BAC Information

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BAC

Clone NameB6Ng01-272P17
Chromosome10 (Build37)
Map Location 28,841,595 - 28,842,783
singlet/doubletsinglet
Overlap genenone
Upstream genePtprk, E430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447
Downstream gene6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272P17.bB6Ng01-272P17.g
ACCGA074669GA074670
length1,2211,046
definitionB6Ng01-272P17.b B6Ng01-272P17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagatgagggtttcattcccactttcctacatctcctagtgagt
gtctgtagttctgttgctattaacttatccctgactatcactgtattttt
cttttctagttgccatggcttctgggtcaagtttacatatactgcaagat
ggcattatagtatgaacagggaaaaaatagtactacaaactggcatagta
agtcattcctcaatagcgggagaaaatatgactgcattgtgttaaagtgt
cttttggacatatagactcagagtaaagctaactgtctggctaaggccat
tggtgccctgtaactgatcctatctcagaagcttctagtgctgacctcta
caatgaacaagttcattgtcgctgcactgacctaatcttgacacccaata
aggctttacttcattctgattagattcccatagcaaaaaaaaaaaaaaaa
aaaaaaaagtcatttaacaacatgatttgttgaaaatcttgacatctgat
tcatttagtattgtaccaaagagaaaaaaaagtatttctgaaagatgtta
tattaaaatatatgttattttagaaatgctatagatttcttctttttaaa
aaaaaactagaacaactaaacatttttttgaaaattttatttcagtatct
ccttctctggctccaattccttccatgtcactcattaatttttctcttta
ttcatgatagcttcttgtttaattagtgttgttacacacacacacacaca
cacacacacacacacacacacacacacaggagcacacacaagcacaccta
cacagtcatgcaggtatgtataaacacaaactgcggagatcatgtagtgt
tgtttggatatatttgtgattagataatatatctaattaggagattagat
aaccctatcacagaccttcatccctgaagaacaactcttcttttcttctg
aagctactaatttccctattagctctttcatctgggaatggaagttctta
tcaagattccctccaagtcacactgcccagggccagtctattaagtgcca
ttggtgcatctcttatcttagggccaccatattgttagaattcaataggt
tcagctttctctgttcataatataaaaagaactatgtccagagccaatct
tttctgggacccttcaaggctcttggactattccatctccctctaatgct
tttggattttttgttttttcc

gaattcctgatatttccaagacttttatcatgaaggtgtgttggactttg
ttgaatactttctcagcatttaatgagatgatcatgtgatttttgtcttt
gagtttgtttatattgtgaattactttgatgggtttccatatattgaacc
attcctgtatccctgggatgaagcctttttgatcatgatggatgatcatt
ttgatgtgtttttggattcaatttgtgagaattttattgagtatttttgc
atcaatattcagaagggaaattggtctgaagttctctttctttgttcagt
ctttgtgtggtttaggtatcagagtaattgtggcttcatagaaggaattc
agtagagtaccttctgtttctattttgtggaatagtttgaagagtattgg
aattactctttgaaggtctgattgaactctgcactaaaacccatcaggtc
ctgggcattttttggttgggagaatttttatgactgtttctatttcttta
acagatatgggactgtttagattggtaatctgatcctgatttaattgtgg
gacctggtatctgtctaggactttgtccattttatccaggtttcccaatt
ttgtggagtattgtcttttgatctgatgattttttggatttcctcagatt
ctgttgttatatctcccttttcgtgtttgattttgttaattaggatactg
tccgtgtgccctctagttagtctgactaagggtttatctatcttgttgat
tttctcaaagaaccagctcctggttgattgattctttgtacagttctttt
tctttccatgtagttgattttagccctgagtttgatttatttcctgactt
ctactcctgtttggtgtatttgctttctttttgttccagagcattcaggt
gttgttgtcaaagctgctagtgtatgttttactccagtttcttttctttc
tttttttttataactaggtaattttcctcgggtacattttccaatgctat
cccaaagttccgctgtactcgaccccgcaatccctctagccgctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28841595_28842783
seq2: B6Ng01-272P17.b_45_1265

seq1  GAATTCCAGATGAGGGTTTCATTCCCACTTTCCTACATCTCCTAGTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGAGGGTTTCATTCCCACTTTCCTACATCTCCTAGTGAGT  50

seq1  GTCTGTAGTTCTGTTGCTATTAACTTATCCCTGACTATCACTGTATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAGTTCTGTTGCTATTAACTTATCCCTGACTATCACTGTATTTTT  100

seq1  CTTTTCTAGTTGCCATGGCTTCTGGGTCAAGTTTACATATACTGCAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTAGTTGCCATGGCTTCTGGGTCAAGTTTACATATACTGCAAGAT  150

seq1  GGCATTATAGTATGAACAGGGAAAAAATAGTACTACAAACTGGCATAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTATAGTATGAACAGGGAAAAAATAGTACTACAAACTGGCATAGTA  200

seq1  AGTCATTCCTCAATAGCGGGAGAAAATATGACTGCATTGTGTTAAAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCCTCAATAGCGGGAGAAAATATGACTGCATTGTGTTAAAGTGT  250

seq1  CTTTTGGACATATAGACTCAGAGTAAAGCTAACTGTCTGGCTAAGGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGACATATAGACTCAGAGTAAAGCTAACTGTCTGGCTAAGGCCAT  300

seq1  TGGTGCCCTGTAACTGATCCTATCTCAGAAGCTTCTAGTGCTGACCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCCTGTAACTGATCCTATCTCAGAAGCTTCTAGTGCTGACCTCTA  350

seq1  CAATGAACAAGTTCATTGTCGCTGCACTGACCTAATCTTGACACCCAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACAAGTTCATTGTCGCTGCACTGACCTAATCTTGACACCCAATA  400

seq1  AGGCTTTACTTCATTCTGATTAGATTCCCATAGCAAAAAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTACTTCATTCTGATTAGATTCCCATAGCAAAAAAAAAAAAAAAA  450

seq1  AAAAAAAAGTCATTTAACAACATGATTTGTTGAAAATCTTGACATCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGTCATTTAACAACATGATTTGTTGAAAATCTTGACATCTGAT  500

seq1  TCATTTAGTATTGTACCAAAGAGAAAAAAAAGTATTTCTGAAAGATGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGTATTGTACCAAAGAGAAAAAAAAGTATTTCTGAAAGATGTTA  550

seq1  TATTAAAATATATGTTATTTTAGAAATGCTATAGATTTCTTCTTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATATATGTTATTTTAGAAATGCTATAGATTTCTTCTTTTTAAA  600

seq1  AAAAAACTAGAACAACTAAACATTTTTTTGAAAATTTTATTTCAGTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTAGAACAACTAAACATTTTTTTGAAAATTTTATTTCAGTATCT  650

seq1  CCTTCTCTGGCTCCAATTCCTTCCATGTCACTCATTAATTTTTCTCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGGCTCCAATTCCTTCCATGTCACTCATTAATTTTTCTCTTTA  700

seq1  TTCATGATAGCTTCTTGTTTAATTAGTGTTGTTACACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATAGCTTCTTGTTTAATTAGTGTTGTTACACACACACACACACA  750

seq1  CACACACACACACACACACACACACACAGGAGCACACACAAGCACACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAGGAGCACACACAAGCACACCTA  800

seq1  CACAGTCATGCAGGTATGTATAAACACAAACTGCGGAGATCATGTAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCATGCAGGTATGTATAAACACAAACTGCGGAGATCATGTAGTGT  850

seq1  TGTTTGGATATATTTGTGATTAGATAATATATCTAATTAGGAGATTAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGATATATTTGTGATTAGATAATATATCTAATTAGGAGATTAGAT  900

seq1  AA-CCTATCACAGACC-TCATCCCTGAAG-ACAACTC-TCTTT--CTCTG  944
      || ||||||||||||| |||||||||||| ||||||| |||||   ||||
seq2  AACCCTATCACAGACCTTCATCCCTGAAGAACAACTCTTCTTTTCTTCTG  950

seq1  AAGCTACTAA-TTCCCTA-TAGCTC-TTCATCT-GGAATGGA--GTCTTA  988
      |||||||||| ||||||| |||||| ||||||| ||||||||   |||||
seq2  AAGCTACTAATTTCCCTATTAGCTCTTTCATCTGGGAATGGAAGTTCTTA  1000

seq1  TC-AGATTCCCTCC-AGTCACACTGCC--AGGCCAGTCTAT--AGTGCCA  1032
      || ||||||||||| ||||||||||||   |||||||||||  |||||||
seq2  TCAAGATTCCCTCCAAGTCACACTGCCCAGGGCCAGTCTATTAAGTGCCA  1050

seq1  TT-GTGCATCTCCTATCT--AGGCAACCATA-TGTTAGAATTTCATAGGT  1078
      || ||||||||| |||||   ||| |||||| ||||||||||  ||||||
seq2  TTGGTGCATCTCTTATCTTAGGGCCACCATATTGTTAGAATTCAATAGGT  1100

seq1  TCAGC-TTCTCTG-TCAT-ATATAAAA--GACTATGT-CAGAGC--AGTT  1120
      ||||| ||||||| |||| ||||||||   ||||||| ||||||  |  |
seq2  TCAGCTTTCTCTGTTCATAATATAAAAAGAACTATGTCCAGAGCCAATCT  1150

seq1  CTTCTGG--CCCT--CAGGCTCTTTGACTATTCCCTCTCCTCTTTAATGT  1166
       ||||||  ||||   |||||||| ||||||||| ||||| || ||||| 
seq2  TTTCTGGGACCCTTCAAGGCTCTTGGACTATTCCATCTCC-CTCTAATG-  1198

seq1  TTTTTGGTTTTTTTGTTTTTTCC  1189
       |||||| |||||||||||||||
seq2  CTTTTGGATTTTTTGTTTTTTCC  1221


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