BAC Information

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BAC

Clone NameB6Ng01-274G16
Chromosome10 (Build37)
Map Location 27,023,849 - 27,144,012
singlet/doubletdoublet
Overlap geneLama2
Upstream geneL3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274G16.bB6Ng01-274G16.g
ACCGA075724GA075725
length1,1851,139
definitionB6Ng01-274G16.b B6Ng01-274G16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,142,828 - 27,144,012)(27,023,849 - 27,024,989)
sequence
gaattcagcattttagcaggcagcttccccacaactttgcataaccagta
aatcctagatctaatgtcaatcatttaagggattgttttcatctcacaat
agatgatgtcttcaccttcaaggaaacatcttccagaaacagctgtgtcc
catattgccccttatataaaatataaattttttatatttcaaaattatct
gtaagtattacacagatactgcacatgaattcattggattctaatggtga
agacagtttctctagaatattcctttcagggttcctatgacacagtaggg
cttttaatcacagtgttggtagaatcatcacttggattatccccattagt
gactgttacatccagacctttaagctgtcaagatccctatatggtatagg
atttaccaatctatacattatcttatagctttattgttacttttcatggc
ctataatttccattctagggggatgctaatttttcttaacctaagttgta
tttatatttctgtctaaaatactacacaaaaatgtcactttataatactt
ggacattattattttagactttcagattgcattgcaagcatatctacatc
ataacatataattagatctctgtttctttctctttctctccctctcttca
ctaaattgcatgcaaatttgaaggtaggtcactgctttcactgccctctg
tttgctgagtttactctctcaaattatagcaataatgtcactgccttcct
tccatgactttatgggtttacttcttataaagagaaagcacagaaatgcc
catttaatatgttattatttcaatcacttgtctacataactttgtatttt
ctatgtggggatgctgaggatcccacatttattggatagctcgtcaagtg
cttttttttccaggtattatttgtgtgtttgtgtgtgtgtaatattccat
ttaatactgtggtgtcatgggagatgtacttattcttgatgttaattcag
taggaaaaaaataatctttctaggttgcactaatgctggacccatgattt
gagcacagaatgtgccctgaagtgttatgcctcttttagtgctgtacatg
ttggtctccatgtttgagaatgaagtgtgtttaaataagccatgtttccg
attaagcacattttctttactatgagggtagaaaa

gaattccagattccacaaagctactccagagggtttgctctaaccattca
ccccatggcatggctgcacttacacacacacacacacacacacacacaca
cacacacacacacacacacacacgagtgcacacacatgcacaaagtaata
attgttttgtttgtaaactaggtcttttgatgagaaattgtaacctctga
gtttgtgaggaattgaagctgtatgagtaaggtaaaggtttacctatgtt
tgtccttgtactcgtggtatccagatggcagcaccctgaacagactctca
gagggaaagttgtagcccatgtaggatctgaaactgttcctaaccacctc
aaaacattctgctcccaccaagtcccatttcttcctcattccaaaattaa
tggctgtgtgtattagacttcctattctgaaagaaaacagctgttcgcta
agattaatttctccctacatcaatgtgtgtgcctattctgtttataatga
atctacaataaatttagatttgcataatttttagtggtaggtaaaagaga
attattttacaaggtttttttttttgtacatactaaactattagataata
aagccagactctacattcaaataaaatgtagtatagtaaattgtcttaag
ccctggaaagccttaacttgtagaaccactaacagataactatgcatgag
tagttttagaagtcatcctaaaaaagggaagagtctattgggaagattgc
taacctatagagatggttcattgaatgagatgatttcacacatgtgatgg
atgacctgacttcagagtcatctagtcttatagagtacataaaagtagga
cacagcagttcagcattcctataacaagatgggaggcagagagaagaaat
tccctgggaaactggcaggccaaaccaacctagcaacacagagctgtgaa
aacaaaggtgactgtctcaaagaaggtagaaggctaggactaacactgga
agacatctctgacctatagataacaaattacccatagcacacccacacaa
acccaccccacgaacccacgcactcacgcatacttacacctaccctacgt
cacgcaccttgatcatcttttctttaaagggaaaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_27142828_27144012
seq2: B6Ng01-274G16.b_40_1224 (reverse)

seq1  TTTTCTA-CCTCATAGTTAAGAAAAAATGTGCTAAAACGAAAACAT-GCT  48
      ||||||| ||||||||| |||  |||||||||| || || |||||| |||
seq2  TTTTCTACCCTCATAGTAAAG--AAAATGTGCTTAATCGGAAACATGGCT  48

seq1  TATTTAAACACACTTCATCCTCAAACATGGAGACC-ACATGTACAGCACC  97
      |||||||||||||||||| |||||||||||||||| |||||||||||| |
seq2  TATTTAAACACACTTCATTCTCAAACATGGAGACCAACATGTACAGCA-C  97

seq1  TAAAAGA-GCATAACACTTCAGGGGCACATTCCTGTGCTCAAATCATGGG  146
      ||||||| ||||||||||||| ||||||||| ||||||||||||||||||
seq2  TAAAAGAGGCATAACACTTCA-GGGCACATT-CTGTGCTCAAATCATGGG  145

seq1  TCCAGCATTAGTGCAAACCTAG-AAGATTA-TTTTTTCCTACCTGAATTA  194
      |||||||||||||| ||||||| ||||||| |||||||||| ||||||||
seq2  TCCAGCATTAGTGC-AACCTAGAAAGATTATTTTTTTCCTA-CTGAATTA  193

seq1  ACATCAAGAATAAGTACATCTCCCATGACACCACAGTATTAAATGGAATA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAGAATAAGTACATCTCCCATGACACCACAGTATTAAATGGAATA  243

seq1  TTACACACACACAAACACACAAATAATACCTGG-AAAAAAAGCACTTGAC  293
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTACACACACACAAACACACAAATAATACCTGGAAAAAAAAGCACTTGAC  293

seq1  GAGCTATCCAATAAATGTGGGATCCTCAGCATCCCCACATAGAAAATACA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATCCAATAAATGTGGGATCCTCAGCATCCCCACATAGAAAATACA  343

seq1  AAGTTATGTAGACAAGTGATTGAAATAATAACATATTAAATGGGCATTTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGTAGACAAGTGATTGAAATAATAACATATTAAATGGGCATTTC  393

seq1  TGTGCTTTCTCTTTATAAGAAGTAAACCCATAAAGTCATGGAAGGAAGGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTCTCTTTATAAGAAGTAAACCCATAAAGTCATGGAAGGAAGGC  443

seq1  AGTGACATTATTGCTATAATTTGAGAGAGTAAACTCAGCAAACAGAGGGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATTATTGCTATAATTTGAGAGAGTAAACTCAGCAAACAGAGGGC  493

seq1  AGTGAAAGCAGTGACCTACCTTCAAATTTGCATGCAATTTAGTGAAGAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGCAGTGACCTACCTTCAAATTTGCATGCAATTTAGTGAAGAGA  543

seq1  GGGAGAGAAAGAGAAAGAAACAGAGATCTAATTATATGTTATGATGTAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAAAGAGAAAGAAACAGAGATCTAATTATATGTTATGATGTAGA  593

seq1  TATGCTTGCAATGCAATCTGAAAGTCTAAAATAATAATGTCCAAGTATTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGCAATGCAATCTGAAAGTCTAAAATAATAATGTCCAAGTATTA  643

seq1  TAAAGTGACATTTTTGTGTAGTATTTTAGACAGAAATATAAATACAACTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGACATTTTTGTGTAGTATTTTAGACAGAAATATAAATACAACTT  693

seq1  AGGTTAAGAAAAATTAGCATCCCCCTAGAATGGAAATTATAGGCCATGAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAGAAAAATTAGCATCCCCCTAGAATGGAAATTATAGGCCATGAA  743

seq1  AAGTAACAATAAAGCTATAAGATAATGTATAGATTGGTAAATCCTATACC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACAATAAAGCTATAAGATAATGTATAGATTGGTAAATCCTATACC  793

seq1  ATATAGGGATCTTGACAGCTTAAAGGTCTGGATGTAACAGTCACTAATGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGGATCTTGACAGCTTAAAGGTCTGGATGTAACAGTCACTAATGG  843

seq1  GGATAATCCAAGTGATGATTCTACCAACACTGTGATTAAAAGCCCTACTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATCCAAGTGATGATTCTACCAACACTGTGATTAAAAGCCCTACTG  893

seq1  TGTCATAGGAACCCTGAAAGGAATATTCTAGAGAAACTGTCTTCACCATT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAGGAACCCTGAAAGGAATATTCTAGAGAAACTGTCTTCACCATT  943

seq1  AGAATCCAATGAATTCATGTGCAGTATCTGTGTAATACTTACAGATAATT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCAATGAATTCATGTGCAGTATCTGTGTAATACTTACAGATAATT  993

seq1  TTGAAATATAAAAAATTTATATTTTATATAAGGGGCAATATGGGACACAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATAAAAAATTTATATTTTATATAAGGGGCAATATGGGACACAG  1043

seq1  CTGTTTCTGGAAGATGTTTCCTTGAAGGTGAAGACATCATCTATTGTGAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTGGAAGATGTTTCCTTGAAGGTGAAGACATCATCTATTGTGAG  1093

seq1  ATGAAAACAATCCCTTAAATGATTGACATTAGATCTAGGATTTACTGGTT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAATCCCTTAAATGATTGACATTAGATCTAGGATTTACTGGTT  1143

seq1  ATGCAAAGTTGTGGGGAAGCTGCCTGCTAAAATGCTGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGTTGTGGGGAAGCTGCCTGCTAAAATGCTGAATTC  1185


seq1: chr10_27023849_27024989
seq2: B6Ng01-274G16.g_64_1202

seq1  GAATTCCAGATTCCACAAAGCTACTCCAGAGGGTTTGCTCTAACCATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTCCACAAAGCTACTCCAGAGGGTTTGCTCTAACCATTCA  50

seq1  CCCCATGGCATGGCTGCACTTACACACACACACACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGGCATGGCTGCACTTACACACACACACACACACACACACACACA  100

seq1  CACACACACACACACACACACACGAGTGCACACACATGCACAAAGTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACGAGTGCACACACATGCACAAAGTAATA  150

seq1  ATTGTTTTGTTTGTAAACTAGGTCTTTTGATGAGAAATTGTAACCTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTGTTTGTAAACTAGGTCTTTTGATGAGAAATTGTAACCTCTGA  200

seq1  GTTTGTGAGGAATTGAAGCTGTATGAGTAAGGTAAAGGTTTACCTATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGAGGAATTGAAGCTGTATGAGTAAGGTAAAGGTTTACCTATGTT  250

seq1  TGTCCTTGTACTCGTGGTATCCAGATGGCAGCACCCTGAACAGACTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGTACTCGTGGTATCCAGATGGCAGCACCCTGAACAGACTCTCA  300

seq1  GAGGGAAAGTTGTAGCCCATGTAGGATCTGAAACTGTTCCTAACCACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAGTTGTAGCCCATGTAGGATCTGAAACTGTTCCTAACCACCTC  350

seq1  AAAACATTCTGCTCCCACCAAGTCCCATTTCTTCCTCATTCCAAAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTCTGCTCCCACCAAGTCCCATTTCTTCCTCATTCCAAAATTAA  400

seq1  TGGCTGTGTGTATTAGACTTCCTATTCTGAAAGAAAACAGCTGTTCGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTGTATTAGACTTCCTATTCTGAAAGAAAACAGCTGTTCGCTA  450

seq1  AGATTAATTTCTCCCTACATCAATGTGTGTGCCTATTCTGTTTATAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAATTTCTCCCTACATCAATGTGTGTGCCTATTCTGTTTATAATGA  500

seq1  ATCTACAATAAATTTAGATTTGCATAATTTTTAGTGGTAGGTAAAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAATAAATTTAGATTTGCATAATTTTTAGTGGTAGGTAAAAGAGA  550

seq1  ATTATTTTACAAGGTTTTTTTTTTTGTACATACTAAACTATTAGATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTACAAGGTTTTTTTTTTTGTACATACTAAACTATTAGATAATA  600

seq1  AAGCCAGACTCTACATTCAAATAAAATGTAGTATAGTAAATTGTCTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGACTCTACATTCAAATAAAATGTAGTATAGTAAATTGTCTTAAG  650

seq1  CCCTGGAAAGCCTTAACTTGTAGAACCACTAACAGATAACTATGCATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAAAGCCTTAACTTGTAGAACCACTAACAGATAACTATGCATGAG  700

seq1  TAGTTTTAGAAGTCATCCTAAAAAAGGGAAGAGTCTATTGGGAAGATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAGAAGTCATCCTAAAAAAGGGAAGAGTCTATTGGGAAGATTGC  750

seq1  TAACCTATAGAGATGGTTCATTGAATGAGATGATTTCACACATGTGATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTATAGAGATGGTTCATTGAATGAGATGATTTCACACATGTGATGG  800

seq1  ATGACCTGACTTCAGAGTCATCTAGTCTTATAGAGTACATAAAAGTAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGACTTCAGAGTCATCTAGTCTTATAGAGTACATAAAAGTAGGA  850

seq1  CACAGCAGTTCAGCATTCCTATAACAAGATGGGAGGCAGAGAGAAGAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGTTCAGCATTCCTATAACAAGATGGGAGGCAGAGAGAAGAAAT  900

seq1  TCCCT-GGAAACTGGCAGGCCAAA-CAACCTAGCAAACACAGAGCTGTGA  948
      ||||| |||||||||||||||||| ||||||||| |||||||||||||||
seq2  TCCCTGGGAAACTGGCAGGCCAAACCAACCTAGC-AACACAGAGCTGTGA  949

seq1  AAAACAAAGTGACTGTCTCAAAGAAGGTAGAAGGCTAGGACTAACACTGG  998
      |||  || ||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGGTGACTGTCTCAAAGAAGGTAGAAGGCTAGGACTAACACTGG  999

seq1  AAGACATCTTCTGACCTATAGATACAAAATTACCCATAAGCACCACACAC  1048
      |||||||| |||||||||||||||  ||||||||||| |||| ||| |||
seq2  AAGACATC-TCTGACCTATAGATAACAAATTACCCAT-AGCA-CACCCAC  1046

seq1  ACAAACACACACACACAAACACACACACACACACACACACACACACACAC  1098
      |||||| ||| | ||| ||| ||| ||| ||| || ||  ||||  || |
seq2  ACAAACCCAC-CCCACGAACCCACGCACTCACGCATACTTACACCTACCC  1095

seq1  -AC-ACACACACACACACACACTTTTCTTTAAAAGGGAGAAAGAA  1141
       ||  ||| |||    |    ||||||||| ||||||| ||||||
seq2  TACGTCACGCACCTTGATCATCTTTTCTTT-AAAGGGAAAAAGAA  1139


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