BAC Information

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BAC

Clone NameB6Ng01-268P23
Chromosome10 (Build37)
Map Location 73,925,923 - 73,927,013
singlet/doubletsinglet
Overlap genePcdh15
Upstream geneLOC432471, LOC100039981, LOC623191
Downstream geneEG630453, EG623346, Gnaz, LOC100040057, Rab36, Bcr, Specc1l, LOC100040670, Adora2a, EG544707, Upb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268P23.bB6Ng01-268P23.g
ACCGA071713GA071714
length1,2001,090
definitionB6Ng01-268P23.b B6Ng01-268P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccataatcaccagggaaatgtaaatcaaaacaaccctgagat
tccatctcacactagtcagaatggttaagatcaaaaattcaggtgacagc
agatgctgtcgaggatgtggagaaataggaacactcctccatttttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactacagcaatacctttcctgggcatatatccag
aagatgttccaactagtaagaaagacacatgcaccactatgttcatagca
gccttatttataatagccagaagctggaaagaacccagatgcccctcaac
agacgaatggatacaaaaaatgtggtgcatttacagaatggagtactact
cagctattaaaaagaatgaatttgtgaattcctaggcaaatggatggacc
tggcgggcattatcctgagtgaggtaacccaatcacaaaagaactcaaat
gatatttactcactgataagtggatattagcccagaaacttagaataccc
aagacataagttaaaatttgcaaaacacattatactcaagaagaatgaag
accaaagtgtggacactttgccccttcttagaattgggaacaaaacaccc
atggaaggagttacagagacaattttggagctgagacaaaaggatggacc
atctagatattgccatatccagggatccatcccataatcagcttccaaac
gctgacaccattgcatacactagcaagattttgctgaaaggaccctgata
tagctgtctcatgtgagactatgccggggcctagcaaacacagaagtgga
tgctcacagtcagctattggatggatcacagggcccccaatggaggagct
agagaaagtacccaaggagctaaaggggatctgcaaccttataggtggaa
caacatttataaactaaccagtaccccggagctcttgaaccctagctgca
tatgtatcaaaagatggccctagtggcccatcactggaaagagaggcata
ttggatatgttaactttatagcctcagtacaaggtaaatgccagctaact
gggactgggtgggtagggaatcttctgatatttgatgttcatacaacgtc

gaattctagccaattccacatgtagtcaagttgccatggccagccattgc
acttgacaactaagagagaatcttcagtgatgagtttagttttcgaaaac
tatgaaattatcaaagaatttgacttctatttaagaatgtccccaacgtg
aagcaggaaaacacgccatttgtgtaaaggcatgcacgtcttgacagcac
actcaggagtacagggatgagaggagtcaggaaacataagccaagaaagc
agcaagaaacagaagacagaagaccgacctacaggaaacaaagagcgtaa
gagctcctgcatggaccctggcggccaactgtccttaactgagagcagct
ggaggagggcagggtggccagacaagtcagtgcccgcagcagacagaatt
gtcaacagcatagaggtagaaccatccactgcttcacaccactgtagctc
tcggggggagggtcagaagcggaggagatctatatcccaattggtttatt
tttataaaacacatcgtatttgtcatctctttatattaagtgtccgtgtt
cttttttacttttattttttagtttgttattcatctataaactggccagc
agtacagatatacaacatcctggaatgatattcaatatatttgtcccctc
aaatctaccctttggtctgaacaaaaaatggtttgcgtgattattttaga
ctttcattttgaaaatgaatacataagactcatatttttcttccatctag
ctaacaataacttgaggtcacatcttatttgtaggacgcatggattcaaa
ttacaagctttactggttaaaaaataacacagtgagagatgcctggtgtt
gtttttgttgaaaaccatgggcaacatttggaatgctctgttgaaatact
aaaactcatttttgttcagatcacaaatataaccacaggaagcaaactat
aatgagttttaatgataaaaattaactataggcagagagaaatctttcct
ttgcccatactgccctctagtgtagagttgagcttttttatttactgaat
aatagaacattgcacaccaggaagcttttcattttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_73925923_73927013
seq2: B6Ng01-268P23.g_68_1157

seq1  GAATTCTAGCCAATTCCACATGTAGTCAAGTTGCCATGGCCAGCCATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCCAATTCCACATGTAGTCAAGTTGCCATGGCCAGCCATTGC  50

seq1  ACTTGACAACTAAGAGAGAATCTTCAGTGATGAGTTTAGTTTTCGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACAACTAAGAGAGAATCTTCAGTGATGAGTTTAGTTTTCGAAAAC  100

seq1  TATGAAATTATCAAAGAATTTGACTTCTATTTAAGAATGTCCCCAACGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTATCAAAGAATTTGACTTCTATTTAAGAATGTCCCCAACGTG  150

seq1  AAGCAGGAAAACACGCCATTTGTGTAAAGGCATGCACGTCTTGACAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGAAAACACGCCATTTGTGTAAAGGCATGCACGTCTTGACAGCAC  200

seq1  ACTCAGGAGTACAGGGATGAGAGGAGTCAGGAAACATAAGCCAAGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGTACAGGGATGAGAGGAGTCAGGAAACATAAGCCAAGAAAGC  250

seq1  AGCAAGAAACAGAAGACAGAAGACCGACCTACAGGAAACAAAGAGCGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAAACAGAAGACAGAAGACCGACCTACAGGAAACAAAGAGCGTAA  300

seq1  GAGCTCCTGCATGGACCCTGGCGGCCAACTGTCCTTAACTGAGAGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTGCATGGACCCTGGCGGCCAACTGTCCTTAACTGAGAGCAGCT  350

seq1  GGAGGAGGGCAGGGTGGCCAGACAAGTCAGTGCCCGCAGCAGACAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGCAGGGTGGCCAGACAAGTCAGTGCCCGCAGCAGACAGAATT  400

seq1  GTCAACAGCATAGAGGTAGAACCATCCACTGCTTCACACCACTGTAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAGCATAGAGGTAGAACCATCCACTGCTTCACACCACTGTAGCTC  450

seq1  TCGGGGGGAGGGTCAGAAGCGGAGGAGATCTATATCCCAATTGGTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGGGAGGGTCAGAAGCGGAGGAGATCTATATCCCAATTGGTTTATT  500

seq1  TTTATAAAACACATCGTATTTGTCATCTCTTTATATTAAGTGTCCGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAACACATCGTATTTGTCATCTCTTTATATTAAGTGTCCGTGTT  550

seq1  CTTTTTTACTTTTATTTTTTAGTTTGTTATTCATCTATAAACTGGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTACTTTTATTTTTTAGTTTGTTATTCATCTATAAACTGGCCAGC  600

seq1  AGTACAGATATACAACATCCTGGAATGATATTCAATATATTTGTCCCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGATATACAACATCCTGGAATGATATTCAATATATTTGTCCCCTC  650

seq1  AAATCTACCCTTTGGTCTGAACAAAAAATGGTTTGCGTGATTATTTTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTACCCTTTGGTCTGAACAAAAAATGGTTTGCGTGATTATTTTAGA  700

seq1  CTTTCATTTTGAAAATGAATACATAAGACTCATATTTTTCTTCCATCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTTTGAAAATGAATACATAAGACTCATATTTTTCTTCCATCTAG  750

seq1  CTAACAATAACTTGAGGTCACATCTTATTTGTAGGACGCATGGATTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATAACTTGAGGTCACATCTTATTTGTAGGACGCATGGATTCAAA  800

seq1  TTACAAGCTTTACTGGTTAAAAAATAACACAGTGAGAGATGCCTGGTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGCTTTACTGGTTAAAAAATAACACAGTGAGAGATGCCTGGTGTT  850

seq1  GTTTTTGTTGAAAACCAT-GGCAACATTTGGAATGCTCTGTTGAAATACT  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTTTTGTTGAAAACCATGGGCAACATTTGGAATGCTCTGTTGAAATACT  900

seq1  AAAACTCATTTTTGTTCAGATCAACAAATATAACCACAGGAAGCAAACTA  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAACTCATTTTTGTTCAGATC-ACAAATATAACCACAGGAAGCAAACTA  949

seq1  TAATGAGTTTTAATGAT-AAAATTAACTATAGGGCAGAGGAAGAAATCTT  998
      ||||||||||||||||| ||||||||||||| |||||||  |||||||||
seq2  TAATGAGTTTTAATGATAAAAATTAACTATA-GGCAGAG--AGAAATCTT  996

seq1  TCCTTTTGCCAATACTGCCCTCTAGTGGTAGAGTTGAGCTTTTTTAATTT  1048
      ||| |||||| ||||||||||||||| |||||||||||||||||||  ||
seq2  TCC-TTTGCCCATACTGCCCTCTAGT-GTAGAGTTGAGCTTTTTTA--TT  1042

seq1  AACTGAATAATAGAACATTTGCACACCAGGAGAG-------TTTTTTTTT  1091
       |||||||||||||||| ||||||||||||| ||       |||||||||
seq2  TACTGAATAATAGAACA-TTGCACACCAGGA-AGCTTTTCATTTTTTTTT  1090