BAC Information

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BAC

Clone NameB6Ng01-272L15
Chromosome10 (Build37)
Map Location 23,562,050 - 23,720,793
singlet/doubletdoublet
Overlap geneVnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b
Upstream geneEya4, Rps12, 1110021L09Rik
Downstream geneTaar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272L15.bB6Ng01-272L15.g
ACCGA074480GA074481
length1,101785
definitionB6Ng01-272L15.b B6Ng01-272L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,719,716 - 23,720,793)(23,562,050 - 23,562,829)
sequence
gaattctccctcaagactttgccagagacaatgagtttgatggcttttcg
aaaccaaggataaaagaaagcataaatcaaagggttcatggctgagttat
agtaagcgatccaaactaggatttcatacacatacgtgggcgtgatgaac
cctaggaaggcatcaatgatggagtcaatgaagtatggcagccatgaaag
gaggaaggcagccactgcgatgcccagggttttggctgctttcctctctc
tcttggccaccctgtccttgtagctgtctgatgccctggcagtctgcttg
ctcatcttctcaatgttctgagcctgctgtttagcaatgaggaaaatctt
agagtagacagttatcatcacaagggtggggataagaaataataggaaat
tgatgaagacccagctttgattcactgcaagttgacagccacccacacag
gtgagggcactcactagatcctccagcccagcttcattagcccctgtata
aaggagagaaaacccataaatggtggacaggagccaggagaaggtgatgc
acttgccagaaacaaatgcagtaaacctggtggggtaggtcagggggtca
ctgactgcaatatatctatcaacagagatgaagcacaagtggaagataga
acaatagcagaaagatacatcaaaacaagtgtgtaatttacagtaactct
ccccaaagtaccagcatccctccacagacctcactgtgctgaagggcatc
acagtcaatcccaccaagaaatcagcacaggccaaggacaccaccaggaa
gttggcaggggagtgtagctgcctgaaatgaagaattgatgtcatcacca
aggaggttttcaacacacagccagcgcagccccaaagccaaaagactgca
tagaggatgaggcgagggcctgggggaatatggggctcctgacacaggac
cttgtttcaggtttctcatagcacagcttctgtagatgtggcaagagaaa
cattatcactgcttcaggatgcctgtctttgatcccaggaaaaactgttc
attattctgttagcccatgttattgctactccaaagattccttcagaaaa
a
gaattctgagaatctacggatgctgtttcacacataaaggcatggaggcc
ctgagaaaagacatacccagtgcaaaggtttatggaattcaaggagattt
gaatcaattaaaaggcaaaaaaaatacacatttcccaaatctgtacattt
tcctaataataaaaaaaaaccatatgagagaacttttaaggaaaggagta
ttactaattctgtagtcagatttaaattaaaattaaaagatttaaaagaa
aattgttctaccttaaatcaacttatatgtaaacaaagcaagttttcaat
ttaaaaccaggccaaaagtatgcagttgggtagtttgtgattccacatga
acagctgaactgaaagctggcctctgtccttgggcaacttataaagatga
tatgactacaaataacaaaactgtctggaggtggtagcacattcctgtag
tcctggagttcaaggccatacatccttagctatatagagagcctgtgcta
aactgtgtaagatgagagcctgtcccaacccttcaaacagaagagtaaaa
ccctttgaattatctaataatctgttacgtggaaataagattgaagtttg
tttgtttttttctaattttaaaattttattattgcatttgtgagagagag
agagagagagagagagagagagagagagagagagagagagagagagagtt
agttttgtgtatgtgagtgctgccttgaaccacagaagacaaaggacact
tttaacaaatcgtcttacgagtggttctctgtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23719716_23720793
seq2: B6Ng01-272L15.b_51_1151 (reverse)

seq1  TTTTTCTGA--GGATCTTTGGAGTAGCA--TACAT-GGCT-ACAG-ATAA  43
      |||||||||  | |||||||||||||||   |||| |||| |||| ||||
seq2  TTTTTCTGAAGGAATCTTTGGAGTAGCAATAACATGGGCTAACAGAATAA  50

seq1  TG-ACAGTTTTCCCTGGGATC-AAGACA-GCATCCTG-AGCAGTGAT-AT  88
      || |||||||| ||||||||| |||||| |||||||| ||||||||| ||
seq2  TGAACAGTTTTTCCTGGGATCAAAGACAGGCATCCTGAAGCAGTGATAAT  100

seq1  G-TTCTC-TGCCACATCTACAG-AGCTGTGCTATGAG-AACCTGAA--CA  132
      | ||||| |||||||||||||| |||||||||||||| ||||||||   |
seq2  GTTTCTCTTGCCACATCTACAGAAGCTGTGCTATGAGAAACCTGAAACAA  150

seq1  GGTCCTGTGTCAGGAG-CCCATATT-CCCCAGGCCCTCGCCTCATCCTCT  180
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  GGTCCTGTGTCAGGAGCCCCATATTCCCCCAGGCCCTCGCCTCATCCTCT  200

seq1  ATGCAGTC-TTTGGCTTTGGGGCTGCGCTGGCTGTGTG-TGGAAACCTCC  228
      |||||||| ||||||||||||||||||||||||||||| || ||||||||
seq2  ATGCAGTCTTTTGGCTTTGGGGCTGCGCTGGCTGTGTGTTGAAAACCTCC  250

seq1  -TGGTGATGACATCAATTCTTCATTTCAGGCAGCTACACTCCCCTGCCAA  277
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGATGACATCAATTCTTCATTTCAGGCAGCTACACTCCCCTGCCAA  300

seq1  CTTCCTGGTGGTGTCCTTGGCCTGTGCTGATTTCTTGGTGGGATTGACTG  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGTGGTGTCCTTGGCCTGTGCTGATTTCTTGGTGGGATTGACTG  350

seq1  TGATGCCCTTCAGCACAGTGAGGTCTGTGGAGGGATGCTGGTACTTTGGG  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCCTTCAGCACAGTGAGGTCTGTGGAGGGATGCTGGTACTTTGGG  400

seq1  GAGAGTTACTGTAAATTACACACTTGTTTTGATGTATCTTTCTGCTATTG  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTACTGTAAATTACACACTTGTTTTGATGTATCTTTCTGCTATTG  450

seq1  TTCTATCTTCCACTTGTGCTTCATCTCTGTTGATAGATATATTGCAGTCA  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTTCCACTTGTGCTTCATCTCTGTTGATAGATATATTGCAGTCA  500

seq1  GTGACCCCCTGACCTACCCCACCAGGTTTACTGCATTTGTTTCTGGCAAG  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCCCTGACCTACCCCACCAGGTTTACTGCATTTGTTTCTGGCAAG  550

seq1  TGCATCACCTTCTCCTGGCTCCTGTCCACCATTTATGGGTTTTCTCTCCT  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCACCTTCTCCTGGCTCCTGTCCACCATTTATGGGTTTTCTCTCCT  600

seq1  TTATACAGGGGCTAATGAAGCTGGGCTGGAGGATCTAGTGAGTGCCCTCA  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAGGGGCTAATGAAGCTGGGCTGGAGGATCTAGTGAGTGCCCTCA  650

seq1  CCTGTGTGGGTGGCTGTCAACTTGCAGTGAATCAAAGCTGGGTCTTCATC  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGGGTGGCTGTCAACTTGCAGTGAATCAAAGCTGGGTCTTCATC  700

seq1  AATTTCCTATTATTTCTTATCCCCACCCTTGTGATGATAACTGTCTACTC  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTATTATTTCTTATCCCCACCCTTGTGATGATAACTGTCTACTC  750

seq1  TAAGATTTTCCTCATTGCTAAACAGCAGGCTCAGAACATTGAGAAGATGA  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTTCCTCATTGCTAAACAGCAGGCTCAGAACATTGAGAAGATGA  800

seq1  GCAAGCAGACTGCCAGGGCATCAGACAGCTACAAGGACAGGGTGGCCAAG  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGACTGCCAGGGCATCAGACAGCTACAAGGACAGGGTGGCCAAG  850

seq1  AGAGAGAGGAAAGCAGCCAAAACCCTGGGCATCGCAGTGGCTGCCTTCCT  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGGAAAGCAGCCAAAACCCTGGGCATCGCAGTGGCTGCCTTCCT  900

seq1  CCTTTCATGGCTGCCATACTTCATTGACTCCATCATTGATGCCTTCCTAG  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATGGCTGCCATACTTCATTGACTCCATCATTGATGCCTTCCTAG  950

seq1  GGTTCATCACGCCCACGTATGTGTATGAAATCCTAGTTTGGATCGCTTAC  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATCACGCCCACGTATGTGTATGAAATCCTAGTTTGGATCGCTTAC  1000

seq1  TATAACTCAGCCATGAACCCTTTGATTTATGCTTTCTTTTATCCTTGGTT  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCAGCCATGAACCCTTTGATTTATGCTTTCTTTTATCCTTGGTT  1050

seq1  TCGAAAAGCCATCAAACTCATTGTCTCTGGCAAAGTCTTGAGGGAGAATT  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAAAGCCATCAAACTCATTGTCTCTGGCAAAGTCTTGAGGGAGAATT  1100

seq1  C  1078
      |
seq2  C  1101

seq1: chr10_23562050_23562829
seq2: B6Ng01-272L15.g_67_851

seq1  GAATTCTGAGAATCTACGGATGCTGTTTCACACATAAAGGCATGGAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAATCTACGGATGCTGTTTCACACATAAAGGCATGGAGGCC  50

seq1  CTGAGAAAAGACATACCCAGTGCAAAGGTTTATGGAATTCAAGGAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAAGACATACCCAGTGCAAAGGTTTATGGAATTCAAGGAGATTT  100

seq1  GAATCAATTAAAAGGCAAAAAAAATACACATTTCCCAAATCTGTACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAATTAAAAGGCAAAAAAAATACACATTTCCCAAATCTGTACATTT  150

seq1  TCCTAATAATAAAAAAAAACCATATGAGAGAACTTTTAAGGAAAGGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATAATAAAAAAAAACCATATGAGAGAACTTTTAAGGAAAGGAGTA  200

seq1  TTACTAATTCTGTAGTCAGATTTAAATTAAAATTAAAAGATTTAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATTCTGTAGTCAGATTTAAATTAAAATTAAAAGATTTAAAAGAA  250

seq1  AATTGTTCTACCTTAAATCAACTTATATGTAAACAAAGCAAGTTTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCTACCTTAAATCAACTTATATGTAAACAAAGCAAGTTTTCAAT  300

seq1  TTAAAACCAGGCCAAAAGTATGCAGTTGGGTAGTTTGTGATTCCACATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCAGGCCAAAAGTATGCAGTTGGGTAGTTTGTGATTCCACATGA  350

seq1  ACAGCTGAACTGAAAGCTGGCCTCTGTCCTTGGGCAACTTATAAAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGAACTGAAAGCTGGCCTCTGTCCTTGGGCAACTTATAAAGATGA  400

seq1  TATGACTACAAATAACAAAACTGTCTGGAGGTGGTAGCACATTCCTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTACAAATAACAAAACTGTCTGGAGGTGGTAGCACATTCCTGTAG  450

seq1  TCCTGGAGTTCAAGGCCATACATCCTTAGCTATATAGAGAGCCTGTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGTTCAAGGCCATACATCCTTAGCTATATAGAGAGCCTGTGCTA  500

seq1  AACTGTGTAAGATGAGAGCCTGTCCCAACCCTTCAAACAGAAGAGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTAAGATGAGAGCCTGTCCCAACCCTTCAAACAGAAGAGTAAAA  550

seq1  CCCTTTGAATTATCTAATAATCTGTTACGTGGAAATAAGATTGAAGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAATTATCTAATAATCTGTTACGTGGAAATAAGATTGAAGTTTG  600

seq1  TTTGTTTTTTTCTAATTTTAAAATTTTATTATTGCATTTGT----GAGAG  646
      |||||||||||||||||||||||||||||||||||||||||    |||||
seq2  TTTGTTTTTTTCTAATTTTAAAATTTTATTATTGCATTTGTGAGAGAGAG  650

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTT  700

seq1  AGTTTTGTGTATGTGAGTGCTGCCATGAACCACAGAAGACAAAGGACACT  746
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTTTTGTGTATGTGAGTGCTGCCTTGAACCACAGAAGACAAAGGACACT  750

seq1  TTTACCAAATC-TCCTACAAGTGTTTCTCTGTGTC  780
      |||| |||||| || ||| |||| |||||||||||
seq2  TTTAACAAATCGTCTTACGAGTGGTTCTCTGTGTC  785