BAC Information

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BAC

Clone NameB6Ng01-270L08
Chromosome10 (Build37)
Map Location 105,184,056 - 105,185,160
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042383, Tmtc2, EG627573
Downstream geneBC067068, Ccdc59, EG667758, EG639162, Ppfia2, Olfr1556-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270L08.b
ACCGA072979
length1,101
definitionB6Ng01-270L08.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataccttacaatctgcttgccccaagacaagcaaattcccaag
tataccagcctttgttatgtaaactttcaaactattggttaatttaaaaa
tggctgcagccaattactggcgagaatgggggaggcagtgtttgagtgac
tagctggcagtgttgcaggtaagaaccttgaagagaggaaagaggaaaac
aaggggagagaaaaggagggtgaaggaggaaggagacagagaaatcaaga
ggtcttcattggatgtgtctgagtaaaaggttccccccaggactgactac
tggagcagaaatgacctggaaagactctaaacgtatttgcaaagcacagt
gggaattagcagtctagcaaatagaaatatagattaggggcacccccccc
tagtaattgggctaagctaaactgataaatcatagtctgagtctcactca
tttgaaagctacccacggttaaaaataatttacatatatgcatgcatata
cataaatgtgccaggaaaattatttcaaataccttccactgatgcacaaa
tgatcactcaccgggtatatataggctgctttctatgtgccctatgtaac
taaaaaaaaaaatgtctatcacttaaatatcttaaactgtcttcccatcc
ccaaaaagttacctctaaactagaatatgcaaaaggtatacaattcaact
gaaattctgaaggatcaagaagcctagtggaaatagatagcataataaag
aattaccttactcacttgtataaactaataggtgtcaaaatggccatgtt
gacagcaatagaaaaatgtgtccactttagttatagatttcacagagccc
ctcggaatttccatttattggcctcatacacagctctaaaggtgttatat
aagtccttcctggcaagcaggaacatgtcattttttgacagtttcgaaag
tctcttattctaactgatgtaaaaataaagcatactatacattaacataa
ttccgcaagcaactctctctgaagcaatttctcatgacctaagctgttgg
gaaaaaatagatgtgatggatctttgttcatacatgcatatcattcatgc
a
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105184056_105185160
seq2: B6Ng01-270L08.b_43_1143 (reverse)

seq1  TGCATGAATGATATGCATGTATGGAACAAAGATCCAATCACATCTAATTT  50
      |||||||||||||||||||||| |||||||||||| ||||||||||  ||
seq2  TGCATGAATGATATGCATGTAT-GAACAAAGATCC-ATCACATCTA--TT  46

seq1  TTTTCCAAACAGCTTAGGTCATGAGAAAATTGCTTCAGAGAGAGTTGCTT  100
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTTCCCAACAGCTTAGGTCATGAG-AAATTGCTTCAGAGAGAGTTGCTT  95

seq1  GCGGAATTATGTTAATGTATAGTATGCTTTATTTTTACATCAGTTAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAATTATGTTAATGTATAGTATGCTTTATTTTTACATCAGTTAGAAT  145

seq1  AAGAGACTTTCGAAACTGTCAAAAAATGACATGTTCCTGCTTGCCAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTTTCGAAACTGTCAAAAAATGACATGTTCCTGCTTGCCAGGAA  195

seq1  GGACTTATATAACACC-TTAGAGCTGTGTATGAGGCCAATAAATGGAAAT  249
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGACTTATATAACACCTTTAGAGCTGTGTATGAGGCCAATAAATGGAAAT  245

seq1  TCCGAGGGGCTCTGTGAAATCTATAACTAAAGTGGACACATTTTTCTATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAGGGGCTCTGTGAAATCTATAACTAAAGTGGACACATTTTTCTATT  295

seq1  GCTGTCAACATGGCCATTTTGACACCTATTAGTTTATACAAGTGAGTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAACATGGCCATTTTGACACCTATTAGTTTATACAAGTGAGTAAG  345

seq1  GTAATTCTTTATTATGCTATCTATTTCCACTAGGCTTCTTGATCCTTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTTTATTATGCTATCTATTTCCACTAGGCTTCTTGATCCTTCAG  395

seq1  AATTTCAGTTGAATTGTATACCTTTTGCATATTCTAGTTTAGAGGTAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTTGAATTGTATACCTTTTGCATATTCTAGTTTAGAGGTAACT  445

seq1  TTTTGGGGATGGGAAGACAGTTTAAGATATTTAAGTGATAGACATTTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGATGGGAAGACAGTTTAAGATATTTAAGTGATAGACATTTTTT  495

seq1  TTTTTAGTTACATAGGGCACATAGAAAGCAGCCTATATATACCCGGTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTTACATAGGGCACATAGAAAGCAGCCTATATATACCCGGTGAG  545

seq1  TGATCATTTGTGCATCAGTGGAAGGTATTTGAAATAATTTTCCTGGCACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATTTGTGCATCAGTGGAAGGTATTTGAAATAATTTTCCTGGCACA  595

seq1  TTTATGTATATGCATGCATATATGTAAATTATTTTTAACCGTGGGTAGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATATGCATGCATATATGTAAATTATTTTTAACCGTGGGTAGCT  645

seq1  TTCAAATGAGTGAGACTCAGACTATGATTTATCAGTTTAGCTTAGCCCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGAGTGAGACTCAGACTATGATTTATCAGTTTAGCTTAGCCCAA  695

seq1  TTACTAGGGGGGGGTGCCCCTAATCTATATTTCTATTTGCTAGACTGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGGGGGGGGTGCCCCTAATCTATATTTCTATTTGCTAGACTGCTA  745

seq1  ATTCCCACTGTGCTTTGCAAATACGTTTAGAGTCTTTCCAGGTCATTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCACTGTGCTTTGCAAATACGTTTAGAGTCTTTCCAGGTCATTTCT  795

seq1  GCTCCAGTAGTCAGTCCTGGGGGGAACCTTTTACTCAGACACATCCAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGTAGTCAGTCCTGGGGGGAACCTTTTACTCAGACACATCCAATG  845

seq1  AAGACCTCTTGATTTCTCTGTCTCCTTCCTCCTTCACCCTCCTTTTCTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTCTTGATTTCTCTGTCTCCTTCCTCCTTCACCCTCCTTTTCTCT  895

seq1  CCCCTTGTTTTCCTCTTTCCTCTCTTCAAGGTTCTTACCTGCAACACTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGTTTTCCTCTTTCCTCTCTTCAAGGTTCTTACCTGCAACACTGC  945

seq1  CAGCTAGTCACTCAAACACTGCCTCCCCCATTCTCGCCAGTAATTGGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGTCACTCAAACACTGCCTCCCCCATTCTCGCCAGTAATTGGCTG  995

seq1  CAGCCATTTTTAAATTAACCAATAGTTTGAAAGTTTACATAACAAAGGCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTTTTAAATTAACCAATAGTTTGAAAGTTTACATAACAAAGGCT  1045

seq1  GGTATACTTGGGAATTTGCTTGTCTTGGGGCAAGCAGATTGTAAGGTATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACTTGGGAATTTGCTTGTCTTGGGGCAAGCAGATTGTAAGGTATA  1095

seq1  GAATTC  1105
      ||||||
seq2  GAATTC  1101


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