BAC Information

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BAC

Clone NameB6Ng01-274D13
Chromosome10 (Build37)
Map Location 23,184,711 - 23,185,125
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21, Eya4
Downstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274D13.bB6Ng01-274D13.g
ACCGA075581GA075582
length1,153908
definitionB6Ng01-274D13.b B6Ng01-274D13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctaaggaataccaaatggctgagaagcacctaaggatgtt
caacatccttagtcatcagggagttgcaaatcaaaacaacactgagattc
cacgtcacaccaatcagaatgactaagatcaaaaactcaggtgacagcag
atgatggtgaggatgtggagaaagaggaacacttctccattgttggtagg
attgcaaaatggtgcaaccattctggaaatcagtctggcgggtcctcaca
aaattggacataggatcctgagaatccagctataccactcctgggcatat
accccaaagattctccaacatataacaaggtcacatggtccactatgttc
atagcagccttatatataatagccagaagctggaaagaacccagatgtcc
atcaacagaggaatggatacagaaaatgtggtacatttacagaatggggt
actactcagctcttaaaaacaatgaatttatgaaattcctaggcaaatgg
gtggacctggagggcatcatcctgagtgagttaacccaatcacaaaagaa
ctcacatgatatgtacttactgataagtggatattagcccagaaatttag
aatacccaagatacaagttgcaaaacacatgaaactcaagaaaaacgaag
accaaattgtggtcactttgccccttcttagaattgggaacaaaacaccc
atggaaggagttacagagacaaagtttggagctgagacgaaaggatggac
catctagagacttccacactgggggccatcccataatcagcctccaaacg
cagacaccattgcatatgccagcaagattttatatataaaatatataaat
gatatagctgtctcttgtgaggctatgccggtgcctgtcaaacacagaag
tggatgctcacagtcagctattggatggaacacagggcccccaatggaga
agctagagaaagcacccaagagctaaagggatatgcaaccctatagtgga
acacaatatgaactaactagtaccctggtagcagagatgggcctagttgg
gcatcattgaagaagagctcctttggtctgcaacctttaataaggctcag
tacagggaaacaccaggtcaagaagtgggagttggtgtgtgctagggggg
cct
gaattccaggacagctagggctatacagagaaaccctgtctagaaaacac
aaaaacaaaacaaaacaaaaaagaattgtttttcctattctgttttttgt
ttttgtttttgcctttccagatgaatttgagaattgttctttccatgtct
ttgaaggattgtgttgggatgttgatggggattgcattgaatctatagat
tgcctttgataagatgaccatttttactatgttaattctgtctatccatg
agaatggtagatctccctattttttgagatctttttcgatttcattcttg
agagacttgaagttattgtcatataggtctttcacttgttttgttagagt
tacccccaagatattttatattatttgtggctattgtgaagggagttgtt
tccctaatttctttctaagcctatttaacattggtataaaggaagtctac
tgatttgtttgagttaattttatatctggccactttgctgaagttgttta
tcagctggagaagttctctggtagattttttttgttgttgttggtgttgc
ttgtgtcctatcatatcatctgcaaatagtgatacatttgtttcttcttt
gctaacttgtatccacttaatctgtttttgttgtctggttgttctagcta
gcttttagaatagacatggacatccttttcttgtccctgatttcagtggg
atttcttcaagtatgttaccacttaacttgatattggctgttggtttgca
ttaaattgcttttattatttttaggtacaagccatgaattcttgatctct
ccaatgcttttaacatgaaagggtgtttgtattttgtcaagtgctttttc
tacatctaaggagatggtcatgtgatatttttttctttgagtttgtttat
attataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23184711_23185125
seq2: B6Ng01-274D13.g_69_140

seq1  CAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACAAAACAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  AACAAAAACAAAAAGAATAAAGGAAGAAATGAGAAAGAAAACTTTATCAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAATAACTTGCCAGGAGGAAAAAAATGTTACCATAGAATGGATTATGT  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAAGCAATACATATTTTAAGTTGATATGGTATCATCTGCTATGAATGA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGATTACAAAACAGACAAGAAAGAATTGAGTGGAGAGCCGAGCAGTGGTG  250
                                                        
seq2  --------------------------------------------------  0

seq1  GCGCATGCCTTTAATCCCAGCACCTGGGAGTCAGAGGCAGGCGGATTCTG  300
                                                        
seq2  --------------------------------------------------  0

seq1  AGTTCGAGGCCAGCCTGGTCTACAAAGTTCTGAGTTCCAGGACAGCCAGG  350
                                           ||||||||| |||
seq2  -------------------------------------CAGGACAGCTAGG  13

seq1  GCTATACAGAGAAGCCCTGTTTCAAAAAACAAATACAAAAACAAAACAAA  400
      ||||||||||||| |||||| | | |||||    ||||||||||||||||
seq2  GCTATACAGAGAAACCCTGTCT-AGAAAAC----ACAAAAACAAAACAAA  58

seq1  ACAAAAAAAGAATTG  415
      || ||||||||||||
seq2  AC-AAAAAAGAATTG  72