BAC Information

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BAC

Clone NameB6Ng01-269D09
Chromosome10 (Build37)
Map Location 100,164,481 - 100,165,633
singlet/doubletsinglet
Overlap genenone
Upstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269D09.bB6Ng01-269D09.g
ACCGA071869GA071870
length6511,154
definitionB6Ng01-269D09.b B6Ng01-269D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaaaaattggagagggatggccttttgagtgctcctgctgac
tgttgtgtgtggaggaatgctttggtggatggcatgtatgtgaaggcagc
acagggctgataaacaagccttagagccctctatggcagccttggaagca
ggaacatcctccaaatgttggctcaacatgctggatcagtaatcaaagat
gggtaagaccctcacgtgcacataccaaactaagacaggatggtggaagt
gagtttgtcactcccatgacgggtaaggatgtggcaaggatgggggcaac
ctaagacagatgttgatcccagagctactaataaaactaaaaggggagat
gcgggaagcaggtgcggccatgggcctcgtgaaacccacttgtttactgc
cttgcctgaacatgctcagtgaggctgcatgcgtgggctgcctgccagac
tgcactgttccttgtgatccggaactgtcagcctatctgtgaatgatctg
agtacatgcctggagcgtgtgtgaattctgattggatgagatgggatgag
atggggtggagctagaaggaggtgagcagtaaagagtagtagtattttag
ttttagcccttgttgtgagttataagtattatatgagaagcttggttata
t
gaattctcataatgagctttaaatcatgccttcaagctcacagtggttgt
ctatgtgaatgggtggccccaggatgctggacttctacagaataaacact
ctttgctgttacatactatctgagtccagggtatcattcttctgcgaatc
atggacccttataacaggaatgagaatccgaagagaaggcccatgggaag
gaagcagggaggcacaagaaggtttctgggcatcctcgataaaatgagac
tgcgagttaagtgtgtaagtaagactgtgtggctctggtcgctacaagag
gaagtggtttcttctctagagttttcaggataacagctcccccggaagct
gactacagtagatatagaagccaagaactttagggtgatcataaattcct
gctgcttacacccacaagcttgccatacattataatagcaaatcaaaatg
cttcagagagaaggacttgttcaggtgagcagggaagtgccttctttccc
aatcagttcctaagagttagaaatagataaaaatgctgacaccatcgatt
caagaaagttaaaccgtgctggaagttagcagttaggatatctgactttg
ggatataaaatatatcgaagctgggctttataatttgatcataactcttc
ctcagtttcaataactttcttatttgcccttacagctcttggaaaagagt
caaaacctttgtaaagaaatattattgtgctgagaaaagagcagaagagc
aaaatcctgtttaaattaaaatgaattgagtggaactttttttttaaagg
tgcatagaagagcaaagtggctttgtctgatctcatctttcttcttagtc
cctctgacctcctgtgccaatgggggtcacagagaactgtttagcattct
cttttgtgaatcctcttgaaagagcccaagaacacacacaaaaaaattca
tactgtctaaaagttcataaatctcttttcaaaaacttcaggagacatat
gcacaggagaatcgagaaatggtaagaccgttcatttgtccttattgcta
gaatactatttcagggaatgaacccacatgatatggtatcattgggaaga
tggctggcccaatagtgattgattggaacgtttccagttctctgttcacg
tcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100164481_100165633
seq2: B6Ng01-269D09.g_67_1220

seq1  GAATTCTCATAATGAGCTTTAAATCATGCCTTCAAGCTCACAGTGGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATAATGAGCTTTAAATCATGCCTTCAAGCTCACAGTGGTTGT  50

seq1  CTATGTGAATGGGTGGCCCCAGGATGCTGGACTTCTACAGAATAAACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGAATGGGTGGCCCCAGGATGCTGGACTTCTACAGAATAAACACT  100

seq1  CTTTGCTGTTACATACTATCTGAGTCCAGGGTATCATTCTTCTGCGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGTTACATACTATCTGAGTCCAGGGTATCATTCTTCTGCGAATC  150

seq1  ATGGACCCTTATAACAGGAATGAGAATCCGAAGAGAAGGCCCATGGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCCTTATAACAGGAATGAGAATCCGAAGAGAAGGCCCATGGGAAG  200

seq1  GAAGCAGGGAGGCACAAGAAGGTTTCTGGGCATCCTCGATAAAATGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGGAGGCACAAGAAGGTTTCTGGGCATCCTCGATAAAATGAGAC  250

seq1  TGCGAGTTAAGTGTGTAAGTAAGACTGTGTGGCTCTGGTCGCTACAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGTTAAGTGTGTAAGTAAGACTGTGTGGCTCTGGTCGCTACAAGAG  300

seq1  GAAGTGGTTTCTTCTCTAGAGTTTTCAGGATAACAGCTCCCCCGGAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTTTCTTCTCTAGAGTTTTCAGGATAACAGCTCCCCCGGAAGCT  350

seq1  GACTACAGTAGATATAGAAGCCAAGAACTTTAGGGTGATCATAAATTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAGTAGATATAGAAGCCAAGAACTTTAGGGTGATCATAAATTCCT  400

seq1  GCTGCTTACACCCACAAGCTTGCCATACATTATAATAGCAAATCAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTACACCCACAAGCTTGCCATACATTATAATAGCAAATCAAAATG  450

seq1  CTTCAGAGAGAAGGACTTGTTCAGGTGAGCAGGGAAGTGCCTTCTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGAGAAGGACTTGTTCAGGTGAGCAGGGAAGTGCCTTCTTTCCC  500

seq1  AATCAGTTCCTAAGAGTTAGAAATAGATAAAAATGCTGACACCATCGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTCCTAAGAGTTAGAAATAGATAAAAATGCTGACACCATCGATT  550

seq1  CAAGAAAGTTAAACCGTGCTGGAAGTTAGCAGTTAGGATATCTGACTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGTTAAACCGTGCTGGAAGTTAGCAGTTAGGATATCTGACTTTG  600

seq1  GGATATAAAATATATCGAAGCTGGGCTTTATAATTTGATCATAACTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAAAATATATCGAAGCTGGGCTTTATAATTTGATCATAACTCTTC  650

seq1  CTCAGTTTCAATAACTTTCTTATTTGCCCTTACAGCTCTTGGAAAAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTCAATAACTTTCTTATTTGCCCTTACAGCTCTTGGAAAAGAGT  700

seq1  CAAAACCTTTGTAAAGAAATATTATTGTGCTGAGAAAAGAGCAGAAGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTTTGTAAAGAAATATTATTGTGCTGAGAAAAGAGCAGAAGAGC  750

seq1  AAAATCCTGTTTAAATTAAAATGAATTGAGTGGAAC-TTTTTTTTAAAGG  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAATCCTGTTTAAATTAAAATGAATTGAGTGGAACTTTTTTTTTAAAGG  800

seq1  TGCATAGAAGAGCAAAGTGGCTTTGTCTGATCTCATCTTTCTTCTTAGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGAAGAGCAAAGTGGCTTTGTCTGATCTCATCTTTCTTCTTAGTC  850

seq1  CCTCTGACCTCCTGTGCCAAT-GGGGTCACAGAGAACTGTTTAGCATTCT  898
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTCTGACCTCCTGTGCCAATGGGGGTCACAGAGAACTGTTTAGCATTCT  900

seq1  CTTTTGTGAATCCTCTTGAAAGAGCCCAAGAACACACACAAAAAAATTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGAATCCTCTTGAAAGAGCCCAAGAACACACACAAAAAAATTCA  950

seq1  TACTGTCTAAAAGTTCAATAAATCTCTTTTCAAAAACTTCA-GAGACATA  997
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TACTGTCTAAAAGTTC-ATAAATCTCTTTTCAAAAACTTCAGGAGACATA  999

seq1  TGCACAAGAGAAATCGAGAAAATGTAAGACCGTTCATTTGTCCTTATTGC  1047
      |||||| ||| ||||||||||  |||||||||||||||||||||||||||
seq2  TGCACAGGAG-AATCGAGAAATGGTAAGACCGTTCATTTGTCCTTATTGC  1048

seq1  TAG-ATACTATTTCAGGGGATG-ACCCACATGATATTGGTATAATGGGAA  1095
      ||| |||||||||||||| ||| |||||||||||| |||||| || || |
seq2  TAGAATACTATTTCAGGGAATGAACCCACATGATA-TGGTATCATTGGGA  1097

seq1  AGAATGGCT-GCGCAATAGGTGATTGATTGGAACGTTTTCCATTTCTCTG  1144
      || |||||| || ||||| |||||||||||||||| |||||| |||||||
seq2  AG-ATGGCTGGCCCAATA-GTGATTGATTGGAACG-TTTCCAGTTCTCTG  1144

seq1  -TCACGTCAA  1153
       |||||||||
seq2  TTCACGTCAA  1154