BAC Information

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BAC

Clone NameB6Ng01-277C19
Chromosome10 (Build37)
Map Location 50,974,105 - 50,975,257
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629652, Ascc3, Sim1, LOC268300
Downstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277C19.bB6Ng01-277C19.g
ACCGA077762GA077763
length1,1551,138
definitionB6Ng01-277C19.b B6Ng01-277C19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataattcccttgctgctacccagagctattatggagatgaact
tccaagggctgagctacacaaccctaagtcttcctctgctggagagaggg
attggagttgtagagcatttgagacctgggtgaaggagaggcagaggagg
acaatacgtctgccttgacatgaggcacagaatagaattctgggtctgga
gtagatttaccatgcaacttgagaaaattaccttcttagtcttttcagta
tccatgttcccctctataaaatgggactactgatgttttctttggtagat
tgttgtatgaattagacatggtagaagaaatgttgtctggcatctggtag
gtactccacaaggtataaaataagacatagctattagcaaggatgtgtta
aatattttttgagagatattcaacagctgacatgggataaaaagaaaatg
ttttattgaaaaattcatgtgtattccttgaacacaatgacaggtttcat
atctatcactcatgatactttcccttgtctccccaccactaccagaccac
ctcctcttttctgacagcccctctttgaccttcacgtttgtacataaaat
aatctaaactgcacatatagaagaaatgtgacatttgtctttctggtttg
tcttgatttatttaatataatgatctccagttccatgttccagaaaatgg
cactttttttttccctgtggctgaataaaatcctgttatatacatttgcc
acattccttttatcagcccattcctgatgtatactttggttgattccaga
agctaactgttgagaatagtgtggcaataagcatggatgtaaatttatct
ctgtaacaatctattatctgtatatttactttacctgtatctgtttattg
gcattttcattctaccttgatcaaaaaggaaaggaggaccaagtatatgg
ctactcaaaattgttgtcgtacaaatcatagatggcatgaaatgagacat
ggaaaagtcatgggctatttcagagtcatcagtccctgggactcactgaa
caatattaaagcttgtctttgttctaggttctttcagttggtatattgca
ggcctgccacaggctcaagtacagttaagcaaactgactcagcgtcgtcc
aagca
gaattcaggtaaacaggtagaaacccttaaagaggaaacacaaaaatccc
ttaaagaattataggaaaatacaatgaaaagggtgaaggaattgaacaaa
accatccaggatctaaaaatggaaatataaacaacaaagaaatcacaaag
ggagataaccctggagttagaaacctaggaaaaagatccggagtcataga
tgcaagcatcaccaacagaatacaagaaataggagaaagaatctcatgtg
cagaagataccatagaaaacattgacccaacagtcaaagaaaaagcaaaa
tgcaaaaagctcctaacccaaactatctaggaaatcaaggaaacaacgag
aagaccaatcctaaggataataggtatagaagagagtgaagatactcaaa
gggtcagtaaatatcttcaacaaaattaaagaagaaaatttccctaacct
aaagagagatgcccataaacatacaaaaagcgccaaataaattggaccag
aaaagaaattcttcccatcacatagtagtcaaaacaccaaatgcacaaaa
caaataaagtatattaaaagcagtaagtcacaaacaataatcagaaacaa
aataaaatatcttggtgtgactctaaccaaacaagtgaaaggtctatatg
acaaaaactttaagtttctaaagaaagaatcaaagaagatctcagaagat
ggaaagagctcccaagctcatagattggcaggattaatatagaaaaaaaa
tggtcgtcttgccaaaagcaatctacagattcaatgcatccccatcgaaa
aattccaactcaattaattcttcacagagttagaaagagcaatttgtaaa
ttcatttagaattacagaaaaacccaggatagcaaaaactattctcaaca
ataaaagaacatcttgggaatcaccatcactgacctcaagctgtactaga
gagcatagtggtttaaaaaacaaacaaacaaaaaatctgcatgtatttgt
atagagacagcagcagatcatgtacaaaactgagactcagttatacccaa
catctatggttcactgatctcacaagaatctaaacatctatgaaggtagc
atttcaacaatgttgcctggtcgactgacagatggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50974105_50975257
seq2: B6Ng01-277C19.b_46_1200 (reverse)

seq1  TGCTTGGA-------AAGTCAGTTTGCTAAACTGTTACTTTGAGCTGTGT  43
      ||||||||        |||||||||||| ||||| ||| ||||||  |||
seq2  TGCTTGGACGACGCTGAGTCAGTTTGCTTAACTG-TAC-TTGAGC-CTGT  47

seq1  GCAAGGCTTCCAAATATACAAAATTTAAAGACCCTAGAACAAAGACAAGC  93
      |  |||| | | |||||||  || | ||||| ||||||||||||||||||
seq2  GGCAGGCCTGC-AATATAC-CAACTGAAAGAACCTAGAACAAAGACAAGC  95

seq1  TTTAATATTG-TCAGTGAGTCC--AGGACTGATTGACTCTG-AATAG-CC  138
      |||||||||| |||||||||||   ||||||| |||||||| ||||| ||
seq2  TTTAATATTGTTCAGTGAGTCCCAGGGACTGA-TGACTCTGAAATAGCCC  144

seq1  ATGACTTTTCCATGTTCCTCCATTTCCATGCCATCTATGGTTTGTACGAC  188
      |||||||||||||||  || ||||| ||||||||||||| ||||||||||
seq2  ATGACTTTTCCATGT--CT-CATTT-CATGCCATCTATGATTTGTACGAC  190

seq1  AAC-ATTTTGAGTAGCCATATACTTTGGTCCTCTTTTCCTTTTTGATCAA  237
      ||| ||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  AACAATTTTGAGTAGCCATATAC-TTGGTCCTCCTTTCCTTTTTGATCAA  239

seq1  GGTAGAATGAAAATGCCAATAAACAGATACAGGTAAAGTAAATATACAGA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAATGAAAATGCCAATAAACAGATACAGGTAAAGTAAATATACAGA  289

seq1  TAATAGATTGTTACAGAGATAAATTTACATCCATGCTTATTGCCACACTA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGATTGTTACAGAGATAAATTTACATCCATGCTTATTGCCACACTA  339

seq1  TTCTCAACAGTTAGCTTCTGGAATCAACCAAAGTATACATCAGGAATGGG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACAGTTAGCTTCTGGAATCAACCAAAGTATACATCAGGAATGGG  389

seq1  CTGATAAAAGGAATGTGGCAAATGTATATAACAGGATTTTATTCAGCCAC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAAGGAATGTGGCAAATGTATATAACAGGATTTTATTCAGCCAC  439

seq1  AGGGAAAAAAAAAGTGCCATTTTCTGGAACATGGAACTGGAGATCATTAT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAAAAAAGTGCCATTTTCTGGAACATGGAACTGGAGATCATTAT  489

seq1  ATTAAATAAATCAAGACAAACCAGAAAGACAAATGTCACATTTCTTCTAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAAATCAAGACAAACCAGAAAGACAAATGTCACATTTCTTCTAT  539

seq1  ATGTGCAGTTTAGATTATTTTATGTACAAACGTGAAGGTCAAAGAGGGGC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAGTTTAGATTATTTTATGTACAAACGTGAAGGTCAAAGAGGGGC  589

seq1  TGTCAGAAAAGAGGAGGTGGTCTGGTAGTGGTGGGGAGACAAGGGAAAGT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAAAAGAGGAGGTGGTCTGGTAGTGGTGGGGAGACAAGGGAAAGT  639

seq1  ATCATGAGTGATAGATATGAAACCTGTCATTGTGTTCAAGGAATACACAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGTGATAGATATGAAACCTGTCATTGTGTTCAAGGAATACACAT  689

seq1  GAATTTTTCAATAAAACATTTTCTTTTTATCCCATGTCAGCTGTTGAATA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCAATAAAACATTTTCTTTTTATCCCATGTCAGCTGTTGAATA  739

seq1  TCTCTCAAAAAATATTTAACACATCCTTGCTAATAGCTATGTCTTATTTT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAAAAAATATTTAACACATCCTTGCTAATAGCTATGTCTTATTTT  789

seq1  ATACCTTGTGGAGTACCTACCAGATGCCAGACAACATTTCTTCTACCATG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGTGGAGTACCTACCAGATGCCAGACAACATTTCTTCTACCATG  839

seq1  TCTAATTCATACAACAATCTACCAAAGAAAACATCAGTAGTCCCATTTTA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCATACAACAATCTACCAAAGAAAACATCAGTAGTCCCATTTTA  889

seq1  TAGAGGGGAACATGGATACTGAAAAGACTAAGAAGGTAATTTTCTCAAGT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGGAACATGGATACTGAAAAGACTAAGAAGGTAATTTTCTCAAGT  939

seq1  TGCATGGTAAATCTACTCCAGACCCAGAATTCTATTCTGTGCCTCATGTC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTAAATCTACTCCAGACCCAGAATTCTATTCTGTGCCTCATGTC  989

seq1  AAGGCAGACGTATTGTCCTCCTCTGCCTCTCCTTCACCCAGGTCTCAAAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGACGTATTGTCCTCCTCTGCCTCTCCTTCACCCAGGTCTCAAAT  1039

seq1  GCTCTACAACTCCAATCCCTCTCTCCAGCAGAGGAAGACTTAGGGTTGTG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACAACTCCAATCCCTCTCTCCAGCAGAGGAAGACTTAGGGTTGTG  1089

seq1  TAGCTCAGCCCTTGGAAGTTCATCTCCATAATAGCTCTGGGTAGCAGCAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAGCCCTTGGAAGTTCATCTCCATAATAGCTCTGGGTAGCAGCAA  1139

seq1  GGGAATTATGGAATTC  1153
      ||||||||||||||||
seq2  GGGAATTATGGAATTC  1155