTGAGTAGTTTCTGAAGTGAAATG  50

seq1  ACTGCAGTAATAGCCATGTTCTTTGTCCTTTCTTGGCTCCATTTGAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTAATAGCCATGTTCTTTGTCCTTTCTTGGCTCCATTTGAATGC  100

seq1  TTTAGTAGAGAGTTGTGTGTAATAACTAAGTCTGGGATGTGGCGGGCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGAGAGTTGTGTGTAATAACTAAGTCTGGGATGTGGCGGGCTTC  150

seq1  TATCAGAGATACCTTCCTAGTGTGCTGAGAGCTGACAGGATGAGGGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGATACCTTCCTAGTGTGCTGAGAGCTGACAGGATGAGGGAGGA  200

seq1  GCAGACAGGTGAGTCTGACTAGTGGGGGCGGGTGGGGGTGTCCCTCGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAGGTGAGTCTGACTAGTGGGGGCGGGTGGGGGTGTCCCTCGCCT  250

seq1  TTTGTTCTTTCTCCCTTTTTGAATGCTGTTTGAGATGAGAATATGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTCTCCCTTTTTGAATGCTGTTTGAGATGAGAATATGTTCTT  300

seq1  TTCTATCTGTGGTTTCTTTAGTTTTGATGTTCCTGACTGCTGTGGAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTGTGGTTTCTTTAGTTTTGATGTTCCTGACTGCTGTGGAGGTC  350

seq1  ACACGAGGGATTCCTCTGCTGACCTCCCCAGGGCAGGCCTTGGAAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGGGATTCCTCTGCTGACCTCCCCAGGGCAGGCCTTGGAAGTTTG  400

seq1  GTCTTTGCTCTGGGTCATCCAGAGGAAGGTTTTCTAAGCAGATGTGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGCTCTGGGTCATCCAGAGGAAGGTTTTCTAAGCAGATGTGCCAG  450

seq1  GGACACATCTTGCTTAGCATTGCAAAGACAGAGGGAGAGAAGCCTCAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACATCTTGCTTAGCATTGCAAAGACAGAGGGAGAGAAGCCTCAACC  500

seq1  TTGAGGGTCTCAAGTGTCAATTTTATTTCACTCAAAGACAAAAACCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTCTCAAGTGTCAATTTTATTTCACTCAAAGACAAAAACCACAT  550

seq1  TCATTCTGTTGCAAAAAAGGAAAGGGTGGGGGAGCGAGCCCACGCCCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGTTGCAAAAAAGGAAAGGGTGGGGGAGCGAGCCCACGCCCCCC  600

seq1  TAGCTGCAGCCTTTGTCTACACCAGCTTCCTGGAGACACTTTAGAAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCAGCCTTTGTCTACACCAGCTTCCTGGAGACACTTTAGAAGATC  650

seq1  GGCCAATAGTTGCACTGTGGCATGCTGTGTGGCATTCTGTGTTTGACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATAGTTGCACTGTGGCATGCTGTGTGGCATTCTGTGTTTGACAGA  700

seq1  TACTGTTTTTTCCACTTGACTGGTTGTAGATTTTTTTAATAGTTGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTTTTCCACTTGACTGGTTGTAGATTTTTTTAATAGTTGAATTT  750

seq1  GTAAATACATGGAAAAAAAAAATAAAAGAAAGGTAAATCTCTGCCTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATACATGGAAAAAAAAAATAAAAGAAAGGTAAATCTCTGCCTTTTA  800

seq1  CCCATAACAGATTTGTAAGTCACTTGGATGGGAATTTAACTTTATTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAACAGATTTGTAAGTCACTTGGATGGGAATTTAACTTTATTGATG  850

seq1  TTCAGCCAGAGAGGGAGGGAAGGAGG-AAGGGAGA  884
      |||||||||||||||||||||||||| ||||||||
seq2  TTCAGCCAGAGAGGGAGGGAAGGAGGAAAGGGAGA  885