BAC Information

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BAC

Clone NameB6Ng01-275D18
Chromosome10 (Build37)
Map Location 67,889,179 - 68,026,919
singlet/doubletdoublet
Overlap gene1700040L02Rik
Upstream geneEgr2, Gm237, LOC100040081, LOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136
Downstream geneEG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, Ank3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275D18.bB6Ng01-275D18.g
ACCGA076330GA076331
length1,1281,132
definitionB6Ng01-275D18.b B6Ng01-275D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,889,179 - 67,890,299)(68,025,776 - 68,026,919)
sequence
gaattcagtttgattcaattcaattcagttaagttcagtttggagcaggt
cagaggcagtcttggtcagaggcagtctttccaagcaaagcaattcaatc
agaagctaagagaagccaatttgaatcagtcagcttggagaagagtttga
gccagaacagctgagttgaaccagtcagccagagttcagaaagtgctaga
aaggtgagtttattcagcagaaagtctcagttgctgaaaaattctaggtt
taggtcaacagatggaggctggaagctaaactcttcaagttcctgtcttg
aagattagattgtactgaggctccaaggttccagacctaggcccaagggt
agttagaacagaggaggaaacactctgggctcagtccaagctgtgtattc
ttacagctagggtacagctctcaccccatcacttcatttgaaagggatgt
ttgcacttacaggcgctggaaaacaaacatggatcctctgcagaagcact
gagtggacttaactgctgagccatttctccagcactggagttttagttat
aaaataactcactatactctctatttataaagtgagtgtattttcagaaa
gttttgaaagtctcttccacagaattgaaaggggtggggggagatcctgg
aatgtgagacatctgcccctctctccaaagggtcggtgccctcatcactg
tcttcttcatggagaagaaaggtactctttaggttgcaagatgagtatat
ttaatttcttttgtgctgtttataaggcagggtcatttcattaatgacaa
aatgtggccaggatcatttttcttcctaattaccttgttttattctgttc
aatattccctcttttaattaattaatagatcttattttctgtagaaccgt
tttagatttgtagacaaattgggcaggtgccccagactcacgtagccttc
ccctacctcccttcttacctccacctagttactactaattattacattgt
cactaaccttacaatagtattgatgcatttgggatcaattaattaactgg
gtggtgggaggatttttcttgagcagcccatttatttacccatagctttc
agtacttcctctggtgggcccaatcccc
gaattcttacccccctttgttctgaaaaagtcatataacatagggattat
tactagtttaaaaatgtattgatatcactcacatacttacagaactaaca
ctagaatcgtggcagcatcttgcattacatacacggatatgtgttcatta
tccatgttcgatggcgttgttagataattacctatgcagaaaatgagaga
tccccctcaagacccagggaagcattcatgtaactgtcttatttatacta
aggtaaacttggcaactgtgagagcctagtgacttggcacccactctgat
gagagagctagttaccatatattttgggggaaaaaaagctaaatacatgt
gtcctttctgggaaaacactcattgaataaagcacaaaccagatggtttt
ctgtgcattttgtgtgtttacctgtacaactctcccttaagaatagtcac
atttcttggtcacattgtttctgtaaccagattttacctctgtccattgt
tcacctacaatacactaatctcacacctgcagctgtagctcagccttgcc
atgttggctccaacctccaaacacagctctcatttgcaaaccagccctcc
tccaaccataattataatctgcctttcatcctagtggtcattgtctctgt
gctcccagacagcctatatgtgtaggtttctctacaagtcagtccatagg
caactcagagattaaaaccaaaatgagcctatgttggtaacctctgcagt
atgcaagatacagccacatttcttataatttcatgccatgatttaggtac
tgggagaaataatatcttctcttttcttacatagagaaataatatcttac
atggagaaataatatcttctcttttctaattgattctctatttgaatgtt
gtccttctgagactgtatagatcatgataactgtggtcactctaccctac
tgcggtcttcaaattacataggtgcaatcattagatgacccttttagagt
ttggctatgggaaagaaacaaacaattgtttacttggtgagcttcgatcg
agaaagctctgtatcttatggaacaggcttgaggagcatgcagaatgcaa
agagacagaaatgggatgtagccaggaagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67889179_67890299
seq2: B6Ng01-275D18.b_41_1168

seq1  GAATTCAGTTTGATTCAATTCAATTCAGTTAAGTTCAGTTTGGAGCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTGATTCAATTCAATTCAGTTAAGTTCAGTTTGGAGCAGGT  50

seq1  CAGAGGCAGTCTTGGTCAGAGGCAGTCTTTCCAAGCAAAGCAATTCAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGTCTTGGTCAGAGGCAGTCTTTCCAAGCAAAGCAATTCAATC  100

seq1  AGAAGCTAAGAGAAGCCAATTTGAATCAGTCAGCTTGGAGAAGAGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTAAGAGAAGCCAATTTGAATCAGTCAGCTTGGAGAAGAGTTTGA  150

seq1  GCCAGAACAGCTGAGTTGAACCAGTCAGCCAGAGTTCAGAAAGTGCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACAGCTGAGTTGAACCAGTCAGCCAGAGTTCAGAAAGTGCTAGA  200

seq1  AAGGTGAGTTTATTCAGCAGAAAGTCTCAGTTGCTGAAAAATTCTAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGTTTATTCAGCAGAAAGTCTCAGTTGCTGAAAAATTCTAGGTT  250

seq1  TAGGTCAACAGATGGAGGCTGGAAGCTAAACTCTTCAAGTTCCTGTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAACAGATGGAGGCTGGAAGCTAAACTCTTCAAGTTCCTGTCTTG  300

seq1  AAGATTAGATTGTACTGAGGCTCCAAGGTTCCAGACCTAGGCCCAAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAGATTGTACTGAGGCTCCAAGGTTCCAGACCTAGGCCCAAGGGT  350

seq1  AGTTAGAACAGAGGAGGAAACACTCTGGGCTCAGTCCAAGCTGTGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAACAGAGGAGGAAACACTCTGGGCTCAGTCCAAGCTGTGTATTC  400

seq1  TTACAGCTAGGGTACAGCTCTCACCCCATCACTTCATTTGAAAGGGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTAGGGTACAGCTCTCACCCCATCACTTCATTTGAAAGGGATGT  450

seq1  TTGCACTTACAGGCGCTGGAAAACAAACATGGATCCTCTGCAGAAGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTTACAGGCGCTGGAAAACAAACATGGATCCTCTGCAGAAGCACT  500

seq1  GAGTGGACTTAACTGCTGAGCCATTTCTCCAGCACTGGAGTTTTAGTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGACTTAACTGCTGAGCCATTTCTCCAGCACTGGAGTTTTAGTTAT  550

seq1  AAAATAACTCACTATACTCTCTATTTATAAAGTGAGTGTATTTTCAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTCACTATACTCTCTATTTATAAAGTGAGTGTATTTTCAGAAA  600

seq1  GTTTTGAAAGTCTCTTCCACAGAATTGAAAGGGGTGGGGGGAGATCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAAGTCTCTTCCACAGAATTGAAAGGGGTGGGGGGAGATCCTGG  650

seq1  AATGTGAGACATCTGCCCCTCTCTCCAAAGGGTCGGTGCCCTCATCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGACATCTGCCCCTCTCTCCAAAGGGTCGGTGCCCTCATCACTG  700

seq1  TCTTCTTCATGGAGAAGAAAGGTACTCTTTAGGTTGCAAGATGAGTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCATGGAGAAGAAAGGTACTCTTTAGGTTGCAAGATGAGTATAT  750

seq1  TTAATTTCTTTTGTGCTGTTTATAAGGCAGGGTCATTTCATTAATGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCTTTTGTGCTGTTTATAAGGCAGGGTCATTTCATTAATGACAA  800

seq1  AATGTGGCCAGGATCATTTTTCTTCCTAATTACCTTGTTTTATTCTGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCCAGGATCATTTTTCTTCCTAATTACCTTGTTTTATTCTGTTC  850

seq1  AATATTCCCTCTTTTAATTAATTAATAGATCTTATTTTCTGTAGAACCGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCCTCTTTTAATTAATTAATAGATCTTATTTTCTGTAGAACCGT  900

seq1  TTTAGATTTGTAGACAAATTGGGCAGGTGCCCCAGACTCACGTAGCCTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATTTGTAGACAAATTGGGCAGGTGCCCCAGACTCACGTAGCCTTC  950

seq1  CCCTACCTCCCTTCTTACCTCCCACCTAGTTACTACTAATTATTAACATT  1000
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  CCCTACCTCCCTTCTTACCT-CCACCTAGTTACTACTAATTATT-ACATT  998

seq1  GTCACTAACCTTACAATAGTA-TGATGCATTT-GGATCAATTAATTAACT  1048
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  GTCACTAACCTTACAATAGTATTGATGCATTTGGGATCAATTAATTAACT  1048

seq1  -GGTGGT-GGAGGA-TTTTCTTGAGCAAGCCCA-TTATTTACCCATAGC-  1093
       |||||| |||||| ||||||||||| |||||| ||||||||||||||| 
seq2  GGGTGGTGGGAGGATTTTTCTTGAGC-AGCCCATTTATTTACCCATAGCT  1097

seq1  TTCAGTACTTCCTCT-GTGG--CCCATCCCC  1121
      ||||||||||||||| ||||  || ||||||
seq2  TTCAGTACTTCCTCTGGTGGGCCCAATCCCC  1128

seq1: chr10_68025776_68026919
seq2: B6Ng01-275D18.g_51_1182 (reverse)

seq1  GCTCTCTCCTGGCCTACCATCCCCTTTTCTGTCTCTTCTGCATTCTGGCA  50
      ||||| |||||| ||| ||| ||| |||||||||||| |||||||| |||
seq2  GCTCT-TCCTGG-CTA-CAT-CCCATTTCTGTCTCTT-TGCATTCT-GCA  44

seq1  TGCTTCCTTCAAGCCTTGTCCATAAGATACAGAGCTTTTCCTCGATCG-A  99
      ||||  | ||||||||  ||||||||||||||||||||  |||||||| |
seq2  TGCT--CCTCAAGCCTGTTCCATAAGATACAGAGCTTT--CTCGATCGAA  90

seq1  GCTCACCAAGTAAACAATTTTGTTTGTTTTCTTTCCATAGCCAAACTTCT  149
      |||||||||||||||||  ||||||||||  || |||||||||||||   
seq2  GCTCACCAAGTAAACAA--TTGTTTGTTTCTTTCCCATAGCCAAACT--C  136

seq1  TAAAAGGGTCATCTAATGATTGCACCTATGTAATTTGAAGACCGCAGTAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGTCATCTAATGATTGCACCTATGTAATTTGAAGACCGCAGTAG  186

seq1  GGTAGAGTGACCACAGTTATCATGATCTATACAGTCTCAGAAGGACAACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGTGACCACAGTTATCATGATCTATACAGTCTCAGAAGGACAACA  236

seq1  TTCAAATAGAGAATCAATTAGAAAAGAGAAGATATTATTTCTCCATGTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATAGAGAATCAATTAGAAAAGAGAAGATATTATTTCTCCATGTAA  286

seq1  GATATTATTTCTCTATGTAAGAAAAGAGAAGATATTATTTCTCCCAGTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATTTCTCTATGTAAGAAAAGAGAAGATATTATTTCTCCCAGTAC  336

seq1  CTAAATCATGGCATGAAATTATAAGAAATGTGGCTGTATCTTGCATACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCATGGCATGAAATTATAAGAAATGTGGCTGTATCTTGCATACTG  386

seq1  CAGAGGTTACCAACATAGGCTCATTTTGGTTTTAATCTCTGAGTTGCCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTTACCAACATAGGCTCATTTTGGTTTTAATCTCTGAGTTGCCTA  436

seq1  TGGACTGACTTGTAGAGAAACCTACACATATAGGCTGTCTGGGAGCACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGACTTGTAGAGAAACCTACACATATAGGCTGTCTGGGAGCACAG  486

seq1  AGACAATGACCACTAGGATGAAAGGCAGATTATAATTATGGTTGGAGGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGACCACTAGGATGAAAGGCAGATTATAATTATGGTTGGAGGAG  536

seq1  GGCTGGTTTGCAAATGAGAGCTGTGTTTGGAGGTTGGAGCCAACATGGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTTGCAAATGAGAGCTGTGTTTGGAGGTTGGAGCCAACATGGCA  586

seq1  AGGCTGAGCTACAGCTGCAGGTGTGAGATTAGTGTATTGTAGGTGAACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGCTACAGCTGCAGGTGTGAGATTAGTGTATTGTAGGTGAACAA  636

seq1  TGGACAGAGGTAAAATCTGGTTACAGAAACAATGTGACCAAGAAATGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGAGGTAAAATCTGGTTACAGAAACAATGTGACCAAGAAATGTGA  686

seq1  CTATTCTTAAGGGAGAGTTGTACAGGTAAACACACAAAATGCACAGAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTAAGGGAGAGTTGTACAGGTAAACACACAAAATGCACAGAAAA  736

seq1  CCATCTGGTTTGTGCTTTATTCAATGAGTGTTTTCCCAGAAAGGACACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGGTTTGTGCTTTATTCAATGAGTGTTTTCCCAGAAAGGACACAT  786

seq1  GTATTTAGCTTTTTTTCCCCCAAAATATATGGTAACTAGCTCTCTCATCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAGCTTTTTTTCCCCCAAAATATATGGTAACTAGCTCTCTCATCA  836

seq1  GAGTGGGTGCCAAGTCACTAGGCTCTCACAGTTGCCAAGTTTACCTTAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGCCAAGTCACTAGGCTCTCACAGTTGCCAAGTTTACCTTAGT  886

seq1  ATAAATAAGACAGTTACATGAATGCTTCCCTGGGTCTTGAGGGGGATCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGACAGTTACATGAATGCTTCCCTGGGTCTTGAGGGGGATCTC  936

seq1  TCATTTTCTGCATAGGTAATTATCTAACAACGCCATCGAACATGGATAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTGCATAGGTAATTATCTAACAACGCCATCGAACATGGATAAT  986

seq1  GAACACATATCCGTGTATGTAATGCAAGATGCTGCCACGATTCTAGTGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACATATCCGTGTATGTAATGCAAGATGCTGCCACGATTCTAGTGTT  1036

seq1  AGTTCTGTAAGTATGTGAGTGATATCAATACATTTTTAAACTAGTAATAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTAAGTATGTGAGTGATATCAATACATTTTTAAACTAGTAATAA  1086

seq1  TCCCTATGTTATATGACTTTTTCAGAAC-AACTGAGGTAAGAATTC  1144
      |||||||||||||||||||||||||||| ||  | |||||||||||
seq2  TCCCTATGTTATATGACTTTTTCAGAACAAAGGGGGGTAAGAATTC  1132