BAC Information

Click to search

BAC

Clone NameB6Ng01-273A15
Chromosome10 (Build37)
Map Location 120,787,532 - 120,879,957
singlet/doubletdoublet
Overlap gene4930505D03Rik, Gns, Rassf3
Upstream geneHmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911, LOC100043498
Downstream geneLOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403, Srgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273A15.bB6Ng01-273A15.g
ACCGA074711GA074712
length1,211996
definitionB6Ng01-273A15.b B6Ng01-273A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,878,726 - 120,879,957)(120,787,532 - 120,788,518)
sequence
gaattccaggccagtcaatgctaccttgagagaaagaccctgcttcaaca
aacaaacaaacaaacaaacaaaagtaaaacaaaaccccaacccccaaggc
ttactgcttttatccaattaaaaaagaaaaaataattttttcttactgga
aaattgaagttaccggaatatgcctgtagagaaaattgtctttgaggtta
ttgctggcgtgtgtagacttgaaaggaagtacatgctaggaactactaga
tcgtaaagtcgaaggctatactaataggacagagtgggctgtgaccgtca
cgagtttagggatttttttttaaagaagattgtttttagaaagattatta
ttattatttatttatttattttatttatattaatacactgttgctgtttt
cagactcatcagaagagggcatcaaatctcattacaggtggtcgtgagcc
accatgtggctgctgggatttgaactcaggaccttcggaagagcagtcag
tgctcttaaccgctgagccgtctctccagccctagggtttctttcttgat
taaaaatgtaaacagatcatggtgcatatacttaaactgttgaattgtat
tcttaagtaggtagtcttcactgtcaggagacacccttaactactcctct
gggtgtgttaaaccaaatagggaagacgtgctccgactgtgggcgcgggg
ctcccaaaccaaaggtgagcagaactgcctgatgcaggttgatctctctg
cttccggctcctggcgcagcgaaccagctacttccggccgtgatggaccg
ttcttagaaataatctttctaagaacaatcttcttctcagactgacaaac
ccgccattccttacgttgctttttctgggtccgtttctcctttctggtct
tttcatctcctaaagcagtcgcagtgaaagacagatcaggcaaacactcg
ttctctcctgtgcagaaatgcagtggtcccagatgtgtgcagtggaagtt
gttacacagaccgagtctgcagcccagagatgaagcccgctcagaaactc
tgatagagaaaaatagccacctcactcacttgatgaaattcaggatttct
gatgggggtccctcgaattgttaaggccgtcaaccaatagttggttcgag
ttaatagaagtgacaatgcacgcactggttaggattcagtctcgagatag
gctcacatcca
gaattcacgcgctctgctgcgaactgcattatcgaattattctgcctcac
tagttaaaaatccctgtccaagcggcgtggctagggaagggggtggggtg
ggaagccctagaagtcggctctcttctcccagggtcctctaggaaatttc
tagtaagcacggaagaaacgccaaactagtcctaacagctgttcaggtaa
agttaagagtctacactgcccctagcttcggacttctgagaggcgtgggg
gaggtggaaagactcgaccacgctccgagccaccctagcagagggggagg
ggctgggcattaggaaatgtctagggaaagagtgacagaagagtcccgag
tcagatgaaaggagactccacactctccgggtgtgcgggcagagcggcag
cgcacaggtggcgcaggtgggcaactagcacaggtggtcaagcgggccag
gtggcgcaggtgggcaactggagcagataatgcaaatggcgcagtggggc
aggtggcacagataggcaggagtccccgcgccctcgctcacctttccgct
gcaggtactgcatctggagccgcaggctcgggcgctcccgcagctcctgc
agcactcgggagtcgccagcgccgcggccgcccaggaatgcgtcggaacc
cgaggtctcggtggagctgtccaggctgtcccttcgcagggggcggccct
gggacgcacggtccccgccggctgccacctcctcctcctcggtgcagctg
tagagctcggtgagcaacccgctcactagggacgccgtgcggctcgtgcg
gccgtcgggctgcggctccaagtcgccctcgtcccgccgggtgccccgcc
gcctccttcggattgctgcgggtcccacgtcctgcccgctggaaggacct
ccatggctcgaaccgccgcggcgcccgccagtttccgggaggggtgcgcc
ctcgcgggcagcaagagtcccccagcagggggctcgaaaatgccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_120878726_120879957
seq2: B6Ng01-273A15.b_32_1242 (reverse)

seq1  TGGATGTGAGCTTATCCCTTCGAGACTGATTTCTTTCACACAGTTGCTGC  50
      ||||||||||| ||||   |||||||||| | ||   |  ||||   |||
seq2  TGGATGTGAGCCTATC---TCGAGACTGAATCCT---AACCAGTGCGTGC  44

seq1  ATTTGTCAAACTTCTATTTTACTTCGGA-CAACTATTTGGTTGACGGCCC  99
      | |||||  |||||||  |||  ||| | |||||| ||||||||||| ||
seq2  A-TTGTC--ACTTCTA--TTAACTCGAACCAACTA-TTGGTTGACGG-CC  87

seq1  TTAAACAATCGAGGGACCCACATCAGGAAATCCTGGATTTTCCATCAAGT  149
      ||||  | ||||||||||| ||||| ||||||||| ||||  ||||||||
seq2  TTAACAATTCGAGGGACCCCCATCA-GAAATCCTGAATTT--CATCAAGT  134

seq1  GAGTGAGGTGGCCTATTTTTCTCTAATCAGAGTTTTCCTGAGCGGGCCTT  199
      ||||||||||| |||||||||||| ||||||||||  ||||||||| |||
seq2  GAGTGAGGTGG-CTATTTTTCTCT-ATCAGAGTTT--CTGAGCGGG-CTT  179

seq1  CATCTCTGGGCTTGCAGACTCGGTCTGTGTAAACAACTTCCACTGCACAC  249
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  CATCTCTGGGC-TGCAGACTCGGTCTGTGT-AACAACTTCCACTGCACAC  227

seq1  ATCTGGGACCACTGCATTTCTGCACAGGGGAGAACGAGTGTTTGCCTGAT  299
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATCTGGGACCACTGCATTTCTGCACAGGAGAGAACGAGTGTTTGCCTGAT  277

seq1  CTGTCTTTCACTGCGACTGCTTTAGGAGATGAAAAGACCAG-AAGGAGAA  348
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGTCTTTCACTGCGACTGCTTTAGGAGATGAAAAGACCAGAAAGGAGAA  327

seq1  ACGGACCCAGAAAAAGCAACGTAAGGAATGGCGGGTTTGTCAGTCTGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGACCCAGAAAAAGCAACGTAAGGAATGGCGGGTTTGTCAGTCTGAGA  377

seq1  AGAAGATTGTTCTTAGAAAGATTATTTCTAAGAACGGTCCATCACGGCCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTGTTCTTAGAAAGATTATTTCTAAGAACGGTCCATCACGGCCG  427

seq1  GAAGTAGCTGGTTCGCTGCGCCAGGAGCCGGAAGCAGAGAGATCAACCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGCTGGTTCGCTGCGCCAGGAGCCGGAAGCAGAGAGATCAACCTG  477

seq1  CATCAGGCAGTTCTGCTCACCTTTGGTTTGGGAGCCCCGCGCCCACAGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGCAGTTCTGCTCACCTTTGGTTTGGGAGCCCCGCGCCCACAGTC  527

seq1  GGAGCACGTCTTCCCTATTTGGTTTAACACACCCAGAGGAGTAGTTAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACGTCTTCCCTATTTGGTTTAACACACCCAGAGGAGTAGTTAAGG  577

seq1  GTGTCTCCTGACAGTGAAGACTACCTACTTAAGAATACAATTCAACAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCTGACAGTGAAGACTACCTACTTAAGAATACAATTCAACAGTT  627

seq1  TAAGTATATGCACCATGATCTGTTTACATTTTTAATCAAGAAAGAAACCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATATGCACCATGATCTGTTTACATTTTTAATCAAGAAAGAAACCC  677

seq1  TAGGGCTGGAGAGACGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGGAGAGACGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCGA  727

seq1  AGGTCCTGAGTTCAAATCCCAGCAGCCACATGGTGGCTCACGACCACCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGAGTTCAAATCCCAGCAGCCACATGGTGGCTCACGACCACCTG  777

seq1  TAATGAGATTTGATGCCCTCTTCTGATGAGTCTGAAAACAGCAACAGTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGATTTGATGCCCTCTTCTGATGAGTCTGAAAACAGCAACAGTGT  827

seq1  ATTAATATAAATAAAATAAATAAATAAATAATAATAATAATCTTTCTAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATAAATAAAATAAATAAATAAATAATAATAATAATCTTTCTAAA  877

seq1  AACAATCTTCTTTAAAAAAAAATCCCTAAACTCGTGACGGTCACAGCCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTTCTTTAAAAAAAAATCCCTAAACTCGTGACGGTCACAGCCCA  927

seq1  CTCTGTCCTATTAGTATAGCCTTCGACTTTACGATCTAGTAGTTCCTAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCTATTAGTATAGCCTTCGACTTTACGATCTAGTAGTTCCTAGC  977

seq1  ATGTACTTCCTTTCAAGTCTACACACGCCAGCAATAACCTCAAAGACAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTTCCTTTCAAGTCTACACACGCCAGCAATAACCTCAAAGACAAT  1027

seq1  TTTCTCTACAGGCATATTCCGGTAACTTCAATTTTCCAGTAAGAAAAAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTACAGGCATATTCCGGTAACTTCAATTTTCCAGTAAGAAAAAAT  1077

seq1  TATTTTTTCTTTTTTAATTGGATAAAAGCAGTAAGCCTTGGGGGTTGGGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTCTTTTTTAATTGGATAAAAGCAGTAAGCCTTGGGGGTTGGGG  1127

seq1  TTTTGTTTTACTTTTGTTTGTTTGTTTGTTTGTTTGTTGAAGCAGGGTCT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTACTTTTGTTTGTTTGTTTGTTTGTTTGTTGAAGCAGGGTCT  1177

seq1  TTCTCTCAAGGTAGCATTGACTGGCCTGGAATTC  1232
      ||||||||||||||||||||||||||||||||||
seq2  TTCTCTCAAGGTAGCATTGACTGGCCTGGAATTC  1211

seq1: chr10_120787532_120788518
seq2: B6Ng01-273A15.g_63_1056

seq1  GAATTCACGCGCTCTGCTGCGAACTGCATTATCGAATTATTCTGCCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGCGCTCTGCTGCGAACTGCATTATCGAATTATTCTGCCTCAC  50

seq1  TAGTTAAAAATCCCTGTCCAAGCGGCGTGGCTAGGGAAGGGGGTGGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAAAATCCCTGTCCAAGCGGCGTGGCTAGGGAAGGGGGTGGGGTG  100

seq1  GGAAGCCCTAGAAGTCGGCTCTCTTCTCCCAGGGTCCTCTAGGAAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCTAGAAGTCGGCTCTCTTCTCCCAGGGTCCTCTAGGAAATTTC  150

seq1  TAGTAAGCACGGAAGAAACGCCAAACTAGTCCTAACAGCTGTTCAGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGCACGGAAGAAACGCCAAACTAGTCCTAACAGCTGTTCAGGTAA  200

seq1  AGTTAAGAGTCTACACTGCCCCTAGCTTCGGACTTCTGAGAGGCGTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAGTCTACACTGCCCCTAGCTTCGGACTTCTGAGAGGCGTGGGG  250

seq1  GAGGTGGAAAGACTCGACCACGCTCCGAGCCACCCTAGCAGAGGGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGAAAGACTCGACCACGCTCCGAGCCACCCTAGCAGAGGGGGAGG  300

seq1  GGCTGGGCATTAGGAAATGTCTAGGGAAAGAGTGACAGAAGAGTCCCGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGCATTAGGAAATGTCTAGGGAAAGAGTGACAGAAGAGTCCCGAG  350

seq1  TCAGATGAAAGGAGACTCCACACTCTCCGGGTGTGCGGGCAGAGCGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGAAAGGAGACTCCACACTCTCCGGGTGTGCGGGCAGAGCGGCAG  400

seq1  CGCACAGGTGGCGCAGGTGGGCAACTAGCACAGGTGGTCAAGCGGGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAGGTGGCGCAGGTGGGCAACTAGCACAGGTGGTCAAGCGGGCCAG  450

seq1  GTGGCGCAGGTGGGCAACTGGAGCAGATAATGCAAATGGCGCAGTGGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGCAGGTGGGCAACTGGAGCAGATAATGCAAATGGCGCAGTGGGGC  500

seq1  AGGTGGCACAGATAGGCAGGAGTCCCCGCGCCCTCGCTCACCTTTCCGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCACAGATAGGCAGGAGTCCCCGCGCCCTCGCTCACCTTTCCGCT  550

seq1  GCAGGTACTGCATCTGGAGCCGCAGGCTCGGGCGCTCCCGCAGCTCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTACTGCATCTGGAGCCGCAGGCTCGGGCGCTCCCGCAGCTCCTGC  600

seq1  AGCACTCGGGAGTCGCCAGCGCCGCGGCCGCCCAGGAATGCGTCGGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCGGGAGTCGCCAGCGCCGCGGCCGCCCAGGAATGCGTCGGAACC  650

seq1  CGAGGTCTCGGTGGAGCTGTCCAGGCTGTCCCTTCGCAGGGGGCGGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGTCTCGGTGGAGCTGTCCAGGCTGTCCCTTCGCAGGGGGCGGCCCT  700

seq1  GGGACGCACGGTCCCCGCCGGCTGCCACCTCCTCCTCCTCGGTGCAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGCACGGTCCCCGCCGGCTGCCACCTCCTCCTCCTCGGTGCAGCTG  750

seq1  TAGAGCTCGGTGAGCAACCCGCTCACTAGGGACGCCGTGCGGCTCGTGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTCGGTGAGCAACCCGCTCACTAGGGACGCCGTGCGGCTCGTGCG  800

seq1  GCCGTCGGGCTGCGGCTCCAAGTCGCCCTCGT-CCGCCGGGTGCCCCGCC  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCCGTCGGGCTGCGGCTCCAAGTCGCCCTCGTCCCGCCGGGTGCCCCGCC  850

seq1  GCCTCC-TCGGATTGCTGCGGGTCCCACGTCCTGCCCGCTGGAAGGACCT  898
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTCGGATTGCTGCGGGTCCCACGTCCTGCCCGCTGGAAGGACCT  900

seq1  CCATGGCTCGAACCGCCGCGGCGCCCGCCAG-TTCCGGGA-GGGCGCGGC  946
      ||||||||||||||||||||||||||||||| |||||||| ||| ||| |
seq2  CCATGGCTCGAACCGCCGCGGCGCCCGCCAGTTTCCGGGAGGGGTGCGCC  950

seq1  CACGCGGGCAGCAAAGAGT-CCCCAGCAGGGG--TCG-AAATGCC  987
      | |||||||||| |||||| ||||||||||||  ||| |||||||
seq2  CTCGCGGGCAGC-AAGAGTCCCCCAGCAGGGGGCTCGAAAATGCC  994