BAC Information

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BAC

Clone NameB6Ng01-270J24
Chromosome10 (Build37)
Map Location 121,324,166 - 121,513,680
singlet/doubletdoublet
Overlap geneSrgap1, EG216394
Upstream geneLOC100043488, Lemd3, Wif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403
Downstream geneLOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h, D630033A02Rik, Mon2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270J24.bB6Ng01-270J24.g
ACCGA072917GA072918
length9491,089
definitionB6Ng01-270J24.b B6Ng01-270J24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,512,733 - 121,513,680)(121,324,166 - 121,325,251)
sequence
gaattctcaactgaagaataccgaatggttgagaaacacctgaaaaaacg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagttgacagc
agatgctggcgaagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagctggtataaccactgtggaaatcagtctggcgcttcctca
gaaaattggacatatggataaagaatgttaatgttttttaacccaaaata
attgttttgagttcccatgcttttgctatgactaaaagatgtgagtctac
tctcagagcacacatctctttttgtaactagaatgtgttaatagaactca
tataagcttcagggagttgcggcttggatccacctgtcacaggccaaatg
gactccagataagtactctcgtcaagtcagttaacagattaaggtccctg
cctgttgcctgttcctgagggggagctccaaatggtcgattttcatttaa
ggttcttacctttaacttccatcccagtttatatctgtccttacagattc
ctattcaggtgacaggtaccatgcaggaatcagcctcagactacaaaact
gctctaaaagcaatctacaaatttaccagccccaggtagtcttacaaaac
tggagagcctggacttgtaagaactgatataagcgaataatccagttgac
atgatcgctccctgtctcttcatctaggtcaggaaaccagatggttctga
tgaaaaccccattgcctggatcccctctcagactttcactaacagttaaa
gggccctgcaacaacatcctaattttacctgaggagcagttacagaagag
agtatttggcccttgtcttcaacaataggctggggggggtggggggggg
gaattcaagccctgcggtggttcacttccaacctggccatgaactagctc
tgggactctgcttcctaaaggaggggattaaagggatttctagacaccaa
tttagtactaaaattctaccagcctgtgggcatgttaaatccagactatc
acacgaggtagaaaccacgtgaatttaggtaggttgaaatggctcgccaa
attcgattgacttagatcctgctctcctttatatgatttattttctttct
acagagaatcatttctagtcccattttgagatgagtaattgaggaacagt
gtttattctatgttctggttagtactatgtctatctagtattatattatg
ccatatataagtttgatgaatgatacaatagtaaacaaaaccccacggct
tagttacccaataaaaataaacccaattaagatgcctgtcagtagcagag
tctaatcacttagaagccacaattctgtattccagaatacaacactttgg
gtaaaacactttgtggtttcctaacatgctcagtatgaaacactcttcag
tattaaaaaaaatattttggtaaaatatgcacgttatttttcattttcaa
accaaataatttcggggaaataagttcatattgttcacttagacagccat
atttgtgtctgtgtatttgtggtatagaagcaccagccagaagtgatttt
caaatctccttaataaaatgaagactcttcgcagaaactaaggggcactg
ggcatcattaactagtgcagtgccctaaaatatgtccccgtaaaattgtc
aaaatagctgtcgtcacagagccacgaaatgtttactttataagctgcag
tcactggggtattaacaccaagcccggtcagatttgctaaccttccctgc
aagtcagttctaggcctactgaccaggaacctcatgcttacctgcacctt
gaccaggagcctcacgctacctgcacctgatcaggagccttcaccgataa
cctgcaacctttctgttcattcaagtagctggcagtcaagtcaggcagac
atatgggaaacagttcgtgtcatgattctctttagtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_121512733_121513680
seq2: B6Ng01-270J24.b_47_994 (reverse)

seq1  CCCCCCCCA-CCCCCCCAGCCTATTGTTGAAGACAAGGGCCAAATACTCT  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCACCCCCCCCAGCCTATTGTTGAAGACAAGGGCCAAATACTCT  50

seq1  CTTCTGTAACTGCTCCTCAGGTAAAATTAGGATGTTGTTTGCAGGGCCCT  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTCTGTAACTGCTCCTCAGGTAAAATTAGGATGTTG-TTGCAGGGCCCT  99

seq1  TTAACTGTTAGTGAAAGTCTGAGAGGGGATCCAGGCAATGGGGTTTTCAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTTAGTGAAAGTCTGAGAGGGGATCCAGGCAATGGGGTTTTCAT  149

seq1  CAGAACCATCTGGTTTCCTGACCTAGATGAAGAGACAGGGAGCGATCATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCATCTGGTTTCCTGACCTAGATGAAGAGACAGGGAGCGATCATG  199

seq1  TCAACTGGATTATTCGCTTATATCAGTTCTTACAAGTCCAGGCTCTCCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGATTATTCGCTTATATCAGTTCTTACAAGTCCAGGCTCTCCAG  249

seq1  TTTTGTAAGACTACCTGGGGCTGGTAAATTTGTAGATTGCTTTTAGAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAGACTACCTGGGGCTGGTAAATTTGTAGATTGCTTTTAGAGCA  299

seq1  GTTTTGTAGTCTGAGGCTGATTCCTGCATGGTACCTGTCACCTGAATAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAGTCTGAGGCTGATTCCTGCATGGTACCTGTCACCTGAATAGG  349

seq1  AATCTGTAAGGACAGATATAAACTGGGATGGAAGTTAAAGGTAAGAACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTAAGGACAGATATAAACTGGGATGGAAGTTAAAGGTAAGAACCT  399

seq1  TAAATGAAAATCGACCATTTGGAGCTCCCCCTCAGGAACAGGCAACAGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAAATCGACCATTTGGAGCTCCCCCTCAGGAACAGGCAACAGGC  449

seq1  AGGGACCTTAATCTGTTAACTGACTTGACGAGAGTACTTATCTGGAGTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCTTAATCTGTTAACTGACTTGACGAGAGTACTTATCTGGAGTCC  499

seq1  ATTTGGCCTGTGACAGGTGGATCCAAGCCGCAACTCCCTGAAGCTTATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCCTGTGACAGGTGGATCCAAGCCGCAACTCCCTGAAGCTTATAT  549

seq1  GAGTTCTATTAACACATTCTAGTTACAAAAAGAGATGTGTGCTCTGAGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTATTAACACATTCTAGTTACAAAAAGAGATGTGTGCTCTGAGAG  599

seq1  TAGACTCACATCTTTTAGTCATAGCAAAAGCATGGGAACTCAAAACAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCACATCTTTTAGTCATAGCAAAAGCATGGGAACTCAAAACAATT  649

seq1  ATTTTGGGTTAAAAAACATTAACATTCTTTATCCATATGTCCAATTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGTTAAAAAACATTAACATTCTTTATCCATATGTCCAATTTTCT  699

seq1  GAGGAAGCGCCAGACTGATTTCCACAGTGGTTATACCAGCTTGCAATCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCGCCAGACTGATTTCCACAGTGGTTATACCAGCTTGCAATCCC  749

seq1  ACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCTTCGCCAGCATCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCTTCGCCAGCATCTG  799

seq1  CTGTCAACTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAACTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAA  849

seq1  TCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAAC  899

seq1  GTTTTTTCAGGTGTTTCTCAACCATTCGGTATTCTTCAGTTGAGAATTC  948
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCAGGTGTTTCTCAACCATTCGGTATTCTTCAGTTGAGAATTC  948

seq1: chr10_121324166_121325251
seq2: B6Ng01-270J24.g_67_1155

seq1  GAATTCAAGCCCTGCGGTGGTTCACTTCCAACCTGGCCATGAACTAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCCTGCGGTGGTTCACTTCCAACCTGGCCATGAACTAGCTC  50

seq1  TGGGACTCTGCTTCCTAAAGGAGGGGATTAAAGGGATTTCTAGACACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCTGCTTCCTAAAGGAGGGGATTAAAGGGATTTCTAGACACCAA  100

seq1  TTTAGTACTAAAATTCTACCAGCCTGTGGGCATGTTAAATCCAGACTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTACTAAAATTCTACCAGCCTGTGGGCATGTTAAATCCAGACTATC  150

seq1  ACACGAGGTAGAAACCACGTGAATTTAGGTAGGTTGAAATGGCTCGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGGTAGAAACCACGTGAATTTAGGTAGGTTGAAATGGCTCGCCAA  200

seq1  ATTCGATTGACTTAGATCCTGCTCTCCTTTATATGATTTATTTTCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGATTGACTTAGATCCTGCTCTCCTTTATATGATTTATTTTCTTTCT  250

seq1  ACAGAGAATCATTTCTAGTCCCATTTTGAGATGAGTAATTGAGGAACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAATCATTTCTAGTCCCATTTTGAGATGAGTAATTGAGGAACAGT  300

seq1  GTTTATTCTATGTTCTGGTTAGTACTATGTCTATCTAGTATTATATTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTATGTTCTGGTTAGTACTATGTCTATCTAGTATTATATTATG  350

seq1  CCATATATAAGTTTGATGAATGATACAATAGTAAACAAAACCCCACGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATAAGTTTGATGAATGATACAATAGTAAACAAAACCCCACGGCT  400

seq1  TAGTTACCCAATAAAAATAAACCCAATTAAGATGCCTGTCAGTAGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACCCAATAAAAATAAACCCAATTAAGATGCCTGTCAGTAGCAGAG  450

seq1  TCTAATCACTTAGAAGCCACAATTCTGTATTCCAGAATACAACACTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCACTTAGAAGCCACAATTCTGTATTCCAGAATACAACACTTTGG  500

seq1  GTAAAACACTTTGTGGTTTCCTAACATGCTCAGTATGAAACACTCTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACACTTTGTGGTTTCCTAACATGCTCAGTATGAAACACTCTTCAG  550

seq1  TATTAAAAAAAATATTTTGGTAAAATATGCACGTTATTTTTCATTTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAAAAATATTTTGGTAAAATATGCACGTTATTTTTCATTTTCAA  600

seq1  ACCAAATAATTTCGGGGAAATAAGTTCATATTGTTCACTTAGACAGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATAATTTCGGGGAAATAAGTTCATATTGTTCACTTAGACAGCCAT  650

seq1  ATTTGTGTCTGTGTATTTGTGGTATAGAAGCACCAGCCAGAAGTGATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTCTGTGTATTTGTGGTATAGAAGCACCAGCCAGAAGTGATTTT  700

seq1  CAAATCTCCTTAATAAAATGAAGACTCTTCGCAGAAACTAAGGGGCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTCCTTAATAAAATGAAGACTCTTCGCAGAAACTAAGGGGCACTG  750

seq1  GGCATCATTAACTAGTGCAGTGCCCTAAAATATGTCCCCGTAAAATTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCATTAACTAGTGCAGTGCCCTAAAATATGTCCCCGTAAAATTGTC  800

seq1  -AAATAGCTGTCGTCACAGAGCCACGAAATGTTAACTTTATAAGCTGCAG  849
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAATAGCTGTCGTCACAGAGCCACGAAATGTTTACTTTATAAGCTGCAG  850

seq1  TCACTGGGGTATTAACACCAAG-CCGGTCAGATTTGCTAACCTTCCCTGC  898
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCACTGGGGTATTAACACCAAGCCCGGTCAGATTTGCTAACCTTCCCTGC  900

seq1  AAGTCAGTTCTAGGGCTACTGACCAGGAACCTCATGC-TACCTGCACC-T  946
      |||||||||||||| |||||||||||||||||||||| |||||||||| |
seq2  AAGTCAGTTCTAGGCCTACTGACCAGGAACCTCATGCTTACCTGCACCTT  950

seq1  GACCAGGAGCCTCACGCTACCTGCACCTGACCAGGAGCC-TCA-CGAT-A  993
      |||||||||||||||||||||||||||||| |||||||| ||| |||| |
seq2  GACCAGGAGCCTCACGCTACCTGCACCTGATCAGGAGCCTTCACCGATAA  1000

seq1  CCTGC-ACCTTTCTGTTTCCATTCAAGTAGCTGGCAGCCAAAGCCAGGGG  1042
      ||||| |||||||||||  |||||||||||||||||| | ||| ||  ||
seq2  CCTGCAACCTTTCTGTT--CATTCAAGTAGCTGGCAGTC-AAGTCA--GG  1045

seq1  CAGACATAATGGAAACAGTTCGTGGTCCATGA-TCTC-TTAGTAGA  1086
      ||||||||  ||||||||||||||   ||||| |||| ||||||||
seq2  CAGACATATGGGAAACAGTTCGTG--TCATGATTCTCTTTAGTAGA  1089