BAC Information

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BAC

Clone NameB6Ng01-269O06
Chromosome10 (Build37)
Map Location 123,030,301 - 123,031,419
singlet/doubletsinglet
Overlap geneAI851790
Upstream genePpm1h, D630033A02Rik, Mon2, Usp15, LOC100042958
Downstream gene4930503E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269O06.bB6Ng01-269O06.g
ACCGA072371GA072372
length1,1301,198
definitionB6Ng01-269O06.b B6Ng01-269O06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaccactccaggctactccccatgatcctgtttcgaacaaca
acttcaattacaaccacaccatcaccaacgacaactacagcaaacatctt
aacataatttatattaatagaaccttcagtgtgagaaattcattgttctg
ggattacatatgtcaaggtatcatgaaaggcgattgccctgcaattatag
aagaacggtgattctatgttcttaatcatgtgttgcttttctgttgcagg
atgaataagagatccttgcagaaagcagcacaaggaaagcttctgataat
tattttgatagggaccttgtgggggaaagccgtttccagcgccaaccatc
acaaaggtaaatcccctgccttctgtgctgtctgtgtgcggcagctcctt
taaacaaattgtcacattctgtcttcactggtctgttcaattttattagg
tatgggttccccttagcaattttctttaagtaaaaatgcacagagctgtc
ttcaggataactttaatagcggaaacatggtgtttccatgattactgcca
attctgaaaatattgtccaatgaatgcaaaattctaactctgtcttttct
ccattataaagacagaaaagtcaaaatgccaagttgatgtgtaaaaagat
gaattgtagacctgccgtatcatcataaaaaaaacagctttcatatgctt
gtgctactcatgtgtatacagtatatgtaaagttttcatttagagagtgt
tgtttatatgttagtttgtcgaccatctctttctggcaacatgcctcttc
tgcgcacctttggacaccacttctaccatgatcctcagaaagatctgttc
tacgactgaaaagagtgagaatatttgtccatatgtatgcgctgtcaact
cagaaattactcccctttctcctttccagccattagactcagcataatga
atggctgccttttcccaatgaattgaaaatgggggctatcttctgcgata
tgcctaccacgatccacgtattcacaatccagagaagtcacttagatctt
ttctgtgaaaaatggttttgctatcaactctcttgtccacccggtacagg
ctagccaattttcatttcgttattctgttt
gaattcctgaagggaaaagggagtgctttcaataactggtattgtgacac
ctgagaatcaaatctttctgattacaccctttctttaggctaagggggaa
aaacaacacaaaacaaacccaaggcttaaatgcaggtcctggaaatgcaa
aactcttagagtaaaatgtaggaggaggatgtctatggcgttggtctgag
cactgcttggttttgagatataacttcaaaagcacagaccacaaaagtaa
agataaagtgatagattaggacaaatttaaaaaaaaaaaaaaacacatgc
caaaagaactcataagagaaaaagcccattggttagactaatactacata
aaaggtgatagtaataaatttaaaaggctgctaataacaaatacctaata
tacaaaatatgcaaggagcccaaacagctcaaaagcaagaagtcaaccta
attttaaaatagaccagataataaagatttatcaagaaagggtgtggtaa
tactaaatatccttaattactagtgtgatataagtcagaaccaaaatgta
gaacagttactatcaaaagcaagtgatgaaagacattggtataaagcaga
aagaacatgtttgtttactgtcaactattgtaaattgttccacccagtat
taacagtatgatgaaacttcagaaccaaaaactatcgtatgatctaagaa
tcccaatataactatacattcaaaaagaatgaagtccgtatgctgaagaa
aattctgtgcttttaagttcataatagctttcttgacactggccaaggaa
tgaaatcaatcttagtatcagtgggtgaacagataaggaaaatatttggt
acatatacataaaaggatatgtccttttattttaaaaaaataaatgtaat
cctgccaacatttttactacatttgatgaaactctagaatattgcatctt
taccggaaggaagccagtcacaaaaacatagattattaatatttattttc
attatatgtataatatgaaaaagtttaacctccagagtctgaggatatat
agtacccacaaataaaactggaacaacaagtacttgtttgtcaaggatta
aaaattcaagttagaggatgagctccaaagccatcgttctgcaacgttgg
atcctaactattgtatcacaacagcctttaaatggttcctataaccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123030301_123031419
seq2: B6Ng01-269O06.b_45_1174

seq1  GAATTCAAAACCAGTCCAGGCTACACAGTAAGATCCTGTTTCGAACAACA  50
      |||||| |||||| |||||||||| |   | |||||||||||||||||||
seq2  GAATTCTAAACCACTCCAGGCTACTCCCCATGATCCTGTTTCGAACAACA  50

seq1  ACAGCAATAACAACCACACAATCACCAACAACAACTACAGCAAACATAGT  100
      ||  |||| |||||||||| ||||||||| |||||||||||||||||  |
seq2  ACTTCAATTACAACCACACCATCACCAACGACAACTACAGCAAACATCTT  100

seq1  AACATAATTTATATAAATAGAACCTTCAGTGTGAGAAATTCAGTGTTCTG  150
      |||||||||||||| ||||||||||||||||||||||||||| |||||||
seq2  AACATAATTTATATTAATAGAACCTTCAGTGTGAGAAATTCATTGTTCTG  150

seq1  GGATTACATATGTCAAGGTATCATGAAAGGCGATTGTAGTACAATTAGAG  200
      ||||||||||||||||||||||||||||||||||||   | |||||| ||
seq2  GGATTACATATGTCAAGGTATCATGAAAGGCGATTGCCCTGCAATTATAG  200

seq1  AAGCACAATGATTCTATGTTCTTAGTCATGTGTTGCTTTTCTGTTGCAGG  250
      ||| ||  |||||||||||||||| |||||||||||||||||||||||||
seq2  AAGAACGGTGATTCTATGTTCTTAATCATGTGTTGCTTTTCTGTTGCAGG  250

seq1  ATGAATAAGAGATACTTGCAGAAAGCAACACAAGGAAAGCTTCTGATAAT  300
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  ATGAATAAGAGATCCTTGCAGAAAGCAGCACAAGGAAAGCTTCTGATAAT  300

seq1  TATTTTTATAGTGACCTTGTGGGGGAAAGCCGTTTCCAGCGCCAACCATC  350
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGATAGGGACCTTGTGGGGGAAAGCCGTTTCCAGCGCCAACCATC  350

seq1  ACAAAGGTAAGTCCCCTGCCTTCTGTGCTGTCTGTGTGCGGCAGCTCCTT  400
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTAAATCCCCTGCCTTCTGTGCTGTCTGTGTGCGGCAGCTCCTT  400

seq1  TAAACAGATTGTCACATTCTGTCTTCACTGGTCTGTTCAATTTTATTAGG  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAATTGTCACATTCTGTCTTCACTGGTCTGTTCAATTTTATTAGG  450

seq1  TATGGGTTCCCCTTAGCAATTTTCTTTAAGTAAAAATGCAGAGAGCTGTC  500
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATGGGTTCCCCTTAGCAATTTTCTTTAAGTAAAAATGCACAGAGCTGTC  500

seq1  TTCAGGATAACTTTGAGAGCGGAAACATGGTGTTTCCATGATTACTGCCA  550
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  TTCAGGATAACTTTAATAGCGGAAACATGGTGTTTCCATGATTACTGCCA  550

seq1  ATTCTGAAAATATTGTCCAATGAATGCAAAATTCTAACTCTGTCTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAAATATTGTCCAATGAATGCAAAATTCTAACTCTGTCTTTTCT  600

seq1  CCATTTTAAAGACAGTAATGTTAAAATGTCAAGTTGATGTGTAAAAAGAT  650
      ||||| ||||||||| || || |||||| |||||||||||||||||||||
seq2  CCATTATAAAGACAGAAAAGTCAAAATGCCAAGTTGATGTGTAAAAAGAT  650

seq1  GAATTTTAGACTTCCCTTATCTTCATAAAGAAAACAGTTTTCATATGCAT  700
      ||||| ||||| | || |||| ||||||| ||||||| |||||||||| |
seq2  GAATTGTAGACCTGCCGTATCATCATAAAAAAAACAGCTTTCATATGCTT  700

seq1  GTCCTAATCATGTGTATACAGTATATGTAAAGTTTTCTTTTAGAGGGTTT  750
      || ||| |||||||||||||||||||||||||||||| ||||||| || |
seq2  GTGCTACTCATGTGTATACAGTATATGTAAAGTTTTCATTTAGAGAGTGT  750

seq1  TGTTTATTTGTTTGTTTGTAGACCATCTCTTTCTGGCAGCATGCCTC-TC  799
      ||||||| |||| |||||| |||||||||||||||||| |||||||| ||
seq2  TGTTTATATGTTAGTTTGTCGACCATCTCTTTCTGGCAACATGCCTCTTC  800

seq1  TGCCCACCATTTGGACACCACTTCTACCATGATCCTCAGAAAGTTCTGTT  849
      ||| |||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TGCGCACC-TTTGGACACCACTTCTACCATGATCCTCAGAAAGATCTGTT  849

seq1  CTACAACAGAAAAGAGTGAGAATATTTGTCCATATGTATGCGCTGTCAGC  899
      |||| || |||||||||||||||||||||||||||||||||||||||| |
seq2  CTACGACTGAAAAGAGTGAGAATATTTGTCCATATGTATGCGCTGTCAAC  899

seq1  TC-GGAATTACTCCCCTTTCTCCTTTCCAGCCATTAGACTCAGCATAATG  948
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTACTCCCCTTTCTCCTTTCCAGCCATTAGACTCAGCATAATG  949

seq1  AATGGCTGCCTTTTCCAAATGAGTTGAAA--TGGGGCTAT-TTCTGCATT  995
      |||||||||||||||| ||||| ||||||   |||||||| ||||||  |
seq2  AATGGCTGCCTTTTCCCAATGAATTGAAAATGGGGGCTATCTTCTGCGAT  999

seq1  ATGCCTACCACAAT-CAAGTATTCACAA-CCAGAGAAGTCAATTTAGAT-  1042
      ||||||||||| || || |||||||||| ||||||||||| | |||||| 
seq2  ATGCCTACCACGATCCACGTATTCACAATCCAGAGAAGTC-ACTTAGATC  1048

seq1  TTTTCTGTGAAATATGGTTTTGCTATTCAATTCTC-TGTCCACC--GTAA  1089
      |||||||||||| |||||||||||| |||| |||| ||||||||  ||| 
seq2  TTTTCTGTGAAAAATGGTTTTGCTA-TCAACTCTCTTGTCCACCCGGTAC  1097

seq1  AGGCTAGC--AATTTCCTTTC-TTATTCTGTTT  1119
      ||||||||  | |||| |||| |||||||||||
seq2  AGGCTAGCCAATTTTCATTTCGTTATTCTGTTT  1130