BAC Information

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BAC

Clone NameB6Ng01-269E14
Chromosome10 (Build37)
Map Location 119,882,673 - 120,036,554
singlet/doubletdoublet
Overlap geneHmga2
Upstream geneGrip1, Helb, Irak3, Tmbim4, 1190005P17Rik
Downstream geneLOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269E14.bB6Ng01-269E14.g
ACCGA071925GA071926
length7821,141
definitionB6Ng01-269E14.b B6Ng01-269E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,035,773 - 120,036,554)(119,882,673 - 119,883,818)
sequence
gaattcagtccggtaacctggtttcctccatgagatccgtagctcagaca
tggtggtttgggaacaatatgagtagaaatcctgtatgttattcttggac
atttaaatgaatgttatttctagctaaactgcatttaaggatagaatttt
atttttttggtattattttgtgtaacgttgcctagaaatgcagttgccaa
ctaatctttgaaaatgatgtggtcaaataattatcactcaagcaatgaga
atcccattattacagacaaacaataaatgaagtcctgttttaaatagtaa
ttttcaagatgacgaataagactagaatatttaatagatttttcgtatat
ttcatgcaagaattgacttcaaatatactatcttctaaaagtattgaaat
tctctagttttaatacttaactggtttcaagtgctacatttcttttgtac
ctgggagacctacagttgcatctgacatcagtaaacatgagattcataag
attaggcagatggttcccctaataaaatgttcaccatacaagccggagga
cctgagttcaatccccacccccacatgaaaagccagacactcgggcacac
atacataatctcagagctggggaggcaggggcagatacattcctgggact
tcctgctagctaaagaggtgagccctgggtcccagtgagaggccctgttt
caaaaaacaaggtatctggctcctaaggacagcacaggggttagcttctg
tttagacatgcatgtatacatatgtgtgtgtg
gaattcactctttaagattttgttttccgggatagaaagatggctcaaga
gttaagagcatttgctctttgttcagaggacccaggttcaattcccagca
cccacaggttgactcacaaccatatatataactccaattctggagacttt
gacaacctaccctcttctggcagacacacacaaggtactcagacaaaata
cccatacacataaaataaaacaaaaacattaaaaattgccacagatgggc
tggtgagatggctcagtgggtaagagcacccgactgctcttccgaaggtc
cagagttcaaatcccagcaaccacatggtggctcacaaccatccataacg
agatctgactccctcttctggagtgtgtgaagacagctacagtgtattta
cataaaataataaataaatctttaaaaaaaaattgccacagatacacaag
gtacttaaatcatgcaaatggatacattcatggatgatcgtagacagagg
acactgaaaatagtgttttgaaaaggaaagaaatgtactttcatagtgaa
ctacattcatggatcgatgaacaaaatataaagaagtctgatttgccaaa
caggagctcagttttgtcctccgtgatcagcaaatatttttttttcctgt
aactgtcggcttcctctactcagttactgcctaatgatctgttgaagtga
taccatctccttcccggtccgcagaagtgccctcccccacccacatgacc
atgctccatcttctagagcggcatcttatgcccgtgaccttgaacaaagc
ctaagcgagagagcctggtcactctgtcttgaaagatttcctttccaaca
tctgctgcttcctattttgcaatctcacttgcaacagtggtccttcttgt
catagatattatgtgtctacgtgtcagagccagagattagcgagagcagc
tactctttggggtaattgatgacatacactgcagaaatacatttgatttt
tttgtttttgttttttgtttttaaaaaacctttaattgcatggcttagga
aggcaattttgtggagattggaggtagaccattgtgtgcattccagtatc
tctcattcatgaatttgaacccaggagcctacctatttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_120035773_120036554
seq2: B6Ng01-269E14.b_47_828 (reverse)

seq1  CACACACACATATGTATACATGCATGTCTAAACAGAAGCTAACCCCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATATGTATACATGCATGTCTAAACAGAAGCTAACCCCTGTG  50

seq1  CTGTCCTTAGGAGCCAGATACCTTGTTTTTTGAAACAGGGCCTCTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTAGGAGCCAGATACCTTGTTTTTTGAAACAGGGCCTCTCACTG  100

seq1  GGACCCAGGGCTCACCTCTTTAGCTAGCAGGAAGTCCCAGGAATGTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAGGGCTCACCTCTTTAGCTAGCAGGAAGTCCCAGGAATGTATCT  150

seq1  GCCCCTGCCTCCCCAGCTCTGAGATTATGTATGTGTGCCCGAGTGTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGCCTCCCCAGCTCTGAGATTATGTATGTGTGCCCGAGTGTCTGG  200

seq1  CTTTTCATGTGGGGGTGGGGATTGAACTCAGGTCCTCCGGCTTGTATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATGTGGGGGTGGGGATTGAACTCAGGTCCTCCGGCTTGTATGGT  250

seq1  GAACATTTTATTAGGGGAACCATCTGCCTAATCTTATGAATCTCATGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTTATTAGGGGAACCATCTGCCTAATCTTATGAATCTCATGTTT  300

seq1  ACTGATGTCAGATGCAACTGTAGGTCTCCCAGGTACAAAAGAAATGTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGTCAGATGCAACTGTAGGTCTCCCAGGTACAAAAGAAATGTAGC  350

seq1  ACTTGAAACCAGTTAAGTATTAAAACTAGAGAATTTCAATACTTTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAACCAGTTAAGTATTAAAACTAGAGAATTTCAATACTTTTAGAA  400

seq1  GATAGTATATTTGAAGTCAATTCTTGCATGAAATATACGAAAAATCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTATATTTGAAGTCAATTCTTGCATGAAATATACGAAAAATCTATT  450

seq1  AAATATTCTAGTCTTATTCGTCATCTTGAAAATTACTATTTAAAACAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCTAGTCTTATTCGTCATCTTGAAAATTACTATTTAAAACAGGA  500

seq1  CTTCATTTATTGTTTGTCTGTAATAATGGGATTCTCATTGCTTGAGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTATTGTTTGTCTGTAATAATGGGATTCTCATTGCTTGAGTGAT  550

seq1  AATTATTTGACCACATCATTTTCAAAGATTAGTTGGCAACTGCATTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTGACCACATCATTTTCAAAGATTAGTTGGCAACTGCATTTCTA  600

seq1  GGCAACGTTACACAAAATAATACCAAAAAAATAAAATTCTATCCTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACGTTACACAAAATAATACCAAAAAAATAAAATTCTATCCTTAAAT  650

seq1  GCAGTTTAGCTAGAAATAACATTCATTTAAATGTCCAAGAATAACATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTAGCTAGAAATAACATTCATTTAAATGTCCAAGAATAACATACA  700

seq1  GGATTTCTACTCATATTGTTCCCAAACCACCATGTCTGAGCTACGGATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTACTCATATTGTTCCCAAACCACCATGTCTGAGCTACGGATCT  750

seq1  CATGGAGGAAACCAGGTTACCGGACTGAATTC  782
      ||||||||||||||||||||||||||||||||
seq2  CATGGAGGAAACCAGGTTACCGGACTGAATTC  782

seq1: chr10_119882673_119883818
seq2: B6Ng01-269E14.g_67_1207

seq1  GAATTCACTCTTTAAGATTTTGTTTTCCGGGATAGAAAGATGGCTCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTTAAGATTTTGTTTTCCGGGATAGAAAGATGGCTCAAGA  50

seq1  GTTAAGAGCATTTGCTCTTTGTTCAGAGGACCCAGGTTCAATTCCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAGCATTTGCTCTTTGTTCAGAGGACCCAGGTTCAATTCCCAGCA  100

seq1  CCCACAGGTTGACTCACAACCATATATATAACTCCAATTCTGGAGACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGGTTGACTCACAACCATATATATAACTCCAATTCTGGAGACTTT  150

seq1  GACAACCTACCCTCTTCTGGCAGACACACACAAGGTACTCAGACAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCTACCCTCTTCTGGCAGACACACACAAGGTACTCAGACAAAATA  200

seq1  CCCATACACATAAAATAAAACAAAAACATTAAAAATTGCCACAGATGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACACATAAAATAAAACAAAAACATTAAAAATTGCCACAGATGGGC  250

seq1  TGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC  300

seq1  CAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACG  350

seq1  AGATCTGACTCCCTCTTCTGGAGTGTGTGAAGACAGCTACAGTGTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGACTCCCTCTTCTGGAGTGTGTGAAGACAGCTACAGTGTATTTA  400

seq1  CATAAAATAATAAATAAATCTTTAAAAAAAAATTGCCACAGATACACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATAATAAATAAATCTTTAAAAAAAAATTGCCACAGATACACAAG  450

seq1  GTACTTAAATCATGCAAATGGATACATTCATGGATGATCGTAGACAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTAAATCATGCAAATGGATACATTCATGGATGATCGTAGACAGAGG  500

seq1  ACACTGAAAATAGTGTTTTGAAAAGGAAAGAAATGTACTTTCATAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAAATAGTGTTTTGAAAAGGAAAGAAATGTACTTTCATAGTGAA  550

seq1  CTACATTCATGGATCGATGAACAAAATATAAAGAAGTCTGATTTGCCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTCATGGATCGATGAACAAAATATAAAGAAGTCTGATTTGCCAAA  600

seq1  CAGGAGCTCAGTTTTGTCCTCCGTGATCAGCAAATATTTTTTTTTCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTCAGTTTTGTCCTCCGTGATCAGCAAATATTTTTTTTTCCTGT  650

seq1  AACTGTCGGCTTCCTCTACTCAGTTACTGCCTAATGATCTGTTGAAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCGGCTTCCTCTACTCAGTTACTGCCTAATGATCTGTTGAAGTGA  700

seq1  TACCATCTCCTTCCCGGTCCGCAGAAGTGCCCTCCCCCACCCACATGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCTCCTTCCCGGTCCGCAGAAGTGCCCTCCCCCACCCACATGACC  750

seq1  ATGCTCCATCTTCTAGAGCGGCATCTTATGCCCGTGACCTTGAACAAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCATCTTCTAGAGCGGCATCTTATGCCCGTGACCTTGAACAAAGC  800

seq1  CTAAGCGAGAGAGCCTGGTCACTCTGTCTTGAAAGATTTCCTTTCCAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCGAGAGAGCCTGGTCACTCTGTCTTGAAAGATTTCCTTTCCAACA  850

seq1  TCTGCTGCTTCCTATTTTGCAATCTCACTTGCAAACAGTGGTCC-TCTTG  899
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  TCTGCTGCTTCCTATTTTGCAATCTCACTTGC-AACAGTGGTCCTTCTTG  899

seq1  TCATAGATATTTATGTGTCTACGTGTCAGGAGCCAAGAGATTAGCGAGAG  949
      ||||||||| |||||||||||||||||| ||||| |||||||||||||||
seq2  TCATAGATA-TTATGTGTCTACGTGTCA-GAGCC-AGAGATTAGCGAGAG  946

seq1  CAGCTACTCTTTGGGGTAATTGATGACATAACACTGCAGAAATACATTTG  999
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGCTACTCTTTGGGGTAATTGATGACAT-ACACTGCAGAAATACATTTG  995

seq1  ATTTTTTGTTTTTTGTTTTTTGTTTTTTTAAAAAACTTTTAATTGCATGG  1049
      |||||||  |||||||||||||  |||||||||||| |||||||||||||
seq2  ATTTTTTTGTTTTTGTTTTTTG--TTTTTAAAAAACCTTTAATTGCATGG  1043

seq1  TTTTAAGAA-GCCATTTTGT-GAGATTTGA-GTAGACCATTGTGTGCTTT  1096
        ||| ||| || ||||||| |||||| || |||||||||||||||| ||
seq2  -CTTAGGAAGGCAATTTTGTGGAGATTGGAGGTAGACCATTGTGTGCATT  1092

seq1  TCTTTTTCTTCTCCATTCAATGAATTTGAACACAGAAG-CTA-CTATTTA  1144
       |  | || ||| ||||| |||||||||||| ||| || ||| |||||||
seq2  CCAGTATC-TCT-CATTC-ATGAATTTGAACCCAGGAGCCTACCTATTTA  1139

seq1  AT  1146
      ||
seq2  AT  1141