BAC Information

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BAC

Clone NameB6Ng01-275P08
Chromosome10 (Build37)
Map Location 100,657,764 - 100,802,235
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275P08.bB6Ng01-275P08.g
ACCGA076855GA076856
length1,1341,074
definitionB6Ng01-275P08.b B6Ng01-275P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,801,086 - 100,802,235)(100,657,764 - 100,658,834)
sequence
gaattctgtacaaaacactaaagtaacgattagaagagggggtacaggtt
ttatttatcaacacgtaaatgttaatgggatagctgtgtgtactgtacgt
gcttgtgtgtgtttgggatgacctgcccatgtgtggacagacaaacacta
aaggaaaatgaaaggtgctgtgctctatcactttctgcaatatccctctg
agtctggagctgagctgacatgcagcaattctcaatgatcctcttgtctc
caccaccaatagtcttggactacaggttcaagggtagccacatctggctt
tgttttgtttttctttttcaatcagttctagggatccaatctcagatccc
atgcttctatatgaagacctcatatacactgagttgtctctcctcattcc
cctaatttttctttgttatctagatagaactccaaaattaagctacctag
tataaaagtatagattagtagaatgattatttacaattgctttaaaatag
aaaaaatatatatgctaatctaacagccatgtaccaactctgagaaaata
gaaactgtgtgaagaggcaccgcattctgttagcatcactatatatgaca
tacaaagaaatggacaagaaatactgagctaagcaaggcagaaggagaca
gatgttaatttctacccgaaactaataacttggctttggaaggcagcatc
atttcatagcacttcaacataaaatatgtcacagatgattgcacacttca
tttaaaatcagaactgaagaaaaggagaaaaacaatgaattcacaacctg
acaggaaaggaagagcaggaggacaaagcaaagctgttgttcagaaatta
cacttaaggcaaggcatccagcattggaaattgattatatgccctggggt
tgcttcagatataaaacatgttttcccttcctcctaggatgaaagggaga
tgatcacatgagagtttctgacagtccgtgaaactaaataaaggaatgtt
tctcggcagctgtttttccatgagatgatgaagatacaggattgagatat
ctatatagagtcaaaggtgtgaacgtccgtttatgtgctcacattctgta
gagaaaagaaagaaatctttactggatttggcat
gaattctttttaagatagtgacttccccaaaagctgtatctaggattctt
agattgttcctttaggaaggtcttgattgtgcataaaaaaaaagaaaaaa
attaagttcatgtacatgtcacaaaatgacacaatgggatttaataaaat
ttctacacattttaaaaggttgtatccttatattgaggtccttaatccac
ttggacttgagctttgtgtaaggtgacaaatatgggtctattttcacttt
ttacatacagactgccagttagaccagcaccatttattgaagatgctttt
tttgggggtggggggtttcgagacagggtttcctctgtgtagccctggct
gtcctggaactcactttgtagaccaggctggcctcgaactcagaaatcct
cctgcctctgcctcccgagtgctgggattaaaggcgtatgccaccacgcc
cggctgaagatgcttcttttatccaatgtatatttttggttctttgacaa
aaatcaagtctccgtaattgtgtggcattatttctgggtgttcaattcta
ttccattcatcaacctgtctgtctatgtaccaataccatgcagtttttat
cactgttactctgtagtacagcttgaggtttgggatggtgattcccccag
aagttctttttattgttgagaatagtttttgctatcctgggttttttgtt
attccacatgaatttgcaaatcctggatatatagagaatgctataaatat
ccaatttaggcctggggagaaaaagaatttcttttgtgatccttgttaca
gaaaaacaaatagagattgaaacattgaactgtgttaatattgaaaaaaa
atctgttcattcaaaacaagagactcagcagatagaaatggccatcaaaa
ggtggataggagtatatacatataagcatagacatataatatgagattat
tggaaataagattattttatttactgtaattatgagaaatttatgatctt
gacatccaattaaaataaacatggtagtttataaatatttacactaattt
ttcattatgcatatgttttacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100801086_100802235
seq2: B6Ng01-275P08.b_49_1182 (reverse)

seq1  ATGCCAAATCCAGTAAAAGAATTTTCTTTTCTATTCTTCTTACAGAAATG  50
      |||||||||||||| |||||  |||| ||||| ||||   ||||| ||||
seq2  ATGCCAAATCCAGT-AAAGA--TTTC-TTTCTTTTCT--CTACAG-AATG  43

seq1  TGAAGCCACATTAAAAGGGAACGTTCACACCTTTGACTCTATATAGATAT  100
      |||   |||||  ||| || ||||||||||||||||||||||||||||||
seq2  TGA--GCACAT--AAACGG-ACGTTCACACCTTTGACTCTATATAGATAT  88

seq1  CCTCAATCCTGTAATCTTCAATTCATTCTTCATGG-AAAACAGCTGCCGA  149
       ||||||||||| |||||||  ||||   |||||| ||||||||||||||
seq2  -CTCAATCCTGT-ATCTTCA--TCAT--CTCATGGAAAAACAGCTGCCGA  132

seq1  GAAACATTTCCTTATTTAGTTTCACGGACTGTCAGAAACTCTCATGTGAT  199
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTCCTTTATTTAGTTTCACGGACTGTCAGAAACTCTCATGTGAT  182

seq1  CATCTCCCTTTCATCCTAGGAGGAA-GGAAAACATGTTTTAATATCTGAA  248
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  CATCTCCCTTTCATCCTAGGAGGAAGGGAAAACATGTTTT-ATATCTGAA  231

seq1  GCAA-CCCAGGGCATATAATCAATTTCCAATGCTGGATGCCTTGCCTTAA  297
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCCAGGGCATATAATCAATTTCCAATGCTGGATGCCTTGCCTTAA  281

seq1  GTGTAATTTCTGAACAACAGCTTTGCTTTGTCCTCCTGCTCTTCCTTTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTTCTGAACAACAGCTTTGCTTTGTCCTCCTGCTCTTCCTTTCC  331

seq1  TGTCAGGTTGTGAATTCATTGTTTTTCTCCTTTTCTTCAGTTCTGATTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGTTGTGAATTCATTGTTTTTCTCCTTTTCTTCAGTTCTGATTTT  381

seq1  AAATGAAGTGTGCAATCATCTGTGACATATTTTATGTTGAAGTGCTATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGTGTGCAATCATCTGTGACATATTTTATGTTGAAGTGCTATGA  431

seq1  AATGATGCTGCCTTCCAAAGCCAAGTTATTAGTTTCGGGTAGAAATTAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCTGCCTTCCAAAGCCAAGTTATTAGTTTCGGGTAGAAATTAAC  481

seq1  ATCTGTCTCCTTCTGCCTTGCTTAGCTCAGTATTTCTTGTCCATTTCTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCTCCTTCTGCCTTGCTTAGCTCAGTATTTCTTGTCCATTTCTTT  531

seq1  GTATGTCATATATAGTGATGCTAACAGAATGCGGTGCCTCTTCACACAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCATATATAGTGATGCTAACAGAATGCGGTGCCTCTTCACACAGT  581

seq1  TTCTATTTTCTCAGAGTTGGTACATGGCTGTTAGATTAGCATATATATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTCTCAGAGTTGGTACATGGCTGTTAGATTAGCATATATATTT  631

seq1  TTTCTATTTTAAAGCAATTGTAAATAATCATTCTACTAATCTATACTTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTAAAGCAATTGTAAATAATCATTCTACTAATCTATACTTTT  681

seq1  ATACTAGGTAGCTTAATTTTGGAGTTCTATCTAGATAACAAAGAAAAATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGGTAGCTTAATTTTGGAGTTCTATCTAGATAACAAAGAAAAATT  731

seq1  AGGGGAATGAGGAGAGACAACTCAGTGTATATGAGGTCTTCATATAGAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATGAGGAGAGACAACTCAGTGTATATGAGGTCTTCATATAGAAG  781

seq1  CATGGGATCTGAGATTGGATCCCTAGAACTGATTGAAAAAGAAAAACAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGATCTGAGATTGGATCCCTAGAACTGATTGAAAAAGAAAAACAAA  831

seq1  ACAAAGCCAGATGTGGCTACCCTTGAACCTGTAGTCCAAGACTATTGGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCAGATGTGGCTACCCTTGAACCTGTAGTCCAAGACTATTGGTG  881

seq1  GTGGAGACAAGAGGATCATTGAGAATTGCTGCATGTCAGCTCAGCTCCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACAAGAGGATCATTGAGAATTGCTGCATGTCAGCTCAGCTCCAG  931

seq1  ACTCAGAGGGATATTGCAGAAAGTGATAGAGCACAGCACCTTTCATTTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGGGATATTGCAGAAAGTGATAGAGCACAGCACCTTTCATTTTC  981

seq1  CTTTAGTGTTTGTCTGTCCACACATGGGCAGGTCATCCCAAACACACACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTGTTTGTCTGTCCACACATGGGCAGGTCATCCCAAACACACACA  1031

seq1  AGCACGTACAGTACACACAGCTATCCCATTAACATTTACGTGTTGATAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGTACAGTACACACAGCTATCCCATTAACATTTACGTGTTGATAAA  1081

seq1  TAAAACCTGTACCCCCTCTTCTAATCGTTACTTTAGTGTTTTGTACAGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTGTACCCCCTCTTCTAATCGTTACTTTAGTGTTTTGTACAGAA  1131

seq1  TTC  1150
      |||
seq2  TTC  1134

seq1: chr10_100657764_100658834
seq2: B6Ng01-275P08.g_69_1142

seq1  GAATTCTTTTTAAGATAGTGACTTCCCCAAAAGCTGTATCTAGGATTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAAGATAGTGACTTCCCCAAAAGCTGTATCTAGGATTCTT  50

seq1  AGATTGTTCCTTTAGGAAGGTCTTGATTGTGCATAAAAAAAAAGAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTTCCTTTAGGAAGGTCTTGATTGTGCATAAAAAAAAAGAAAAAA  100

seq1  ATTAAGTTCATGTACATGTCACAAAATGACACAATGGGATTTAATAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTCATGTACATGTCACAAAATGACACAATGGGATTTAATAAAAT  150

seq1  TTCTACACATTTTAAAAGGTTGTATCCTTATATTGAGGTCCTTAATCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACACATTTTAAAAGGTTGTATCCTTATATTGAGGTCCTTAATCCAC  200

seq1  TTGGACTTGAGCTTTGTGTAAGGTGACAAATATGGGTCTATTTTCACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTGAGCTTTGTGTAAGGTGACAAATATGGGTCTATTTTCACTTT  250

seq1  TTACATACAGACTGCCAGTTAGACCAGCACCATTTATTGAAGATGCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATACAGACTGCCAGTTAGACCAGCACCATTTATTGAAGATGCTTTT  300

seq1  TTTGGGGGTGGGGGGTTTCGAGACAGGGTTTCCTCTGTGTAGCCCTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGTGGGGGGTTTCGAGACAGGGTTTCCTCTGTGTAGCCCTGGCT  350

seq1  GTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCT  400

seq1  CCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTATGCCACCACGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTATGCCACCACGCC  450

seq1  CGGCTGAAGATGCTTCTTTTATCCAATGTATATTTTTGGTTCTTTGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGAAGATGCTTCTTTTATCCAATGTATATTTTTGGTTCTTTGACAA  500

seq1  AAATCAAGTCTCCGTAATTGTGTGGCATTATTTCTGGGTGTTCAATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGTCTCCGTAATTGTGTGGCATTATTTCTGGGTGTTCAATTCTA  550

seq1  TTCCATTCATCAACCTGTCTGTCTATGTACCAATACCATGCAGTTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCATCAACCTGTCTGTCTATGTACCAATACCATGCAGTTTTTAT  600

seq1  CACTGTTACTCTGTAGTACAGCTTGAGGTTTGGGATGGTGATTCCCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTACTCTGTAGTACAGCTTGAGGTTTGGGATGGTGATTCCCCCAG  650

seq1  AAGTTC-TTTTATTGTTGAGAATAGTTTTTGCTATCCTGGGTTTTTTGTT  699
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTTTTATTGTTGAGAATAGTTTTTGCTATCCTGGGTTTTTTGTT  700

seq1  ATTCCACATGAATTTGC-AATCCTGGATATATAGAGAATGCTATAAATAT  748
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTCCACATGAATTTGCAAATCCTGGATATATAGAGAATGCTATAAATAT  750

seq1  CCAATTTAGGCCTGGGGAGAAAAAGAATTTC-TTTGTGATCCTTGTTACA  797
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCAATTTAGGCCTGGGGAGAAAAAGAATTTCTTTTGTGATCCTTGTTACA  800

seq1  G-AAAACAAATAGAGATTGAAACATTGAACTGTGTTAATATTGAAAAAAA  846
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAAATAGAGATTGAAACATTGAACTGTGTTAATATTGAAAAAAA  850

seq1  ATCTGTTCATTCAAAACAAGAGACTCAGCAGAATAGAAAATGGCATCAAA  896
      ||||||||||||||||||||||||||||||| |||||||  | |||||||
seq2  ATCTGTTCATTCAAAACAAGAGACTCAGCAG-ATAGAAATGGCCATCAAA  899

seq1  A-GTTGATA-GAGTATATACAATATAAGCATAGACATATAATATGAGATT  944
      | || |||| |||||||||| |||||||||||||||||||||||||||||
seq2  AGGTGGATAGGAGTATATAC-ATATAAGCATAGACATATAATATGAGATT  948

seq1  ATTTGAAATAAGA-TATTTATTTAACTGTAAATATGAGAAATTTATTGAT  993
      ||| ||||||||| |||||  || ||||||| ||||||||||||| ||||
seq2  ATTGGAAATAAGATTATTTTATTTACTGTAATTATGAGAAATTTA-TGAT  997

seq1  CTTGACATACAAATTAAAATAAACATTGTAGTTTAAAAATATTTAAAATT  1043
      |||||||| | ||||||||||||||| |||||||| ||||||||| | | 
seq2  CTTGACAT-CCAATTAAAATAAACATGGTAGTTTATAAATATTTACACTA  1046

seq1  ATTTTTCATTATGCATATGTTTCACTTT  1071
      |||||||||||||||||||||| |||||
seq2  ATTTTTCATTATGCATATGTTTTACTTT  1074