BAC Information

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BAC

Clone NameB6Ng01-269F10
Chromosome10 (Build37)
Map Location 16,034,149 - 16,181,361
singlet/doubletdoublet
Overlap geneLOC382457
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269F10.bB6Ng01-269F10.g
ACCGA071963GA071964
length1,1501,093
definitionB6Ng01-269F10.b B6Ng01-269F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,180,205 - 16,181,361)(16,034,149 - 16,035,246)
sequence
gaattctgtggcttgaatacagtttatctccacccaaagccatggtgtga
tgcccctcggctcagcagtgttgagaggcacagtctagtggaaggctttt
gaagtgtggaggcaaaatcatcatggatgaattaatgtgttgattgtaga
aatgtattggccatctcataaatcagacattttctcacctgcacatcttg
ccctgctgctactgctcagtggaaactgtctggatgtagttactcaaatt
ctggtctccgtaacctccagtactacagacaaaagtatacctaatgttaa
aacttttactatctaggtcttaatatctgttatagatacataacagagat
ataaaagggagtattgagatatgtaaaagacaaaatgatgatgtaatcag
taagttaataacacaagacagggtatgctagaataaatgatcaaacaagc
ggtaatttgttgaatggcatacagatgtacatttacactgcataacatat
gaaagggggggtggttggcacattagggtgtgattgctaactttggttgt
caatttattgcatctggtatcaacaaagacaaagctctgggcatgcccca
gtgtatcttttaatgaattgatagaggagcttttacctagactgggaagc
aacttccagcagttgcccaggttttaaagaaattcaaggaaaaagtgtgc
agcccactgttgagctgttgctgctgttgtcgctgctgctgctgctgctg
ctgttacctccagcctttactaacttcagaactcagctgcattcagcttt
ccattgcggacactcagacaagtggctctcccagttctcctggcttttat
taccagattggggttctgagttaggatcccaggtcctccagtatgcagca
tttttggatacctagcctcaaatgtaagtcagactagtccagtttatgat
atattactcattccatcagctccatccctgtagatagcctgagtatttac
tgcctttatgccaccttgaagaatgcattgaccatcacacctcataggat
tgctttattttatactccttacaggacttgcccattcttacatctaagca
tatgatgcatgcttcatatactttccagaatgtacattggttacgtcatg


gaattctttcagagtgtgaaatatcagaagaagaagtccactcagaaaaa
aatgaagaaggaagatgtgggcagggattctgtgagggagggtactgaga
agggggaagcattttggatataaacacacaaacaaacaaatacataaatg
aaaaagaaaaaatcattccaacttgatcatcattattatttattagtatt
attatcattttactaatattaacacatttaataagtaattaatctcaaat
aaggaaacaaaaagagtgcaattaaatcttccttaggatacagttctaac
attcacacacacttgactccacagatgagagtttcaataatctccttgga
gtctaggccaatcattcacccagcataagaagtatctccttttcacttca
aaagttatgaagaacccaaagattttattagtatttttccctaatggagc
tttccttctctctcctgatgaaaacttttcttgcttttgaaatgaggatc
tgtgccaacagagaagtccatgaaagaatagcaaacgcaaagtgtaaaag
tggatttctgaaagtgactgccctcagaagagcccaatgaagttgctctc
ataaatcctatttactgggcttttactacccatgaaaatgaaaaataaaa
aggaatcaaatgcatacctgctgcactttcctcaggaataaattttagcc
ataacaacagggtgatattgtatatcaactatataatatttcatatttaa
atactgtgattatattgcaagcatttctgtacaataatcataaatgattc
atatagatcctaagactacactccacccaatctatttgctcactatttcc
aattgttcaagaactttaaatgatgatatttttaataaattttattaaga
tttagtttttgccttctagaatttctgcattacgttcatctttatctgac
cttattatatctattctggatattattttttcaagcattgaagattagac
atattcattttgtgataataaatatggtatagatatccagagtaaaaatg
taaatcatgctcacattgatgatatactaatgatattagtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16180205_16181361
seq2: B6Ng01-269F10.b_46_1195 (reverse)

seq1  CATGACGTAAACAAATGTACATTCTAGAAAGTAATTATGAAGCATGCATC  50
      |||||||| ||| |||||||||||| |||||||  |||||||||||||||
seq2  CATGACGT-AACCAATGTACATTCTGGAAAGTA--TATGAAGCATGCATC  47

seq1  ATATGCTAAAATTGATAAG-ATGGGCAAAGTCCTGT-AGGAGTATAAAAT  98
      ||||||| | ||   |||| |||||| ||||||||| |||||||||||||
seq2  ATATGCTTAGAT--GTAAGAATGGGC-AAGTCCTGTAAGGAGTATAAAAT  94

seq1  AAAGCAAATTCTATGA-GTGTGATTGTCAATGCATTTCTTTCAAG--TGC  145
      ||||| ||| |||||| ||||||| |||||||||||   ||||||   ||
seq2  AAAGC-AATCCTATGAGGTGTGATGGTCAATGCATT--CTTCAAGGTGGC  141

seq1  ATAAAAGCCAGTAATTACTCAGGCTTTTCTACAGGGATGGAGCTGATGGA  195
      || |||| |||||| ||||||||| | |||||||||||||||||||||||
seq2  AT-AAAGGCAGTAAATACTCAGGC-TATCTACAGGGATGGAGCTGATGGA  189

seq1  ATGAGT-ATATATCATAAACTGGACTAGTCTGACTTACATTTGAGGCTAG  244
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAATATATCATAAACTGGACTAGTCTGACTTACATTTGAGGCTAG  239

seq1  GTATCCAAAAATGCCTGCATACTGGAGGACCTGGGATCCTAACTCAGAAC  294
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTATCCAAAAATG-CTGCATACTGGAGGACCTGGGATCCTAACTCAGAAC  288

seq1  CCCAATCTGGTAATAAAAGCCAGGAGAACTTGGAGAGCCACTTGTCCTGA  344
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  CCCAATCTGGTAATAAAAGCCAGGAGAACTGGGAGAGCCACTTGT-CTGA  337

seq1  GTGTCCGCAATGGAAAGCTGAATGCAGCTGAGTTCTGAAGTTAGTAAAGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCGCAATGGAAAGCTGAATGCAGCTGAGTTCTGAAGTTAGTAAAGG  387

seq1  CTGGAGGTAACAGCAGCAGCAGCAGCAGCAGCGACAACAGCAGCAACAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTAACAGCAGCAGCAGCAGCAGCAGCGACAACAGCAGCAACAGC  437

seq1  TCAACAGTGGGCTGCACACTTTTTCCTTGAATTTCTTTAAAACCTGGGCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGTGGGCTGCACACTTTTTCCTTGAATTTCTTTAAAACCTGGGCA  487

seq1  ACTGCTGGAAGTTGCTTCCCAGTCTAGGTAAAAGCTCCTCTATCAATTCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGAAGTTGCTTCCCAGTCTAGGTAAAAGCTCCTCTATCAATTCA  537

seq1  TTAAAAGATACACTGGGGCATGCCCAGAGCTTTGTCTTTGTTGATACCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGATACACTGGGGCATGCCCAGAGCTTTGTCTTTGTTGATACCAG  587

seq1  ATGCAATAAATTGACAACCAAAGTTAGCAATCACACCCTAATGTGCCAAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATAAATTGACAACCAAAGTTAGCAATCACACCCTAATGTGCCAAC  637

seq1  CACCCCCCCTTTCATATGTTATGCAGTGTAAATGTACATCTGTATGCCAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCTTTCATATGTTATGCAGTGTAAATGTACATCTGTATGCCAT  687

seq1  TCAACAAATTACCGCTTGTTTGATCATTTATTCTAGCATACCCTGTCTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAATTACCGCTTGTTTGATCATTTATTCTAGCATACCCTGTCTTG  737

seq1  TGTTATTAACTTACTGATTACATCATCATTTTGTCTTTTACATATCTCAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTAACTTACTGATTACATCATCATTTTGTCTTTTACATATCTCAA  787

seq1  TACTCCCTTTTATATCTCTGTTATGTATCTATAACAGATATTAAGACCTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCTTTTATATCTCTGTTATGTATCTATAACAGATATTAAGACCTA  837

seq1  GATAGTAAAAGTTTTAACATTAGGTATACTTTTGTCTGTAGTACTGGAGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAAAAGTTTTAACATTAGGTATACTTTTGTCTGTAGTACTGGAGG  887

seq1  TTACGGAGACCAGAATTTGAGTAACTACATCCAGACAGTTTCCACTGAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGGAGACCAGAATTTGAGTAACTACATCCAGACAGTTTCCACTGAGC  937

seq1  AGTAGCAGCAGGGCAAGATGTGCAGGTGAGAAAATGTCTGATTTATGAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGCAGGGCAAGATGTGCAGGTGAGAAAATGTCTGATTTATGAGA  987

seq1  TGGCCAATACATTTCTACAATCAACACATTAATTCATCCATGATGATTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAATACATTTCTACAATCAACACATTAATTCATCCATGATGATTTT  1037

seq1  GCCTCCACACTTCAAAAGCCTTCCACTAGACTGTGCCTCTCAACACTGCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCACACTTCAAAAGCCTTCCACTAGACTGTGCCTCTCAACACTGCT  1087

seq1  GAGCCGAGGGGCATCACACCATGGCTTTGGGTGGAGATAAACTGTATTCA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGAGGGGCATCACACCATGGCTTTGGGTGGAGATAAACTGTATTCA  1137

seq1  AGCCACAGAATTC  1157
      |||||||||||||
seq2  AGCCACAGAATTC  1150


seq1: chr10_16034149_16035246
seq2: B6Ng01-269F10.g_67_1159

seq1  GAATTCTTTCAGAGTGTGAAATATCAGAAGAAGAAGTCCACTCAGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGAGTGTGAAATATCAGAAGAAGAAGTCCACTCAGAAAAA  50

seq1  AATGAAGAAGGAAGATGTGGGCAGGGATTCTGTGAGGGAGGGTACTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAGGAAGATGTGGGCAGGGATTCTGTGAGGGAGGGTACTGAGA  100

seq1  AGGGGGAAGCATTTTGGATATAAACACACAAACAAACAAATACATAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAGCATTTTGGATATAAACACACAAACAAACAAATACATAAATG  150

seq1  AAAAAGAAAAAATCATTCCAACTTGATCATCATTATTATTTATTAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAATCATTCCAACTTGATCATCATTATTATTTATTAGTATT  200

seq1  ATTATCATTTTACTAATATTAACACATTTAATAAGTAATTAATCTCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATTTTACTAATATTAACACATTTAATAAGTAATTAATCTCAAAT  250

seq1  AAGGAAACAAAAAGAGTGCAATTAAATCTTCCTTAGGATACAGTTCTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACAAAAAGAGTGCAATTAAATCTTCCTTAGGATACAGTTCTAAC  300

seq1  ATTCACACACACTTGACTCCACAGATGAGAGTTTCAATAATCTCCTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACACACTTGACTCCACAGATGAGAGTTTCAATAATCTCCTTGGA  350

seq1  GTCTAGGCCAATCATTCACCCAGCATAAGAAGTATCTCCTTTTCACTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGCCAATCATTCACCCAGCATAAGAAGTATCTCCTTTTCACTTCA  400

seq1  AAAGTTATGAAGAACCCAAAGATTTTATTAGTATTTTTCCCTAATGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATGAAGAACCCAAAGATTTTATTAGTATTTTTCCCTAATGGAGC  450

seq1  TTTCCTTCTCTCTCCTGATGAAAACTTTTCTTGCTTTTGAAATGAGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTCTCTCCTGATGAAAACTTTTCTTGCTTTTGAAATGAGGATC  500

seq1  TGTGCCAACAGAGAAGTCCATGAAAGAATAGCAAACGCAAAGTGTAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAACAGAGAAGTCCATGAAAGAATAGCAAACGCAAAGTGTAAAAG  550

seq1  TGGATTTCTGAAAGTGACTGCCCTCAGAAGAGCCCAATGAAGTTGCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCTGAAAGTGACTGCCCTCAGAAGAGCCCAATGAAGTTGCTCTC  600

seq1  ATAAATCCTATTTACTGGGCTTTTACTACCCATGAAAATGAAAAATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCTATTTACTGGGCTTTTACTACCCATGAAAATGAAAAATAAAA  650

seq1  AGGAATCAAATGCATACCTGCTGCACTTTCCTCAGGAATAAATTTTAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCAAATGCATACCTGCTGCACTTTCCTCAGGAATAAATTTTAGCC  700

seq1  ATAACAACAGGGTGATATTGTATATCAACTATATAATATTTCATATTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACAGGGTGATATTGTATATCAACTATATAATATTTCATATTTAA  750

seq1  ATACTGTGATTATATTGCAAGCATTTCTGTACAATAATCATAAATGATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTGATTATATTGCAAGCATTTCTGTACAATAATCATAAATGATTC  800

seq1  ATATAGATCCTAAGACTACACTCCACCCAATCTATTTGCTCACTATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATCCTAAGACTACACTCCACCCAATCTATTTGCTCACTATTTCC  850

seq1  AATTGTTCAAGAACTTTAAATGATGATATTTTTAATAAATTTTATTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCAAGAACTTTAAATGATGATATTTTTAATAAATTTTATTAAGA  900

seq1  TTTAGTTTTTGCCTTCTAGAATTTCTGCATTACGTTCATCTTTATCTGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTTGCCTTCTAGAATTTCTGCATTACGTTCATCTTTATCTGAC  950

seq1  CTTTATTATATCTATTCTGGGAATATTA-TTTTTCAAGCATTGAAGATTA  999
      | ||||||||||||||||||  |||||| |||||||||||||||||||||
seq2  C-TTATTATATCTATTCTGG--ATATTATTTTTTCAAGCATTGAAGATTA  997

seq1  GACATATTCA-TTTGTGATAATAAATATGGTATAGATATCCAGGAGTAAA  1048
      |||||||||| ||||||||||||||||||||||||||||||| |||| ||
seq2  GACATATTCATTTTGTGATAATAAATATGGTATAGATATCCA-GAGT-AA  1045

seq1  AAATGTAAAATCATGCTCACAATGATGGATATACTAATGATATTAGTAAA  1098
      |||||| |||||||||||||| |||| |||||||||||||||||||||||
seq2  AAATGT-AAATCATGCTCACATTGAT-GATATACTAATGATATTAGTAAA  1093


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