BAC Information

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BAC

Clone NameB6Ng01-273G08
Chromosome10 (Build37)
Map Location 21,505,973 - 21,641,969
singlet/doubletdoublet
Overlap geneLOC628133
Upstream geneLOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936
Downstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273G08.bB6Ng01-273G08.g
ACCGA074979GA074980
length1,221495
definitionB6Ng01-273G08.b B6Ng01-273G08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,505,973 - 21,507,186)(21,641,469 - 21,641,969)
sequence
gaattccaagcataattgagaaatgagttcaaaatcatcggtgaagacct
ggtgtttcttcgaccaataataacaataaggagcaaattgacgaagtaga
aagttatggcaggaaaaaatggattttttctgaaaaaaaaaaacaccctt
ttattgacattataggacagatttattagccactgttaaataaaatcaaa
tcttaaaaacacattagtaaaatactgttctaacaattttgttttttaag
attttattgttattattttaattatgtatatatgtatgtcttgagcatgg
gttatgcgatgcccacccaacaggattttgggtctccagaaactggagat
caggtggctgtgagctactgacattagtactaggaactgaacttggggcc
tccacaatagaagtatgtgttcctaaccactgagccatctctccagccct
aacaattctatccttttaataaagagcaaagtaacattatctgtaatcta
gcaactgctttgatttttcttggctgaatacttggatctcttctctattg
ttatgatataggagaaatatctgtctgtattacattgttttcatcttctc
tggagtcttcagttgcgggcagtatatcttgaaagcatgtgaaagacctg
ggagtatcatcactacaagacatctgtcaatcacctctccttctgcactg
accaagcatcatgtgagttagttactctgagggctacaatgacccgtgac
caccaggacttgaaattgcaatgccagaacagaacaaatgcataaaaact
agttatcaacagatcaatgtatcctagacacatccacacttaaatgacag
gtgatagaagtaatccaaagacaaggccccactccctgccctgcccccac
tctcagatccaagccacttgctgtctccagggagaacaaaccgagctgtc
catggaactgtactaaagagagctgtgtcggactctacagagggttagga
ttctcttcttgtaaatctcccctttcacacgttctgacagtttgtcctac
catagagttaaggacaaatttcagggaatgatataggcttgaaggccccg
tggaactcttaaggagaatcagtgacaggccaaccacattccaacggcag
ctgccaaatgtgtagcctggtagtcagtgcatttgttgagcgacactcag
gtaacgggttggacatctctt
cccagctttcggtgcctttgggatttcccagtcccttcccatgcatcctg
ttctagattcccaaggtctaaccttgcatttctccaggcctggtctgggg
gatggctggtgagggcccaggaggaagagagtggaaagggagggagacat
gtctgtaccatcctccatgttggaactcacaggaagccccacccccagaa
tcagtgtgttgtgtgtgttacacaccacacaagtctcagccttgaactca
gtaatttaaagtccccttctgaccccactaaaataccacccactgatcgg
tgacaggcagagctcagggactcgttaatatgaggattttgaaatgaaga
taaagttcttattatttcttaaaattgtaggactgatcctttctttggaa
ttagcctgtcttgagcagaggaaatgaagaagaggaaggggggagaaggt
ggaggaggaaaaggagagagaaaaggaaactaatgctatgactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21505973_21507186
seq2: B6Ng01-273G08.b_42_1262

seq1  GAATTCCAAGCATAATTGAGAAATGAGTTCAAAATCATCGGTGAAGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCATAATTGAGAAATGAGTTCAAAATCATCGGTGAAGACCT  50

seq1  GGTGTTTCTTCGACCAATAATAACAATAAGGAGCAAATTGACGAAGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCTTCGACCAATAATAACAATAAGGAGCAAATTGACGAAGTAGA  100

seq1  AAGTTATGGCAGGAAAAAATGGATTTTTTCTGAAAAAAAAAAACACCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGGCAGGAAAAAATGGATTTTTTCTGAAAAAAAAAAACACCCTT  150

seq1  TTATTGACATTATAGGACAGATTTATTAGCCACTGTTAAATAAAATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGACATTATAGGACAGATTTATTAGCCACTGTTAAATAAAATCAAA  200

seq1  TCTTAAAAACACATTAGTAAAATACTGTTCTAACAATTTTGTTTTTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAACACATTAGTAAAATACTGTTCTAACAATTTTGTTTTTTAAG  250

seq1  ATTTTATTGTTATTATTTTAATTATGTATATATGTATGTCTTGAGCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGTTATTATTTTAATTATGTATATATGTATGTCTTGAGCATGG  300

seq1  GTTATGCGATGCCCACCCAACAGGATTTTGGGTCTCCAGAAACTGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCGATGCCCACCCAACAGGATTTTGGGTCTCCAGAAACTGGAGAT  350

seq1  CAGGTGGCTGTGAGCTACTGACATTAGTACTAGGAACTGAACTTGGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGCTGTGAGCTACTGACATTAGTACTAGGAACTGAACTTGGGGCC  400

seq1  TCCACAATAGAAGTATGTGTTCCTAACCACTGAGCCATCTCTCCAGCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATAGAAGTATGTGTTCCTAACCACTGAGCCATCTCTCCAGCCCT  450

seq1  AACAATTCTATCCTTTTAATAAAGAGCAAAGTAACATTATCTGTAATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTCTATCCTTTTAATAAAGAGCAAAGTAACATTATCTGTAATCTA  500

seq1  GCAACTGCTTTGATTTTTCTTGGCTGAATACTTGGATCTCTTCTCTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGCTTTGATTTTTCTTGGCTGAATACTTGGATCTCTTCTCTATTG  550

seq1  TTATGATATAGGAGAAATATCTGTCTGTATTACATTGTTTTCATCTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATATAGGAGAAATATCTGTCTGTATTACATTGTTTTCATCTTCTC  600

seq1  TGGAGTCTTCAGTTGCGGGCAGTATATCTTGAAAGCATGTGAAAGACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTTCAGTTGCGGGCAGTATATCTTGAAAGCATGTGAAAGACCTG  650

seq1  GGAGTATCATCACTACAAGACATCTGTCAATCACCTCTCCTTCTGCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATCATCACTACAAGACATCTGTCAATCACCTCTCCTTCTGCACTG  700

seq1  ACCAAGCATCATGTGAGTTAGTTACTCTGAGGGCTACAATGACCCGTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCATCATGTGAGTTAGTTACTCTGAGGGCTACAATGACCCGTGAC  750

seq1  CACCAGGACTTGAAATTGCAATGCCAGAACAGAACAAATGCATAAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGACTTGAAATTGCAATGCCAGAACAGAACAAATGCATAAAAACT  800

seq1  AGTTATCAACAGATCAATGTATCCTAGACACATCCACACTTAAATGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCAACAGATCAATGTATCCTAGACACATCCACACTTAAATGACAG  850

seq1  GTGATAGAAGTAATCCAAAGACAAGGCCCCACTCCCTGCCCTGCCCCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGAAGTAATCCAAAGACAAGGCCCCACTCCCTGCCCTGCCCCCAC  900

seq1  TCTCAGATCCAAGCCACTTGCTGTCTCCAGGGAG-ACAAACCGAGCTGTC  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTCAGATCCAAGCCACTTGCTGTCTCCAGGGAGAACAAACCGAGCTGTC  950

seq1  CATGGAACTGTACTAAAGAGAGCTGTGTCGGACTCTACAGA-GGTTAGGA  998
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATGGAACTGTACTAAAGAGAGCTGTGTCGGACTCTACAGAGGGTTAGGA  1000

seq1  TTCTCTTCTTGTAAATCTCCCC-TTCACACG-TCTGACAGTTTGTCCTAC  1046
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TTCTCTTCTTGTAAATCTCCCCTTTCACACGTTCTGACAGTTTGTCCTAC  1050

seq1  CATAGAGTAAAGGACAAATTTCAGGAAATGATATAGGCTTGAA-GCCCCG  1095
      |||||||| |||||||||||||||| ||||||||||||||||| ||||||
seq2  CATAGAGTTAAGGACAAATTTCAGGGAATGATATAGGCTTGAAGGCCCCG  1100

seq1  TGGAAACTCTTTAGGAGAAACCAGTGACAG--CCACCACATCACAACGGC  1143
      ||| ||||||| ||||| || |||||||||  | |||||||  |||||||
seq2  TGG-AACTCTTAAGGAG-AATCAGTGACAGGCCAACCACATTCCAACGGC  1148

seq1  AGCTGCAAAGTGT-TAGCCTGGTAGTACAGTGCATCGTGTGAGCGCAACT  1192
      |||||| || ||| |||||||||||| ||||||||    ||||||  |||
seq2  AGCTGCCAAATGTGTAGCCTGGTAGT-CAGTGCATTTGTTGAGCGACACT  1197

seq1  CAGGT-ACGGGTTGAACAT-TCTT  1214
      ||||| |||||||| |||| ||||
seq2  CAGGTAACGGGTTGGACATCTCTT  1221

seq1: chr10_21641469_21641969
seq2: B6Ng01-273G08.g_66_566 (reverse)

seq1  ATAGTCATCGCAGCGACTTCCTTTTCTCTCTCCTTTTCCTCCTCCACCTT  50
      |||||||| |||     |||||||||||||||||||||||||||||||||
seq2  ATAGTCATAGCATTAGTTTCCTTTTCTCTCTCCTTTTCCTCCTCCACCTT  50

seq1  CTCCCCCCTTCCTCTTCTTCATTTCCTCTGCTCAAGACAGGCTAATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCTTCCTCTTCTTCATTTCCTCTGCTCAAGACAGGCTAATTCCA  100

seq1  AAGAAAGGATCAGTCCTACAATTTTAAGAAATAATAAGAACTTTATCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGATCAGTCCTACAATTTTAAGAAATAATAAGAACTTTATCTTC  150

seq1  ATTTCAAAATCCTCATATTAACGAGTCCCTGAGCTCTGCCTGTCACCGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAATCCTCATATTAACGAGTCCCTGAGCTCTGCCTGTCACCGAT  200

seq1  CAGTGGGTGGTATTTTAGTGGGGTCAGAAGGGGACTTTAAATTACTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTGGTATTTTAGTGGGGTCAGAAGGGGACTTTAAATTACTGAGT  250

seq1  TCAAGGCTGAGACTTGTGTGGTGTGTAACACACACAACACACTGATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCTGAGACTTGTGTGGTGTGTAACACACACAACACACTGATTCTG  300

seq1  GGGGTGGGGCTTCCTGTGAGTTCCAACATGGAGGATGGTACAGACATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGCTTCCTGTGAGTTCCAACATGGAGGATGGTACAGACATGTC  350

seq1  TCCCTCCCTTTCCACTCTCTTCCTCCTGGGCCCTCACCAGCCATCCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTTTCCACTCTCTTCCTCCTGGGCCCTCACCAGCCATCCCCCA  400

seq1  GACCAGGCCTGGAGAAATGCAAGGTTAGACCTTGGGAATCTAGAACAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCCTGGAGAAATGCAAGGTTAGACCTTGGGAATCTAGAACAGGA  450

seq1  TGCATGGGAAGGGACTGGGAAATCCCAAAGGCACCGAAAGCTGGGGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGAAGGGACTGGGAAATCCCAAAGGCACCGAAAGCTGGGGAATT  500

seq1  C  501
      |
seq2  C  501