BAC Information

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BAC

Clone NameB6Ng01-269I09
Chromosome10 (Build37)
Map Location 11,887,402 - 11,888,563
singlet/doubletsinglet
Overlap genenone
Upstream geneShprh, Fbxo30, Epm2a, EG666732, LOC100039343
Downstream geneUtrn, LOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269I09.bB6Ng01-269I09.g
ACCGA072099GA072100
length1,1861,155
definitionB6Ng01-269I09.b B6Ng01-269I09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcagttgagaactctttgtttagctctgtaccccatttttaat
ggggttatttgaatttctggagtccagcttcttcagctctttgtacatat
tggatattggtcctctatcagatttaggattggtaaaaaatcctttccca
atctgttggtggcctttttgtcttattgacaatgtcttttgccttacaga
agctttgcaattttatgaggtcccatttgtcaattcttggtcttacagga
caagccattgctgttcagtttaggaatttttcccctgtgcccatatcttt
gagaattttccccactttctcctctactaatttcagtgtctctggtttta
tatggaggtctttgatccaattagagttgagctttgtacaaggagataag
aatgcatcaattcgaattcttctacatgataaccaccagttgtgccagca
ccatttgttgaaaatgctgtcttttttccactggatggttttagcttcct
tgtcaaagatcaagtgaccataagagtgtggattcatttctgcgtcttca
gttctattccattggtctacttgtctgtcgctctaccagtaccatgcaat
ttttatcacaatttctctgtagtaaagctttaggtcaggcatcgtgattc
caccacaggttcttttattgttaagaatagtttttgctattctaggtttt
tattattccagatgaatttgcaaattgccctttctaactcagtgaagaat
tgagttgaaattttgatggggattgcattgaatctgtaggttgcttttgg
caggatagccatttttactatattgatcctgccaatccatgagcttggga
gatctttccatcatctgagatcttcttcaacttctttcttcagagacttg
aagttcttatcatacagacctttcacttccttagttagagtcacaccaag
atatttatatatttgtgactatgtgaaggtgttgttccctaatttttttt
ctcagtcaattatcctttgtgtagagaaaggtatcatttgttggacttat
tttataatcagctactcactggaagctgtttatcaggtttaagagtccta
ttggaaattttggatccaatactacgatcactcgtataggaatttgactc
tctcattgaattcactgaattccccttctgcatgca
gaattcttggatgcaagccatgtccatacgttgctgacttgccacctcct
ccccattcttggtcatttacattttctttgcccctttctccatgtttcct
gagctgtagagggctctacatacacattctgtttatggcttagcactcca
cactcatgtaatctttgaaatttgaccagttggaagtcttcaacaggcta
taaagaggaatctaatatttgtcaaaatttaatataatttaatcacacta
taataataataataataataataataataataaataaagataaaatcctt
agagtatgtattattttatatactgtatatgctaggtgatgcttcaaaga
ttccttccttaggaatgttattctcaatgttagaaagtcttcttgaagtt
cccaaagttagtttcccagggactttctacattggtgattttccccttag
cttgaccttactccagagatccctaaagtcagataaatccttctttggga
tggatttagaaaagaagtcctcttagtgactctgtcaagagtcctttgta
caaccttgaccccaagaaatcttccaaattcatgacctgtacattcatct
ctgtttcaaagtcttctttgcaaaggatccagacattagtattgggctca
gggtctaagaaagcagatggtgatgtggaaccatagaactgaatcaactc
atgattagttggaactgttaaattgtgagacataatagttcttggcacta
acaaatgcagttatttaaatactgactgccagtgtgtgctagggtggtac
attgatgaattttaatagtactgtcagtgccaatatagaaatataagtac
aatggagatgggcatgaattagtaagattgtactctagaaacaaaagaac
atataagactatgctgttgttttcagacagttttcttttttgtaggcctg
gctgtcctggaaactcattttgtagatcaggtggcctcaaacctcagaaa
tctgcctgtctctgcctcccaaggtgtgggggattaaaaggtgagccacc
actgcccagtggtaataagactatggtatgggaaatgaatccattgcaag
acagagactcaccaggtatcatgatatagcctttattcattcaggttgaa
tggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_11887402_11888563
seq2: B6Ng01-269I09.g_67_1221 (reverse)

seq1  GGCCATTCACACTGAATGAAATAAAAGCCTAATTACATGATA-CTGGTGA  49
      |||||||||  ||||||| |||||| ||   ||  ||||||| |||||| 
seq2  GGCCATTCAACCTGAATG-AATAAAGGC--TATATCATGATACCTGGTG-  46

seq1  AGTCCTCTGGTCTTTCCAATTGATTTCATTTCCAATTAACCATAGTCTTA  99
      ||| |||| ||| || |||| || ||||||||| ||  ||||||||||| 
seq2  AGT-CTCT-GTC-TTGCAATGGA-TTCATTTCCCAT--ACCATAGTCTT-  89

seq1  ATTTCCACTGGGCAGTGGTGGCTCACCCTTTTAAT-CCCCACA-CTTGGG  147
      ||| ||||||||||||||||||||| ||||||||| ||||||| ||||||
seq2  ATTACCACTGGGCAGTGGTGGCTCA-CCTTTTAATCCCCCACACCTTGGG  138

seq1  AGGCAGAGACAGGCAGATTTCTGA-GTTTGAGGCCACCCTGATCTACAAA  196
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  AGGCAGAGACAGGCAGATTTCTGAGGTTTGAGGCCA-CCTGATCTACAAA  187

seq1  ATGAG-TTCCAGGACAGCCAGGCCTACAAAAA--GAAACTGTCTTGAAAA  243
      ||||| ||||||||||||||||||||||||||   |||||||| ||||||
seq2  ATGAGTTTCCAGGACAGCCAGGCCTACAAAAAAGAAAACTGTC-TGAAAA  236

seq1  CAACAGCATAGTCTTATATGTTCTTTTGTTTCTAGAGTACAATCTTACTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCATAGTCTTATATGTTCTTTTGTTTCTAGAGTACAATCTTACTA  286

seq1  ATTCATGCCCATCTCCATTGTACTTATATTTCTATATTGGCACTGACAGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCCCATCTCCATTGTACTTATATTTCTATATTGGCACTGACAGT  336

seq1  ACTATTAAAATTCATCAATGTACCACCCTAGCACACACTGGCAGTCAGTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAAATTCATCAATGTACCACCCTAGCACACACTGGCAGTCAGTA  386

seq1  TTTAAATAACTGCATTTGTTAGTGCCAAGAACTATTATGTCTCACAATTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAACTGCATTTGTTAGTGCCAAGAACTATTATGTCTCACAATTT  436

seq1  AACAGTTCCAACTAATCATGAGTTGATTCAGTTCTATGGTTCCACATCAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCCAACTAATCATGAGTTGATTCAGTTCTATGGTTCCACATCAC  486

seq1  CATCTGCTTTCTTAGACCCTGAGCCCAATACTAATGTCTGGATCCTTTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTTTCTTAGACCCTGAGCCCAATACTAATGTCTGGATCCTTTGC  536

seq1  AAAGAAGACTTTGAAACAGAGATGAATGTACAGGTCATGAATTTGGAAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGACTTTGAAACAGAGATGAATGTACAGGTCATGAATTTGGAAGA  586

seq1  TTTCTTGGGGTCAAGGTTGTACAAAGGACTCTTGACAGAGTCACTAAGAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGGGTCAAGGTTGTACAAAGGACTCTTGACAGAGTCACTAAGAG  636

seq1  GACTTCTTTTCTAAATCCATCCCAAAGAAGGATTTATCTGACTTTAGGGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTTTCTAAATCCATCCCAAAGAAGGATTTATCTGACTTTAGGGA  686

seq1  TCTCTGGAGTAAGGTCAAGCTAAGGGGAAAATCACCAATGTAGAAAGTCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAGTAAGGTCAAGCTAAGGGGAAAATCACCAATGTAGAAAGTCC  736

seq1  CTGGGAAACTAACTTTGGGAACTTCAAGAAGACTTTCTAACATTGAGAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAACTAACTTTGGGAACTTCAAGAAGACTTTCTAACATTGAGAAT  786

seq1  AACATTCCTAAGGAAGGAATCTTTGAAGCATCACCTAGCATATACAGTAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCTAAGGAAGGAATCTTTGAAGCATCACCTAGCATATACAGTAT  836

seq1  ATAAAATAATACATACTCTAAGGATTTTATCTTTATTTATTATTATTATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAATACATACTCTAAGGATTTTATCTTTATTTATTATTATTATT  886

seq1  ATTATTATTATTATTATTATAGTGTGATTAAATTATATTAAATTTTGACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATAGTGTGATTAAATTATATTAAATTTTGACA  936

seq1  AATATTAGATTCCTCTTTATAGCCTGTTGAAGACTTCCAACTGGTCAAAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGATTCCTCTTTATAGCCTGTTGAAGACTTCCAACTGGTCAAAT  986

seq1  TTCAAAGATTACATGAGTGTGGAGTGCTAAGCCATAAACAGAATGTGTAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGATTACATGAGTGTGGAGTGCTAAGCCATAAACAGAATGTGTAT  1036

seq1  GTAGAGCCCTCTACAGCTCAGGAAACATGGAGAAAGGGGCAAAGAAAATG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCCCTCTACAGCTCAGGAAACATGGAGAAAGGGGCAAAGAAAATG  1086

seq1  TAAATGACCAAGAATGGGGAGGAGGTGGCAAGTCAGCAACGTATGGACAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGACCAAGAATGGGGAGGAGGTGGCAAGTCAGCAACGTATGGACAT  1136

seq1  GGCTTGCATCCAAGAATTC  1162
      |||||||||||||||||||
seq2  GGCTTGCATCCAAGAATTC  1155