BAC Information

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BAC

Clone NameB6Ng01-274N03
Chromosome10 (Build37)
Map Location 82,742,573 - 82,743,631
singlet/doubletsinglet
Overlap geneSlc41a2
Upstream geneLOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11
Downstream geneD10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274N03.bB6Ng01-274N03.g
ACCGA076020GA076021
length1,0601,149
definitionB6Ng01-274N03.b B6Ng01-274N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatttgttatgacacccagggaaaacccacagagaaactcatc
ttctgactgacaggacacaaacaatgtttatggaagactaacatcttagc
aacgatgtgcattgtgcaggcaatcactagggaaggttacttcattactc
aaaaggatggccccagtgcagtggagagacacgacactgtatacacaaat
ggaacaagccaggcttgtgaggggcaacgacaagggttggtaatgttcaa
gtcagagagatggagcagatagaaccagacacttccatggctttgaggga
taacaagagacagctgggaattccttgacattccaaaggcagacaaaaat
tacaatgtcagtagaaatcttagatcaaaactagacttctgcagaaaatg
tcattgtatagatttttatgtgaatatagaaagtaaaatctttttaaaaa
aagaaaaataacatatggtaaatgtatggtatgccaaggtactttttaaa
tcatgtcaacctaggctatactgaagtcagtcttaataaccaccacttcc
aaaaacagtagagacggattaaattgtcatgattctttaatgtacatatt
acaagtatttaatatatggattataatttccactttacaggcaagtaaag
tctgaggcatagttcgcacgtatgagtagagtagcctatcttagtgaatg
gaatgaagtcgggcaatgatcaagtctgactaactcggcttctaccaagg
taagcagcaaaggcaagaagcagcaggtaagaagcgggacctggagagct
ggcccagtggttcagagcacgcagcgctcctgcagaggacctgagtttgg
ttcccatcgccatgtcagcagtaattgacacttacataactccagctcca
gggaaatcccatgcctacggcgctgctggcacctgcacataccacacaca
cacacacacacacacacacactacacacacacacacacactcatatttaa
aacttatttttctttaaaagctaggtgtagtaagccacaacactttattt
ccagcactca
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaac
agatgctggcatgaatgtgaagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaattggacatagtactcccgg
aggatcccgcaatacctctcctgtgcatatatcgagaagatgccccaact
ggtaagaaggacacatgctccactatgttcatagcagccttatttataat
agccagaagctggaaagaacccagatgcccctcaacagaggaatggatac
agaaaacgtggtacatctacacaatggagtactactcagctattaaaaag
aatgaatttatgaaattcctagccaaatggatggacctggagggcatcat
cctgagtgaggtaacacattcacaaaggaactcacacaatatgtactcac
tgataagtggatattagcccaaaacctaggatacccaagatataagatac
aacttgctaaacacatgaaactcaagaaaaatgaagactgaagtgtggac
actatgcccctccttagaagtgggaacaaaacacccatggaaggagttac
agagacaaagttggagctgagacgaaaggatggaccatgtagagactgcc
atatccaaggatccaccccataatcagcatccaaacgctgacaccattgc
atacactagcaagattttatcgaaaggacccagatgtagctgtctcttgt
gagactatgccggggcctagcaaacacagaagtggatgctcacagtcagc
tattggatggatcacagggctcccaattggaggagctagagaaagtaccc
aaggagctaaagggatctgcaaacctataggtggaacacattataactac
cagtaccccggagctcttgactctagctgcatatatatcaaagatggcct
agttggcatcatggaaagagaagcccatttgacacgcaaactttatatgg
cccagtacaggtaacacccagggcaaaaggggggatgttgctttgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82742573_82743631
seq2: B6Ng01-274N03.b_46_1105

seq1  GAATTCAGATTTGTTATGACACCCAGGGAAAACCCACAGAGAAACTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTTGTTATGACACCCAGGGAAAACCCACAGAGAAACTCATC  50

seq1  TTCTGACTGACAGGACACAAACAATGTTTATGGAAGACTAACATCTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGACAGGACACAAACAATGTTTATGGAAGACTAACATCTTAGC  100

seq1  AACGATGTGCATTGTGCAGGCAATCACTAGGGAAGGTTACTTCATTACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATGTGCATTGTGCAGGCAATCACTAGGGAAGGTTACTTCATTACTC  150

seq1  AAAAGGATGGCCCCAGTGCAGTGGAGAGACACGACACTGTATACACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATGGCCCCAGTGCAGTGGAGAGACACGACACTGTATACACAAAT  200

seq1  GGAACAAGCCAGGCTTGTGAGGGGCAACGACAAGGGTTGGTAATGTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAGCCAGGCTTGTGAGGGGCAACGACAAGGGTTGGTAATGTTCAA  250

seq1  GTCAGAGAGATGGAGCAGATAGAACCAGACACTTCCATGGCTTTGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGAGATGGAGCAGATAGAACCAGACACTTCCATGGCTTTGAGGGA  300

seq1  TAACAAGAGACAGCTGGGAATTCCTTGACATTCCAAAGGCAGACAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGAGACAGCTGGGAATTCCTTGACATTCCAAAGGCAGACAAAAAT  350

seq1  TACAATGTCAGTAGAAATCTTAGATCAAAACTAGACTTCTGCAGAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTCAGTAGAAATCTTAGATCAAAACTAGACTTCTGCAGAAAATG  400

seq1  TCATTGTATAGATTTTTATGTGAATATAGAAAGTAAAATCTTTTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTATAGATTTTTATGTGAATATAGAAAGTAAAATCTTTTTAAAAA  450

seq1  AAGAAAAATAACATATGGTAAATGTATGGTATGCCAAGGTACTTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATAACATATGGTAAATGTATGGTATGCCAAGGTACTTTTTAAA  500

seq1  TCATGTCAACCTAGGCTATACTGAAGTCAGTCTTAATAACCACCACTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCAACCTAGGCTATACTGAAGTCAGTCTTAATAACCACCACTTCC  550

seq1  AAAAACAGTAGAGACGGATTAAATTGTCATGATTCTTTAATGTACATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGTAGAGACGGATTAAATTGTCATGATTCTTTAATGTACATATT  600

seq1  ACAAGTATTTAATATATGGATTATAATTTCCACTTTACAGGCAAGTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATTTAATATATGGATTATAATTTCCACTTTACAGGCAAGTAAAG  650

seq1  TCTGAGGCATAGTTCGCACGTATGAGTAGAGTAGCCTATCTTAGTGAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGCATAGTTCGCACGTATGAGTAGAGTAGCCTATCTTAGTGAATG  700

seq1  GAATGAAGTCGGGCAATGATCAAGTCTGACTAACTCGGCTTCTACCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGTCGGGCAATGATCAAGTCTGACTAACTCGGCTTCTACCAAGG  750

seq1  TAAGCAGCAAAGGCAAGAAGCAGCAGGTAAGAAGCGGGACCTGGAGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCAAAGGCAAGAAGCAGCAGGTAAGAAGCGGGACCTGGAGAGCT  800

seq1  GGCCCAGTGGTTCAGAGCACGCAGCGCTCCTGCAGAGGACCTGAGTTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGTGGTTCAGAGCACGCAGCGCTCCTGCAGAGGACCTGAGTTTGG  850

seq1  TTCCCATCGCCATGTCAGGCAGGTAATTGACACTTACATAACTCCAGCTC  900
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  TTCCCATCGCCATGTCA-GCA-GTAATTGACACTTACATAACTCCAGCTC  898

seq1  CAGGGAAATCCCATGCCTACGGCCGCTGCTGGCACCTGCACATACCACAC  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGGGAAATCCCATGCCTACGG-CGCTGCTGGCACCTGCACATACCACAC  947

seq1  ACACACACACACACACACACACAC-ACACACACACACACACACTCATATT  999
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACTACACACACACACACACACTCATATT  997

seq1  TAAAA-TTATTTTTTTTAAAAAGCTAGGTGTAGTA--GCACACACCTTTA  1046
      ||||| |||||||| || |||||||||||||||||   ||||   |||||
seq2  TAAAACTTATTTTTCTTTAAAAGCTAGGTGTAGTAAGCCACAACACTTTA  1047

seq1  ATTTCAGCACTCA  1059
       || |||||||||
seq2  TTTCCAGCACTCA  1060