BAC Information

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BAC

Clone NameB6Ng01-269A01
Chromosome10 (Build37)
Map Location 62,675,676 - 62,885,058
singlet/doubletdoublet
Overlap gene1700120B22Rik, Herc4, Sirt1, Dnajc12, LOC665182, EG631906
Upstream geneTspan15, Tacr2, Hk1, 2210417K05Rik, Hkdc1, Supv3l1, Vps26a, Srgn, 2510003E04Rik, Ddx21, Ddx50, Stox1, Ccar1, Cxxc6, Slc25a16, Dna2l, Rufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn
Downstream geneCtnna3, Lrrtm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269A01.bB6Ng01-269A01.g
ACCGA071717GA071718
length9251,138
definitionB6Ng01-269A01.b B6Ng01-269A01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,675,676 - 62,676,597)(62,883,937 - 62,885,058)
sequence
gaattcacagcgctttgcctgccttccaagtatgaggattggcaggagcc
aggctttctaactttgagagttggtgttttctggacatggtaactccctg
acaagtaaaggcgacatacaaatggaagaagactttaaaaatcgctttat
tctgctccccccccccattctgctcatctcccaactgctcttcattctga
accaaggatgggttatttaaggcctagcctaaacaaagtctctggtccaa
ggtaatgatcatgtgtgctcatttggatttcctccccttcatcttccggc
ctaggcagtaagcttcaattcaaaatgtggccactaacaggaccatggaa
atagacggtgttgcagagaagctttaagcacaaaaactctgcatggtgaa
caatggactgcagataaatctatttggttgcccacctggtcatagggtag
tattctagtcaagactaagaagacacgacacatattgaagtaagcacacc
acatccgacacgcatgtgcagttgctatatattggaaagccctggtctaa
ttagaaatatgatcaccatgtccggtgacaataggcctcaccaaccattc
ttctgcacgaatcctgtcttcagggaaaagcttccccaacactcccttct
ctcctatccctttgctgtttcttttgcctgtaattaaacaactactggct
gcctgtttctttgaattcctcattcctctgcctgagctcctaagcactgg
gattacaggcatgtgctgccttgccccgctcctcatacattgctgaatta
aactttcattgtatacccaggcaaattccttgaaaatcagagccataaaa
atgttttttaatacatttatttgtgtgtgatttgtgtgtgtatgtccctg
tatgtgtgaatactctcacacacac
gaattccaggacagccagaggtaccaggaggaaccctgtcttgaaaaaaa
atagtaataaaataaatgtttaaatacttttttaaaatcatcttggtgct
ggagagttggctcagtggttaagagaactcattactcttgcagagaacct
gggttccattcccagctctcacacagtggctcacaaccatttgtaactcc
aatcccagaagatcgcagtccctcttctgacctccaggggcaccaggcgt
gcacagagtgcacatacgtatgcgcaggcaaaacactcatacacataaaa
ttgtttttaaaaactaaatcatcttgctgtgcgtggcggtgcacaccttt
agtcccagcactcgtgaagccaggtggatctctttgagttcaagaccacc
ctggtctacagtgtgagttccaggacagccagggctacacagaggatccc
tgtctttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattaaataa
ccttgtacagaaatgttcagacctcctgcctctgcgcccaacgtccgcgt
cgccgatctgcgccgccgtcatggccgacgtggaggacggcgaggaaccc
tgcgtcctttcttcgcactccagctcaggctccaagtcgggaggcaacaa
gatgttctccctcaagaagtggaacgcggtagccatgtggagctgggacg
ttgagtgcgatacctgtgccacctgcagggtccaggtgatggatgcctgt
cttcgatgtcaagctgaaaacaagcaaaaggactgtgtcgtggtctgggg
agagtgtaaccatttccttcccacaactgttgcatgtccctgtgggtgaa
acagaataatcggctgccctctgtgccagcaggactgggtggtccaaaga
atcggccaaatgagagggtgggcccaggcccctcctggtgtggtttgcct
gaccctggacaaccttgccatcaagttacttggacaaagacttaaacact
gcaggggattcatcctttgagagagagaggatgcttggtgtgcccttgag
acctccatccaaaggcaatgcttttatattggtctgttagtttttgggaa
attctctctaccattaaaatactttggttaatggcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_62675676_62676597
seq2: B6Ng01-269A01.b_41_965

seq1  GAATTCACAGCGCTTTGCCTGCCTTCCAAGTATGAGGATTGGCAGGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCGCTTTGCCTGCCTTCCAAGTATGAGGATTGGCAGGAGCC  50

seq1  AGGCTTTCTAACTTTGAGAGTTGGTGTTTTCTGGACATGGTAACTCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTCTAACTTTGAGAGTTGGTGTTTTCTGGACATGGTAACTCCCTG  100

seq1  ACAAGTAAAGGCGACATACAAATGGAAGAAGACTTTAAAAATCGCTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAAGGCGACATACAAATGGAAGAAGACTTTAAAAATCGCTTTAT  150

seq1  TCTGCTCCCCCCCCCCATTCTGCTCATCTCCCAACTGCTCTTCATTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCCCCCCCCCATTCTGCTCATCTCCCAACTGCTCTTCATTCTGA  200

seq1  ACCAAGGATGGGTTATTTAAGGCCTAGCCTAAACAAAGTCTCTGGTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGATGGGTTATTTAAGGCCTAGCCTAAACAAAGTCTCTGGTCCAA  250

seq1  GGTAATGATCATGTGTGCTCATTTGGATTTCCTCCCCTTCATCTTCCGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGATCATGTGTGCTCATTTGGATTTCCTCCCCTTCATCTTCCGGC  300

seq1  CTAGGCAGTAAGCTTCAATTCAAAATGTGGCCACTAACAGGACCATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGTAAGCTTCAATTCAAAATGTGGCCACTAACAGGACCATGGAA  350

seq1  ATAGACGGTGTTGCAGAGAAGCTTTAAGCACAAAAACTCTGCATGGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACGGTGTTGCAGAGAAGCTTTAAGCACAAAAACTCTGCATGGTGAA  400

seq1  CAATGGACTGCAGATAAATCTATTTGGTTGCCCACCTGGTCATAGGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTGCAGATAAATCTATTTGGTTGCCCACCTGGTCATAGGGTAG  450

seq1  TATTCTAGTCAAGACTAAGAAGACACGACACATATTGAAGTAAGCACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAGTCAAGACTAAGAAGACACGACACATATTGAAGTAAGCACACC  500

seq1  ACATCCGACACGCATGTGCAGTTGCTATATATTGGAAAGCCCTGGTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCGACACGCATGTGCAGTTGCTATATATTGGAAAGCCCTGGTCTAA  550

seq1  TTAGAAATATGATCACCATGTCCGGTGACAATAGGCCTCACCAACCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATATGATCACCATGTCCGGTGACAATAGGCCTCACCAACCATTC  600

seq1  TTCTGCACGAATCCTGTCTTCAGGGAAAAGCTTCCCCAACACTCCCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACGAATCCTGTCTTCAGGGAAAAGCTTCCCCAACACTCCCTTCT  650

seq1  CTCCTATCCCTTTGCTGTTTCTTTTGCCTGTAATTAAACAACTACTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATCCCTTTGCTGTTTCTTTTGCCTGTAATTAAACAACTACTGGCT  700

seq1  GCCTGTTTCTTTGAATTCCTCATTCCTCTGCCTGAGCTCCTAAGCACTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTCTTTGAATTCCTCATTCCTCTGCCTGAGCTCCTAAGCACTGG  750

seq1  GATTACAGGCATGTGCTGCCTTGCCCCGCTCCTCATACATTGCTGAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGGCATGTGCTGCCTTGCCCCGCTCCTCATACATTGCTGAATTA  800

seq1  AACTTTCATTGTATACCCAGGCAAATTCCTTGAAAATCAGAGCCATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCATTGTATACCCAGGCAAATTCCTTGAAAATCAGAGCCATAAAA  850

seq1  ATGTTTTTTAATACATTTATTTGTGTGTGATTTGTGTGTGTATGT-CCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGTTTTTTAATACATTTATTTGTGTGTGATTTGTGTGTGTATGTCCCTG  900

seq1  TATGTGTGTATACACACACACAC--  922
      |||||||| |||| | |||||||  
seq2  TATGTGTGAATACTCTCACACACAC  925

seq1: chr10_62883937_62885058
seq2: B6Ng01-269A01.g_63_1200 (reverse)

seq1  AAGGCCATTTTTAACAAATTATTTTAATTGT--AGAGAATTTCCCAAAAC  48
      |||||||  || | |||| ||||||||| ||  |||||||||||||||| 
seq2  AAGGCCA--TTAACCAAAGTATTTTAATGGTAGAGAGAATTTCCCAAAAA  48

seq1  TAAACAGACAAATTAATAAAGCA-TGCCTTT-GATG--AGTCTCAAAGGC  94
        ||||||| || ||  |||||| ||||||| ||||   ||||||| |||
seq2  CTAACAGACCAA-TATAAAAGCATTGCCTTTGGATGGAGGTCTCAAGGGC  97

seq1  ACAC--AGCATCCTCTCTCTCTC-AAGGATGAATCCCCTGCAGTGTTT-A  140
      ||||  ||||||||||||||||| |||||||||||||||||||||||| |
seq2  ACACCAAGCATCCTCTCTCTCTCAAAGGATGAATCCCCTGCAGTGTTTAA  147

seq1  GTCTTTGTCC-AGTAACTTGATGGCAAGGTTGTCCAGGGTCAG--CAACC  187
      |||||||||| ||||||||||||||||||||||||||||||||   ||||
seq2  GTCTTTGTCCAAGTAACTTGATGGCAAGGTTGTCCAGGGTCAGGCAAACC  197

seq1  ACACCAGGA-GCGCCTGGGCC--ACCTCTCATTT-GCCGATTCTTTGGAC  233
      ||||||||| | |||||||||   |||||||||| |||||||||||||||
seq2  ACACCAGGAGGGGCCTGGGCCCACCCTCTCATTTGGCCGATTCTTTGGAC  247

seq1  CACCCAGTCCTGCTGGCACAGAGGGCAG-CGATTATTCTGTTTCACCCAC  282
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CACCCAGTCCTGCTGGCACAGAGGGCAGCCGATTATTCTGTTTCACCCAC  297

seq1  AGGGACATGCAACAGTTGT-GGAAGG-AATGGTTACACTCTCCCCAGACC  330
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  AGGGACATGCAACAGTTGTGGGAAGGAAATGGTTACACTCTCCCCAGACC  347

seq1  ACGACACAGTCCTTTTGCTTGTTTTCAGCTTGACATCGAAGACAGGCATC  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACACAGTCCTTTTGCTTGTTTTCAGCTTGACATCGAAGACAGGCATC  397

seq1  CATCACCTGGACCCTGCAGGTGGCACAGGTATCGCACTCAACGTCCCAGC  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCTGGACCCTGCAGGTGGCACAGGTATCGCACTCAACGTCCCAGC  447

seq1  TCCACATGGCTACCGCGTTCCACTTCTTGAGGGAGAACATCTTGTTGCCT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGGCTACCGCGTTCCACTTCTTGAGGGAGAACATCTTGTTGCCT  497

seq1  CCCGACTTGGAGCCTGAGCTGGAGTGCGAAGAAAGGACGCAGGGTTCCTC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACTTGGAGCCTGAGCTGGAGTGCGAAGAAAGGACGCAGGGTTCCTC  547

seq1  GCCGTCCTCCACGTCGGCCATGACGGCGGCGCAGATCGGCGACGCGGACG  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCCTCCACGTCGGCCATGACGGCGGCGCAGATCGGCGACGCGGACG  597

seq1  TTGGGCGCAGAGGCAGGAGGTCTGAACATTTCTGTACAAGGTTATTTAAT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGGGCGCAGAGGCAGGAGGTCTGAACATTTCTGTACAAGGTTATTTAA-  646

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGACAGGGATCCT  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGACAGGGATCCT  696

seq1  CTGTGTAGCCCTGGCTGTCCTGGAACTCACACTGTAGACCAGGGTGGTCT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGCCCTGGCTGTCCTGGAACTCACACTGTAGACCAGGGTGGTCT  746

seq1  TGAACTCAAAGAGATCCACCTGGCTTCACGAGTGCTGGGACTAAAGGTGT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAAAGAGATCCACCTGGCTTCACGAGTGCTGGGACTAAAGGTGT  796

seq1  GCACCGCCACGCACAGCAAGATGATTTAGTTTTTAAAAACAATTTTATGT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCGCCACGCACAGCAAGATGATTTAGTTTTTAAAAACAATTTTATGT  846

seq1  GTATGAGTGTTTTGCCTGCGCATACGTATGTGCACTCTGTGCACGCCTGG  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGTGTTTTGCCTGCGCATACGTATGTGCACTCTGTGCACGCCTGG  896

seq1  TGCCCCTGGAGGTCAGAAGAGGGACTGCGATCTTCTGGGATTGGAGTTAC  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGGAGGTCAGAAGAGGGACTGCGATCTTCTGGGATTGGAGTTAC  946

seq1  AAATGGTTGTGAGCCACTGTGTGAGAGCTGGGAATGGAACCCAGGTTCTC  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTGTGAGCCACTGTGTGAGAGCTGGGAATGGAACCCAGGTTCTC  996

seq1  TGCAAGAGTAATGAGTTCTCTTAACCACTGAGCCAACTCTCCAGCACCAA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGTAATGAGTTCTCTTAACCACTGAGCCAACTCTCCAGCACCAA  1046

seq1  GATGATTTTAAAAAAGTATTTAAACATTTATTTTATTACTATTTTTTTTC  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTTAAAAAAGTATTTAAACATTTATTTTATTACTATTTTTTTTC  1096

seq1  AAGACAGGGTTCCTCCTGGTACCTCTGGCTGTCCTGGAATTC  1122
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGTTCCTCCTGGTACCTCTGGCTGTCCTGGAATTC  1138