BAC Information

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BAC

Clone NameB6Ng01-276C20
Chromosome10 (Build37)
Map Location 22,574,182 - 22,742,715
singlet/doubletdoublet
Overlap genenone
Upstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
Downstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276C20.bB6Ng01-276C20.g
ACCGA077022GA077023
length1,1381,103
definitionB6Ng01-276C20.b B6Ng01-276C20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,741,596 - 22,742,715)(22,574,182 - 22,575,293)
sequence
gaattcaaataaatgagagaagaaaagagagagaaaggaggaatggaagg
aagaagaaatgaaggaatgagagaaggaagggaagagaaggaagaaagga
aaagagagggaaatagggagggagggagggaaaacagaaggggaagaaac
gagaaaatgcagcaatactaaaactaacatcgatcaaatacttagtgtta
ttattatcaattgcaatactctagaactaaatgtttacatactgactcat
agtagcccagtggtgtccttcccacctctgttggtcagcaaaagaggaga
agcttgtaaaatccccagtcttagtggcagagtttgatcataggaatcct
ctcttcagaatctgaacatataaaaaataaataaacaaataaaaataaaa
taaacaaaaagaaccctacattttgtgactgtctgtaagaacaaaaacag
caggatgtagccgaataaggtaaagaagtagagcttgtccactaaacatc
tcagtcagtaaatatttactgagctgttgaagatgtagcttctgcagtca
catcctttgctgggcccagtggaaatgaaagaaatacactgaaggataac
agataccagggctgtgtgagaacttcaggccacgcagggctgagagacag
acacttgtagatagtcactacctttctctacagagatagaggtgctgcag
gagtttcttccagaagccatttcttggctgcccccagagaactgactctg
gtagcccttggagaggacagattaagaactgaggactgtgcggtaaatgg
taaaggtgtgtattagacggggcatgcgagctggtgatgtccagatataa
agccttagcacttggggttagaaggatggcttggttggttaagagcatgc
acttgctgcacatgttcagcctggtacatgcactggttaagagtccagca
tgcacaccaccaatctgtacttctagttccaagggacctgtacttggcta
gctttggtgccaaattgacacagctggaggttatcacaaaagatagggag
ccttcctgttgacggaattgcttccatggagattctcactggtaaggcca
tttttcctcattagtggatcaaggggttaaggctcctt
gaattcaaaatcacttaaggacacaaagcaaaagtgtttatgggcagcaa
taaggatctctgcacagtgactttagaatgtcgcagctctcccccctcat
cttagatccctggggaatgagggcagagcaagggagcctaaaccgcagcg
taatcagggagcacagatgggtagtatggcttatcagcctcagcacgtgt
gggcagtgagggaaaaggagcagcggaggcagtggccttggctcggtggg
ctttctggggacctgctttatttacttgtttattttggtatccctgagaa
tggaacccagagtctcatgtgtcactcaagcttgacaaacgctctaccca
gccagcaagggggcaatgctagatagcagggggtgatgctccctccagag
aggccttttctctggcgtcccacccctgaacactcatttacaccatcact
aacatatcaactatgcctctgatagaaaactctgaaacaaaactcatatt
tcatgtgaatatgcgctgctgaaactcagctgaggtttgaagaggatgtg
ttctgctgtgacatcatttccggtccgtgccttctgaaaacaaacagtct
ggatttgttaggggttgaatgtcaaatgttccttacagactcctgcgttt
gatgacttgtttcccagagtgtggcactatttgggaaagttatggactct
tctaaaggtagagtctcagtggattgagtggggccttgggatagccccat
gtttctacagtccagttcagcttcctgatcgcgttctggttcctggttgc
aaatacaaagtcattaactactgcacactctcttgacctgagagccaaaa
gtaagtgtttcctcccttaatttgatctttgttggtatttgatgacagca
atgagacaagccagtacactcacctactcatctctattaaatgaccactt
cctgggtggcagtggaattccctggtagatgctagcatcataattcaggt
gaacgatgaacattttattcagaggcaaaaagtagtcacgtgagacttaa
aggacccagagaggttacttgcataccacgaatgcgagaagtctcaataa
ttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22741596_22742715
seq2: B6Ng01-276C20.b_47_1184 (reverse)

seq1  AAGGGGCCTTTACCCCTTGAT-CACTAATTGAG--AAAAT-GCCTTA-CA  45
      |||| ||||| |||||||||| |||||| ||||  ||||| |||||| ||
seq2  AAGGAGCCTTAACCCCTTGATCCACTAA-TGAGGAAAAATGGCCTTACCA  49

seq1  GTG-GAATCT-CATGGAGGCATTTCC-TCAACTG--AAGCT-CCTTTC-T  88
      ||| |||||| |||||| ||| |||| ||||| |  | ||| ||| || |
seq2  GTGAGAATCTCCATGGAAGCAATTCCGTCAACAGGAAGGCTCCCTATCTT  99

seq1  CTGTGATAA-CTCCAGCTGTGTCAATTTGACA-CAAAGCTAGCC-AGTAC  135
       |||||||| ||||||||||||||||||| || ||||||||||| |||||
seq2  TTGTGATAACCTCCAGCTGTGTCAATTTGGCACCAAAGCTAGCCAAGTAC  149

seq1  AGGTCCCTTGGAACTGGAGTTACAGA-TGGTTGTGTGCATGCTGGACTCT  184
      ||||||||||||||| ||  |||||| |||| ||||||||||||||||||
seq2  AGGTCCCTTGGAACTAGAAGTACAGATTGGTGGTGTGCATGCTGGACTCT  199

seq1  TAACCAGTGCATGTACCAGGCTGAACATGTGCAGC-AGTGCATGCTCTTA  233
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAACCAGTGCATGTACCAGGCTGAACATGTGCAGCAAGTGCATGCTCTTA  249

seq1  ACC-ACCAAGCCATCCTTCTAACCCCAAGTGCTAAGGCTTTATATCTGGA  282
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAAGCCATCCTTCTAACCCCAAGTGCTAAGGCTTTATATCTGGA  299

seq1  CATCACCAGCTCGCATG-CCCGTCTAATACACACCTTTACCATTTACCGC  331
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATCACCAGCTCGCATGCCCCGTCTAATACACACCTTTACCATTTACCGC  349

seq1  ACAGTCCTCAGTTCTTAATCTGTCCTCTCCAAGGGCTACCAGAGTCAGTT  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTCAGTTCTTAATCTGTCCTCTCCAAGGGCTACCAGAGTCAGTT  399

seq1  CTCTGGGGGCAGCCAAGAAATGGCTTCTGGAAGAAACTCCTGCAGCACCT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGGCAGCCAAGAAATGGCTTCTGGAAGAAACTCCTGCAGCACCT  449

seq1  CTATCTCTGTAGAGAAAGGTAGTGACTATCTACAAGTGTCTGTCTCTCAG  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTGTAGAGAAAGGTAGTGACTATCTACAAGTGTCTGTCTCTCAG  499

seq1  CCCTGCGTGGCCTGAAGTTCTCACACAGCCCTGGTATCTGTTATCCTTCA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCGTGGCCTGAAGTTCTCACACAGCCCTGGTATCTGTTATCCTTCA  549

seq1  GTGTATTTCTTTCATTTCCACTGGGCCCAGCAAAGGATGTGACTGCAGAA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTCTTTCATTTCCACTGGGCCCAGCAAAGGATGTGACTGCAGAA  599

seq1  GCTACATCTTCAACAGCTCAGTAAATATTTACTGACTGAGATGTTTAGTG  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATCTTCAACAGCTCAGTAAATATTTACTGACTGAGATGTTTAGTG  649

seq1  GACAAGCTCTACTTCTTTACCTTATTCGGCTACATCCTGCTGTTTTTGTT  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCTCTACTTCTTTACCTTATTCGGCTACATCCTGCTGTTTTTGTT  699

seq1  CTTACAGACAGTCACAAAATGTAGGGTTCTTTTTGTTTATTTTATTTTTA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGACAGTCACAAAATGTAGGGTTCTTTTTGTTTATTTTATTTTTA  749

seq1  TTTGTTTATTTATTTTTTATATGTTCAGATTCTGAAGAGAGGATTCCTAT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATTTATTTTTTATATGTTCAGATTCTGAAGAGAGGATTCCTAT  799

seq1  GATCAAACTCTGCCACTAAGACTGGGGATTTTACAAGCTTCTCCTCTTTT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAACTCTGCCACTAAGACTGGGGATTTTACAAGCTTCTCCTCTTTT  849

seq1  GCTGACCAACAGAGGTGGGAAGGACACCACTGGGCTACTATGAGTCAGTA  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCAACAGAGGTGGGAAGGACACCACTGGGCTACTATGAGTCAGTA  899

seq1  TGTAAACATTTAGTTCTAGAGTATTGCAATTGATAATAATAACACTAAGT  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATTTAGTTCTAGAGTATTGCAATTGATAATAATAACACTAAGT  949

seq1  ATTTGATCGATGTTAGTTTTAGTATTGCTGCATTTTCTCGTTTCTTCCCC  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATCGATGTTAGTTTTAGTATTGCTGCATTTTCTCGTTTCTTCCCC  999

seq1  TTCTGTTTTCCCTCCCTCCCTCCCTATTTCCCTCTCTTTTCCTTTCTTCC  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTCCCTCCCTCCCTCCCTATTTCCCTCTCTTTTCCTTTCTTCC  1049

seq1  TTCTCTTCCCTTCCTTCTCTCATTCCTTCATTTCTTCTTCCTTCCATTCC  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCCCTTCCTTCTCTCATTCCTTCATTTCTTCTTCCTTCCATTCC  1099

seq1  TCCTTTCTCTCTCTTTTCTTCTCTCATTTATTTGAATTC  1120
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTCTCTCTTTTCTTCTCTCATTTATTTGAATTC  1138

seq1: chr10_22574182_22575293
seq2: B6Ng01-276C20.g_65_1167

seq1  GAATTCAAAATCACTTAAGGACACAAAGCAAAAGTGTTTATGGGCAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATCACTTAAGGACACAAAGCAAAAGTGTTTATGGGCAGCAA  50

seq1  TAAGGATCTCTGCACAGTGACTTTAGAATGTCGCAGCTCTCCCCCCTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATCTCTGCACAGTGACTTTAGAATGTCGCAGCTCTCCCCCCTCAT  100

seq1  CTTAGATCCCTGGGGAATGAGGGCAGAGCAAGGGAGCCTAAACCGCAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATCCCTGGGGAATGAGGGCAGAGCAAGGGAGCCTAAACCGCAGCG  150

seq1  TAATCAGGGAGCACAGATGGGTAGTATGGCTTATCAGCCTCAGCACGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGGGAGCACAGATGGGTAGTATGGCTTATCAGCCTCAGCACGTGT  200

seq1  GGGCAGTGAGGGAAAAGGAGCAGCGGAGGCAGTGGCCTTGGCTCGGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGAGGGAAAAGGAGCAGCGGAGGCAGTGGCCTTGGCTCGGTGGG  250

seq1  CTTTCTGGGGACCTGCTTTATTTACTTGTTTATTTTGGTATCCCTGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGGGACCTGCTTTATTTACTTGTTTATTTTGGTATCCCTGAGAA  300

seq1  TGGAACCCAGAGTCTCATGTGTCACTCAAGCTTGACAAACGCTCTACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCCAGAGTCTCATGTGTCACTCAAGCTTGACAAACGCTCTACCCA  350

seq1  GCCAGCAAGGGGGCAATGCTAGATAGCAGGGGGTGATGCTCCCTCCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAAGGGGGCAATGCTAGATAGCAGGGGGTGATGCTCCCTCCAGAG  400

seq1  AGGCCTTTTCTCTGGCGTCCCACCCCTGAACACTCATTTACACCATCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTTCTCTGGCGTCCCACCCCTGAACACTCATTTACACCATCACT  450

seq1  AACATATCAACTATGCCTCTGATAGAAAACTCTGAAACAAAACTCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCAACTATGCCTCTGATAGAAAACTCTGAAACAAAACTCATATT  500

seq1  TCATGTGAATATGCGCTGCTGAAACTCAGCTGAGGTTTGAAGAGGATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGAATATGCGCTGCTGAAACTCAGCTGAGGTTTGAAGAGGATGTG  550

seq1  TTCTGCTGTGACATCATTTCCGGTCCGTGCCTTCTGAAAACAAACAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGTGACATCATTTCCGGTCCGTGCCTTCTGAAAACAAACAGTCT  600

seq1  GGATTTGTTAGGGGTTGAATGTCAAATGTTCCTTACAGACTCCTGCGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGTTAGGGGTTGAATGTCAAATGTTCCTTACAGACTCCTGCGTTT  650

seq1  GATGACTTGTTTCCCAGAGTGTGGCACTATTTGGGAAAGTTATGGACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTTGTTTCCCAGAGTGTGGCACTATTTGGGAAAGTTATGGACTCT  700

seq1  TCTAAAGGTAGAGTCTCAGTGGATTGAGTGGGGCCTTGGGATAGCCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGTAGAGTCTCAGTGGATTGAGTGGGGCCTTGGGATAGCCCCAT  750

seq1  GTTTCTACAGTCCAGTTCAGCTTCCTGATCGCGTTCTGGTTCCTGGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTACAGTCCAGTTCAGCTTCCTGATCGCGTTCTGGTTCCTGGTTGC  800

seq1  AAATACAAAGTCATTAACTACTGCACACTCTCTTGACCTGAGAGCCAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAAGTCATTAACTACTGCACACTCTCTTGACCTGAGAGCCAAAA  850

seq1  GTAAGTGTTTCCTCCCTTAATTTGATCTTTGTTGGTATTTGATGACAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGTTTCCTCCCTTAATTTGATCTTTGTTGGTATTTGATGACAGCA  900

seq1  ATGAGACAAGCCAGTACACTCACCTACTCATCTCTATTAAATGACCACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACAAGCCAGTACACTCACCTACTCATCTCTATTAAATGACCACTT  950

seq1  CCTGGGTGGCAGTGG-ATTCCCTGGTAGATGCTAGCATCATAATTCAGGG  999
      ||||||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  CCTGGGTGGCAGTGGAATTCCCTGGTAGATGCTAGCATCATAATTCA-GG  999

seq1  TGAACGATGAACATTTTATTCAGAGGCAAAAAGTAAGTCACGTGAGACTT  1049
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGAACGATGAACATTTTATTCAGAGGCAAAAAGT-AGTCACGTGAGACTT  1048

seq1  AAAGGGAACCCCAGAGGAGGTTACTTGCATAACCACGATTGCCGAGAAGT  1099
      |||||    |||||| |||||||||||||| ||||||| || ||||||||
seq2  AAAGG---ACCCAGA-GAGGTTACTTGCAT-ACCACGAATG-CGAGAAGT  1092

seq1  CTTCAATATATTG  1112
      | |||||| ||||
seq2  C-TCAATA-ATTG  1103