BAC Information

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BAC

Clone NameB6Ng01-273H11
Chromosome10 (Build37)
Map Location 128,730,173 - 128,731,300
singlet/doubletsinglet
Overlap geneLOC544749
Upstream geneIl23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1
Downstream geneOlfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273H11.bB6Ng01-273H11.g
ACCGA075033GA075034
length1,0041,123
definitionB6Ng01-273H11.b B6Ng01-273H11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctactcaaattagggacaagagaaggctatcctctctttctctat
ctattcaatgtagttcttgaagttttcactacaacagaaagacaactaaa
gaagttcaaggtggtacaaattggaaaggaaggagccaaagtattgctat
ttgcagaggatatgatagtatacattattaaccccagaaattctaccaga
gaactcctacagctgataaacacctccaggaaggtagctggatacaaaat
taactaaaatcaaatcaaatcaaataaaaaaaccccagtagccttctttt
atgaaatagataaagtgctgacaaagaaattaggaaacaaaatccttcac
aatagccacaaataatatgaaatattttggtgtcacttcaagcaagtgaa
agacctgtatgacaagaacttcatgtctcagaagaaagaaattgaagaag
atatcagaagatggaaagatatcttccatgtttatggattggtaagatta
acaaagtaaaaatggccatcttaccaaaaataatctacaaattcaatgca
attcccatcaaaatcccaacacaattctttatggaccttgaaataaccat
actcaactttatatggaaacacaacaacaacaacaacaacaacaacaaca
acaacaaaaacaacaacaaaacccaggatagctaaaacaatcctgtgtaa
taaaagaacttctggttagctcatattgttgtttcttctatagggatgca
gaccccttcagcttcttgggtactttctctagctccttcattggggacta
tgcgtttcatccaatagaactaaccagtacccccagagctcatgtctcca
tctgcatatgtagcagaggatggcctagttggcatcagtggggaggagag
gccctttggtcttgtgaagattctaggccacagtataggggaaatgtcat
ggcccaggaagaagggagagggagggttgaaggagcaggggggaaagtga
aaca
gaattcactcattttaaatgaagtgtacataagggagtccacaatttatt
ggtatacaacttaaataaactgtcatgagatattagttattatttttcta
acatttctgtaaaagttatccttattcttgtttctctaataacattattt
tcaaaatgttatatatttaatattaaaccagacttaatgatcttgctttc
tcctaattttcttttatatatatgacttttaatgttgaaaattaatcctg
ttcattattattggggctcattaatctactctattcatatttttctggaa
agaaaataacacatataagtgtgaaaatagtaaaaagaaaagttagtgaa
aataagtctaatcactcattcagtgaattctgtggagtctgataaataga
aaatttaaaaatctcaaaagaattcctgtggtggctcttaacactttcca
agcagtgaaacctatgccaaaccaattctttgctttatttggaagagctg
agatagtcattcactatgtggcaggttgaatgtggtaggtgagttgagtg
gttttcagactaacagcaactcaggtggaatttcaggcacaatacaagcc
tgattcctccttattacttatgcagaaatctttataatacccataagagt
tttaaatctgtataaaaggtaatatccaacctgatatattttcttgaaag
atgatctgattatatgttgtacctgagttatttatttactctttgaatat
ttattgtgggttcactatgtgtgtgcaagaggacctggcacagagaagaa
gaaaaactttagtataatatttggggagattttacattcccttaaggaat
accttaatcatcaattataaaataaacacatttgatgcattctttcatcc
cagcttagagatggagagagatgagtaaagtcatacatatcagatgttag
tttcactttgcaactttctacaggaaaaaaaaaaaatctccgtgaagaaa
ctggaagcaaagaaggagattataatcatagtgttaattaaatagttaga
atctattaagaaattcagattatggctgaagtttggctgaaaggctatat
aagaaaacctgtaatgaaagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128730173_128731300
seq2: B6Ng01-273H11.g_63_1185 (reverse)

seq1  GTTCTTCAATTACAGTGTTTCTTATATAGCCTTTCTGGCAAACCTCAGCC  50
      ||||||  |||||||  |||||||||||||||||| | ||||| |||| |
seq2  GTTCTTTCATTACAGGTTTTCTTATATAGCCTTTCAGCCAAACTTCAG-C  49

seq1  CATTAAATCTGAATTTCTTAAATAGGATCTAAACTATTTAATTAACACTA  100
      |||  |||||||||||||| |||||  ||| |||||||||||||||||||
seq2  CAT--AATCTGAATTTCTT-AATAGATTCT-AACTATTTAATTAACACTA  95

seq1  -GATTATATTCTTCCTTCTTTTGCTTCCCAGTTTCTTCACGGAAGATTTT  149
       ||||||| || |||||| ||||||| ||||||||||||||||   ||||
seq2  TGATTATAATC-TCCTTC-TTTGCTT-CCAGTTTCTTCACGGAGATTTTT  142

seq1  TTTTTTTCCTGTAGAAGTTTGCAAAGTGAAACT-ACATCTGATATGTATG  198
      ||||||||||||||||  ||||||||||||||| ||||||||||||||||
seq2  TTTTTTTCCTGTAGAAAGTTGCAAAGTGAAACTAACATCTGATATGTATG  192

seq1  ACTTTACTCATCTCTCTCCATCTCTAAGCT-GGATG-AAGAATGCATCAA  246
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  ACTTTACTCATCTCTCTCCATCTCTAAGCTGGGATGAAAGAATGCATCAA  242

seq1  ATGTGTTTATTTTATAATTGATTGATTAAGGTATTCCTTAAGGGAATGTA  296
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGTGTTTATTTTATAATTGA-TGATTAAGGTATTCCTTAAGGGAATGTA  291

seq1  AAATCTCCCCAAATATTATACTAAAGTTTTTCTTCTTCTCTGTGCCAGGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCCCCAAATATTATACTAAAGTTTTTCTTCTTCTCTGTGCCAGGT  341

seq1  CCTCTTGCACACACATAGTGAACCCACAATAAATATTCAAAGAGTAAATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCACACACATAGTGAACCCACAATAAATATTCAAAGAGTAAATA  391

seq1  AATAACTCAGGTACAACATATAATCAGATCATCTTTCAAGAAAATATATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCAGGTACAACATATAATCAGATCATCTTTCAAGAAAATATATC  441

seq1  AGGTTGGATATTACCTTTTATACAGATTTAAAACTCTTATGGGTATTATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGATATTACCTTTTATACAGATTTAAAACTCTTATGGGTATTATA  491

seq1  AAGATTTCTGCATAAGTAATAAGGAGGAATCAGGCTTGTATTGTGCCTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCTGCATAAGTAATAAGGAGGAATCAGGCTTGTATTGTGCCTGA  541

seq1  AATTCCACCTGAGTTGCTGTTAGTCTGAAAACCACTCAACTCACCTACCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACCTGAGTTGCTGTTAGTCTGAAAACCACTCAACTCACCTACCA  591

seq1  CATTCAACCTGCCACATAGTGAATGACTATCTCAGCTCTTCCAAATAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACCTGCCACATAGTGAATGACTATCTCAGCTCTTCCAAATAAAG  641

seq1  CAAAGAATTGGTTTGGCATAGGTTTCACTGCTTGGAAAGTGTTAAGAGCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATTGGTTTGGCATAGGTTTCACTGCTTGGAAAGTGTTAAGAGCC  691

seq1  ACCACAGGAATTCTTTTGAGATTTTTAAATTTTCTATTTATCAGACTCCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGAATTCTTTTGAGATTTTTAAATTTTCTATTTATCAGACTCCA  741

seq1  CAGAATTCACTGAATGAGTGATTAGACTTATTTTCACTAACTTTTCTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCACTGAATGAGTGATTAGACTTATTTTCACTAACTTTTCTTTT  791

seq1  TACTATTTTCACACTTATATGTGTTATTTTCTTTCCAGAAAAATATGAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTCACACTTATATGTGTTATTTTCTTTCCAGAAAAATATGAAT  841

seq1  AGAGTAGATTAATGAGCCCCAATAATAATGAACAGGATTAATTTTCAACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGATTAATGAGCCCCAATAATAATGAACAGGATTAATTTTCAACA  891

seq1  TTAAAAGTCATATATATAAAAGAAAATTAGGAGAAAGCAAGATCATTAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCATATATATAAAAGAAAATTAGGAGAAAGCAAGATCATTAAG  941

seq1  TCTGGTTTAATATTAAATATATAACATTTTGAAAATAATGTTATTAGAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTAATATTAAATATATAACATTTTGAAAATAATGTTATTAGAGA  991

seq1  AACAAGAATAAGGATAACTTTTACAGAAATGTTAGAAAAATAATAACTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAATAAGGATAACTTTTACAGAAATGTTAGAAAAATAATAACTAA  1041

seq1  TATCTCATGACAGTTTATTTAAGTTGTATACCAATAAATTGTGGACTCCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATGACAGTTTATTTAAGTTGTATACCAATAAATTGTGGACTCCC  1091

seq1  TTATGTACACTTCATTTAAAATGAGTGAATTC  1128
      ||||||||||||||||||||||||||||||||
seq2  TTATGTACACTTCATTTAAAATGAGTGAATTC  1123