BAC Information

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BAC

Clone NameB6Ng01-276O02
Chromosome10 (Build37)
Map Location 17,012,669 - 17,013,773
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382457, LOC546472, LOC100039576, LOC627511
Downstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276O02.bB6Ng01-276O02.g
ACCGA077547GA077548
length1,1991,105
definitionB6Ng01-276O02.b B6Ng01-276O02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcgcaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaaggagctaaagggatcttcaccct
ataggtggacacattatgactaccagtacccctgagctcttgactctagc
tgcatattgtatcaaaggatgggcctagtcggcatcactggaaagaagag
gctcatggacattgccagacttggtgtgcccgggtacaagggacgcaagt
catgggaggggatgctagatacacacagtactgatcagtagtctactac
gaattcctttcaataacccaggctggctcaaactgcttctgctcctcctg
catctgagtaccgagcttataagcatgtgttatgagctttactctccctt
tctgcaccattcactaatttctataactctcataactctttttgaaacct
ctgatgattttaatagctgtgccaatatctttactgttaatactaattat
ctttggtattagtgtagcctagatctactctcccattgtatttgtgtgac
actgctacctatttaaactattatttttttggatgggcaaagatcatgtt
attcttttgatttataagacaggggatactaaagatcataaatacaacag
attgagggtctagccacagagacattagtttttcaaaatccagtggctta
gctttgccattgtatctgcatgatagtatggctactttaaatgaaagttt
tgttttgtgggaaagggtggccatagtttgaataaaaatgcttccaaaag
tccatctgttaaaggtttgggctccagttgacatgtagaaattttaagag
atggcctagtggaaggttctatgtcactggaagcaagacctttctttctc
tcctttctcatcctggcatgaggtgattttttttttctgttactgtcatg
tgcttcttgccatgaccatttggtagccccaatgagaggtctaaagaaaa
tggctttgcttgaccatggtctggaaaactataaagctatgagccaaatt
cacctttcatctttataagttgatttctctaaggagtgttacccagttga
gatggatgggagagtcatagacaaggaagtgatatatacaccatccttac
tgtttgcttttctctagggcagtttattctcaaccatcacctgcatttta
ggtacctcccaaaaacactgcatcccttatccagaagctgttttgttgca
tagggaaaacaatatctggtggacttggtgaaatggcttaatggggtaaa
catcttaaaatagaggatggtcaggacactatctctgaatggagttggag
agaatgcaagaaaggtatcttactgggtatattacctatgttgggggtgg
aacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_17012669_17013773
seq2: B6Ng01-276O02.g_66_1170 (reverse)

seq1  CTGTT---CACCCAACATA-GTAATATACCAGGTAAGATA-CTTTCTTGG  45
      |||||   | ||||||||| ||||||||||  |||||||| |||||||| 
seq2  CTGTTCCACCCCCAACATAGGTAATATACCCAGTAAGATACCTTTCTTGC  50

seq1  CATCTCTCCAAACTCATTTCAGAGAATAAGTGTTCTGACATTCTTTTTTA  95
        ||||||| |||||  ||||||||   ||||| |||||  ||       
seq2  ATTCTCTCC-AACTCCATTCAGAGA--TAGTGTCCTGACCATC------C  91

seq1  TTTTTTTTAAGATGGTTTTACCCATTAAGCCATTTCA-CAAGTC--ACAG  142
      | | ||||||||| ||||  ||||||||||||||||| ||||||   |||
seq2  TCTATTTTAAGAT-GTTTACCCCATTAAGCCATTTCACCAAGTCCACCAG  140

seq1  ATATTGTTTT-CCTATGCAACAAAACAGCTTCTGGATAAGGGATGCAGTG  191
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTTTCCCTATGCAACAAAACAGCTTCTGGATAAGGGATGCAGTG  190

seq1  -TTTTGGGAGGTACCTAAAATGCAGGTGATGGTTGAGAATAAACTGCCCT  240
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGAGGTACCTAAAATGCAGGTGATGGTTGAGAATAAACTGCCCT  240

seq1  AGAGAAAAGCAAACAGTAAGGATGGTGTATATATCACTTCCTTGTCTATG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGCAAACAGTAAGGATGGTGTATATATCACTTCCTTGTCTATG  290

seq1  ACTCTCCCATCCATCTCAACTGGGTAACACTCCTTAGAGAAATCAACTTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCATCCATCTCAACTGGGTAACACTCCTTAGAGAAATCAACTTA  340

seq1  TAAAGATGAAAGGTGAATTTGGCTCATAGCTTTATAGTTTTCCAGACCAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGAAAGGTGAATTTGGCTCATAGCTTTATAGTTTTCCAGACCAT  390

seq1  GGTCAAGCAAAGCCATTTTCTTTAGACCTCTCATTGGGGCTACCAAATGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGCAAAGCCATTTTCTTTAGACCTCTCATTGGGGCTACCAAATGG  440

seq1  TCATGGCAAGAAGCACATGACAGTAACAGAAAAAAAAAATCACCTCATGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCAAGAAGCACATGACAGTAACAGAAAAAAAAAATCACCTCATGC  490

seq1  CAGGATGAGAAAGGAGAGAAAGAAAGGTCTTGCTTCCAGTGACATAGAAC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGAGAAAGGAGAGAAAGAAAGGTCTTGCTTCCAGTGACATAGAAC  540

seq1  CTTCCACTAGGCCATCTCTTAAAATTTCTACATGTCAACTGGAGCCCAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTAGGCCATCTCTTAAAATTTCTACATGTCAACTGGAGCCCAAA  590

seq1  CCTTTAACAGATGGACTTTTGGAAGCATTTTTATTCAAACTATGGCCACC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACAGATGGACTTTTGGAAGCATTTTTATTCAAACTATGGCCACC  640

seq1  CTTTCCCACAAAACAAAACTTTCATTTAAAGTAGCCATACTATCATGCAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCACAAAACAAAACTTTCATTTAAAGTAGCCATACTATCATGCAG  690

seq1  ATACAATGGCAAAGCTAAGCCACTGGATTTTGAAAAACTAATGTCTCTGT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGGCAAAGCTAAGCCACTGGATTTTGAAAAACTAATGTCTCTGT  740

seq1  GGCTAGACCCTCAATCTGTTGTATTTATGATCTTTAGTATCCCCTGTCTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGACCCTCAATCTGTTGTATTTATGATCTTTAGTATCCCCTGTCTT  790

seq1  ATAAATCAAAAGAATAACATGATCTTTGCCCATCCAAAAAAATAATAGTT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAAAAGAATAACATGATCTTTGCCCATCCAAAAAAATAATAGTT  840

seq1  TAAATAGGTAGCAGTGTCACACAAATACAATGGGAGAGTAGATCTAGGCT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGGTAGCAGTGTCACACAAATACAATGGGAGAGTAGATCTAGGCT  890

seq1  ACACTAATACCAAAGATAATTAGTATTAACAGTAAAGATATTGGCACAGC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATACCAAAGATAATTAGTATTAACAGTAAAGATATTGGCACAGC  940

seq1  TATTAAAATCATCAGAGGTTTCAAAAAGAGTTATGAGAGTTATAGAAATT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATCATCAGAGGTTTCAAAAAGAGTTATGAGAGTTATAGAAATT  990

seq1  AGTGAATGGTGCAGAAAGGGAGAGTAAAGCTCATAACACATGCTTATAAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGGTGCAGAAAGGGAGAGTAAAGCTCATAACACATGCTTATAAG  1040

seq1  CTCGGTACTCAGATGCAGGAGGAGCAGAAGCAGTTTGAGCCAGCCTGGGT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTACTCAGATGCAGGAGGAGCAGAAGCAGTTTGAGCCAGCCTGGGT  1090

seq1  TATTGAAAGGAATTC  1105
      |||||||||||||||
seq2  TATTGAAAGGAATTC  1105