BAC Information

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BAC

Clone NameB6Ng01-273D08
Chromosome10 (Build37)15 (Build37)
Map Location 129,762,070 - 129,762,28394,489,370 - 94,490,511
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
Downstream gene5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273D08.bB6Ng01-273D08.g
ACCGA074839GA074840
length1,0091,142
definitionB6Ng01-273D08.b B6Ng01-273D08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(129,762,070 - 129,762,283)(94,489,370 - 94,490,511)
sequence
gaattcagagctgaggccatgggagaggatcgaacactgaacattctgac
attgtcaatggataaatccatcactggaggctgtgttctccctgacactg
tccctcatttctagccgatatgtgataagagcttgtcaccacccatctgt
gcatcatcatgagcctaaaagcagccagaccatgatacggcagctgaaat
aagcatttcttccttttaacttatcttgggcattttgtcacagtgacagg
aaagtaacacagcatccatcctgaaaagttataaaaacaattattgtaag
ataaatatttaaaaaaaggaaagacccagaagatgcttcaaccggtaaga
aggacacatgcttcactatgttcatagcagccttatttataatagccaga
agctggaaagaacccagatgcccctcaacagaggaatggatacagaaaat
atggtacatttacacaatggagtactactcagctattaaaaacaatgaat
ttatggaattcttgggcaaatggatatatgtggaggatatcatcctgagt
gacgtaaaccaaataacaaaagaagtcacttgatatgcactcactgataa
gtggatattagcccagaaacttagaatacccatgatacaatttgcaaaac
acaagaaaataaagaagaaggaagaccaatgagtggatacttcattcctt
cttaggatagggaacaaaatacccatggaagaagttacagagacaaagtt
tggagctgagacgaaaggatggaccatccagagaccgccacacccgggga
tccatcccataatcaaccaccaaatgcagacactattgcatatgccagca
tgattttgctgaaaggaccctgatatagctgtctcttgtgagcctaggtc
agtgcctggcaaatacagaagtggatgctcacagtcggctattggatgga
acacagggcccccaatggagaaactagagaaaaacacccaaggggctgaa
gtggtctgc
gaattcactctccaagttaccccacagcgggccccattctagaggagcaa
acacagaggtcctcttgtgagagaagtcaccagtgcgtgcagcttaacgg
agagaggcgccccccaggcctcttcctcactttgcctgccatgtttggat
tctggaccgttctgcattgtattttaaggagcccgactccttcctgtaga
ctctgtcttggcatggtttatacatgggctcggtttaatccatcccagat
ttatccaacccagatgagtgctaattagttttttctgcatttgaggtagc
ctgctcctagcctctcagtgttgtcatgaataattgagagctgctggctc
accgagccaccctgctacagaagccactgcccagcccccaggaggctggc
ttcactgcagccagaatgacagagttccatctggcgagcccagtgccaca
tgaagcttagtacgtgggcattaggaaagaaacctgtgtgcatcgggatg
cacagatgtgccctgtgtcagagtaaaaatcaaagcttccttcaaaccac
tggagtctgtctgtagcgtttcttccagaaaaccggcttctcacttatac
ttcattatacagtgaagtcccaatgcctctccttatgtctccaaactgaa
gatcaaacagttggcatgattaaaggctgccataaattacaaatttggaa
gctgcatcttgtttttaaaaaattgtgtgtatgtgtgcgtgtgcaccata
gcatgtatgtcgaggccagaggaatttcgtgtgaattcgttctctcctac
catgtgtgtcccagggatcggactccagctgtctaggttggcagcaagca
tcccagtcagcatgtctttttaaaaattaattttcagcccttcctggatg
gcattctcttacttgaacggtatgtataaaaccagagctatcctacattt
agaaaactaataactttttgtttataactagtttgatttttttttaatgt
ttgttttgtgtgcaaaaagactcagttgcgcctttagctcggatcaatgt
caaagctgttttgtgggggctgtgaggtttgcagcctgtttgggggttgt
agaattgcagtgtgtgccaacctcccttctgtagtacagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129762070_129762283
seq2: B6Ng01-273D08.b_354_829

seq1  --------------------------------------------------  0
                                                        
seq2  ATTTAAAAAAAGGAAAGACCCAGAAGATGCTTCAACCGGTAAGAAGGACA  50

seq1  --------------------------------------------------  0
                                                        
seq2  CATGCTTCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG  100

seq1  --------------------------------------------------  0
                                                        
seq2  AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATATGGTA  150

seq1  ----------------------------ATTTAAAAAAAGGAA-------  15
                                  ||| |||| || |||       
seq2  CATTTACACAATGGAGTACTACTCAGCTATTAAAAACAATGAATTTATGG  200

seq1  -------AGGCAAA-GGAGTTACTGTTGAAGGCAAGCTTC----------  47
              |||||| |||  || || || |||  | | ||          
seq2  AATTCTTGGGCAAATGGATATA-TG-TGGAGGATATCATCCTGAGTGACG  248

seq1  AACACCACAGGGTAAACTGAGGAGGGC---TGAGTGTAGAGTCAGTGACT  94
       | |||| |     |||  | || | |   ||| | |  | ||| |||  
seq2  TAAACCAAA----TAACAAAAGAAGTCACTTGA-TATGCACTCACTGATA  293

seq1  GGGGGCTGGT-GC--------------------TGATA------GCAACA  117
       | || |  | ||                    |||||      |||| |
seq2  AGTGGATATTAGCCCAGAAACTTAGAATACCCATGATACAATTTGCAAAA  343

seq1  GGTTTGATAGCA-------------ACCAA-CAGGGG-----------CT  142
           || |  |             |||||  || ||           ||
seq2  CACAAGAAAATAAAGAAGAAGGAAGACCAATGAGTGGATACTTCATTCCT  393

seq1  GCTGCTGATGG---------CAGCCA-GTAACTAGAAAAAAAGA-AAGGA  181
       ||   ||| |          | ||| | ||  ||  | | ||| || | 
seq2  TCTTAGGATAGGGAACAAAATACCCATGGAAGAAGTTACAGAGACAAAGT  443

seq1  TTGGAGCTAAAACGAAAGGATGGACCATCCAGA  214
      |||||||| | ||||||||||||||||||||||
seq2  TTGGAGCTGAGACGAAAGGATGGACCATCCAGA  476

seq1: chr15_94489370_94490511
seq2: B6Ng01-273D08.g_66_1207

seq1  GAATTCACTCTCCAAGTTACCCCACAGCGGGCCCCATTCTAGAGGAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCCAAGTTACCCCACAGCGGGCCCCATTCTAGAGGAGCAA  50

seq1  ACACAGAGGTCCTCTTGTGAGAGAAGTCACCAGTGCGTGCAGCTTAACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGGTCCTCTTGTGAGAGAAGTCACCAGTGCGTGCAGCTTAACGG  100

seq1  AGAGAGGCGCCCCCCAGGCCTCTTCCTCACTTTGCCTGCCATGTTTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCGCCCCCCAGGCCTCTTCCTCACTTTGCCTGCCATGTTTGGAT  150

seq1  TCTGGACCGTTCTGCATTGTATTTTAAGGAGCCCGACTCCTTCCTGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACCGTTCTGCATTGTATTTTAAGGAGCCCGACTCCTTCCTGTAGA  200

seq1  CTCTGTCTTGGCATGGTTTATACATGGGCTCGGTTTAATCCATCCCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTTGGCATGGTTTATACATGGGCTCGGTTTAATCCATCCCAGAT  250

seq1  TTATCCAACCCAGATGAGTGCTAATTAGTTTTTTCTGCATTTGAGGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAACCCAGATGAGTGCTAATTAGTTTTTTCTGCATTTGAGGTAGC  300

seq1  CTGCTCCTAGCCTCTCAGTGTTGTCATGAATAATTGAGAGCTGCTGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTAGCCTCTCAGTGTTGTCATGAATAATTGAGAGCTGCTGGCTC  350

seq1  ACCGAGCCACCCTGCTACAGAAGCCACTGCCCAGCCCCCAGGAGGCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGCCACCCTGCTACAGAAGCCACTGCCCAGCCCCCAGGAGGCTGGC  400

seq1  TTCACTGCAGCCAGAATGACAGAGTTCCATCTGGCGAGCCCAGTGCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCAGCCAGAATGACAGAGTTCCATCTGGCGAGCCCAGTGCCACA  450

seq1  TGAAGCTTAGTACGTGGGCATTAGGAAAGAAACCTGTGTGCATCGGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTAGTACGTGGGCATTAGGAAAGAAACCTGTGTGCATCGGGATG  500

seq1  CACAGATGTGCCCTGTGTCAGAGTAAAAATCAAAGCTTCCTTCAAACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGTGCCCTGTGTCAGAGTAAAAATCAAAGCTTCCTTCAAACCAC  550

seq1  TGGAGTCTGTCTGTAGCGTTTCTTCCAGAAAACCGGCTTCTCACTTATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTGTCTGTAGCGTTTCTTCCAGAAAACCGGCTTCTCACTTATAC  600

seq1  TTCATTATACAGTGAAGTCCCAATGCCTCTCCTTATGTCTCCAAACTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATACAGTGAAGTCCCAATGCCTCTCCTTATGTCTCCAAACTGAA  650

seq1  GATCAAACAGTTGGCATGATTAAAGGCTGCCATAAATTACAAATTTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAACAGTTGGCATGATTAAAGGCTGCCATAAATTACAAATTTGGAA  700

seq1  GCTGCATCTTGTTTTTAAAAAATTGTGTGTATGTGTGCGTGTGCACCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATCTTGTTTTTAAAAAATTGTGTGTATGTGTGCGTGTGCACCATA  750

seq1  GCATGTATGTCGAGGCCAGAGGAATTTCGTGTGAATTCGTTCTCTCCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATGTCGAGGCCAGAGGAATTTCGTGTGAATTCGTTCTCTCCTAC  800

seq1  CATGTGTGTCCCAGGGATCGGACTCCAGCTGTCTAGGTTGGCAGCAAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTCCCAGGGATCGGACTCCAGCTGTCTAGGTTGGCAGCAAGCA  850

seq1  TCCCAGTCAGCATGTCTTTTTAAAAATTAATTTTCAGCCCTTCCTGGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTCAGCATGTCTTTTTAAAAATTAATTTTCAGCCCTTCCTGGATG  900

seq1  GCATTCTCTTACTTGAACGGTATGTATAAAACCAGAGCTATCCTACAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCATTCTCTTACTTGAACGGTATGTATAAAACCAGAGCTATCCTACATTT  950

seq1  AGAAAACTAATAACTTTTTGTTTATAACTAGTTTGA-TTTTTTTTAATGT  999
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  AGAAAACTAATAACTTTTTGTTTATAACTAGTTTGATTTTTTTTTAATG-  999

seq1  TTTGTTTTGTGTGCAAAAAGACTCAG-TGCGCC-TTAGCTCGGGAATCCA  1047
      |||||||||||||||||||||||||| |||||| |||||||||  || ||
seq2  TTTGTTTTGTGTGCAAAAAGACTCAGTTGCGCCTTTAGCTCGG--AT-CA  1046

seq1  ATGTCAAAGCTGTTTTGT-GGGGTTGTGAGGTTTGCAG-CTGTTTGGGGG  1095
      |||||||||||||||||| |||| |||||||||||||| |||||||||||
seq2  ATGTCAAAGCTGTTTTGTGGGGGCTGTGAGGTTTGCAGCCTGTTTGGGGG  1096

seq1  TTGTAAGGAATTGCAAGTGTGTGCCA--CT-CCTTCTGGGAGTACAGTCT  1142
      |||||  ||||||| |||||||||||  || |||||| | ||||||||||
seq2  TTGTA--GAATTGC-AGTGTGTGCCAACCTCCCTTCT-GTAGTACAGTCT  1142