BAC Information

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BAC

Clone NameB6Ng01-277D04
Chromosome10 (Build37)
Map Location 31,142,407 - 31,143,482
singlet/doubletsinglet
Overlap geneTpd52l1
Upstream geneTrmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, LOC100041294
Downstream geneIbrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277D04.bB6Ng01-277D04.g
ACCGA077780GA077781
length1,0841,075
definitionB6Ng01-277D04.b B6Ng01-277D04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggaagtctttcatttctttttattacttctttgaccaagtta
tcattgagtagagagttgttcagtttccatgggtctgtgggttttctgtt
ggttttgttgttattgaagaccagccttaatctgtggtgatctgatagga
tgcatgggattatttcaatcttcttgtaatggttgaggcttgttttctga
ctgactatatggtcaagattggagaaggtaccctgaggtgctgagaagaa
gctatattctattgttttagggtgaaatgttctatagctgtctgttaaat
ccatttgtttcataacatctattagattcactgtgtctctatttagtttt
tgtttcaataacctgtctattactgagagttggatgttgaagtctcccac
tattattgtttggggttcaatgtatactttgagctttagtaaaagtttct
tttatgaatgtgggtaccttcataattgggacatagatgttcagaactga
gactttctcttggaggatttttcctttgatgaatatgatgtgtccttcct
catctcacttgataactttggttaaaagtccattttattggatattagga
gacaacttgtttcctgaaaccatttgcttgacagacttttttcccagcct
tttattctaagggagtgtctgtctttcttattgaggtgtgtttcgtataa
gcagcaaactgctggattctgttcatatatctagtctgttagcttatggg
tttttttaaataggagaattgagtccattgatattgagagatattacaga
ttattgttagttcctggtatgtttgttgtaggtggcattatgtgcatata
attctctccttttgacttttgtgatgagatgattaatatcttgttttttt
ttttttttctttgggtggaggtaccctctttgtgtttgggagttttactt
ctgaaatcctttggtaagggctggattggtagatagctactgttgatttg
ggttttgtcttgcaatatttcggctttcttcatctatgttgaattgagaa
gtttggctaggttatatgtaaaccttgagatggg
gaattcaaagtcagcttgggcaacttggaaggatgctgtctggaaatcaa
aacacaattggcatattagataatttgcctagcatctacatggctctggg
ttcaatcttcagtacttgacaaagacaagaaaaaagataaaagaaaggaa
aaataaaagaaaagttcagtattctactattacatgttcctgatagtgaa
atcttgaagacaatataagttgggagttgggatattaggataaaccctat
ccaagaaacaaaacaaaaaacaaacaaacaaacaaacaaacaaacaaaaa
aaccagtgagggtgctatgtaaaagttaagaggtaaatataggaaatggg
gagagaaaaatctgcaaagatgcctttgtgggagaaaaagaaacagagga
aataggtcaagctacctcaagactgaaaagagaaatttgggcaagagatg
atatggtggtctctgggaaactctctgggctgactccaccttcctcttgt
gatgttagtaaattctgatgttcacttgagcagttgtgggcttagagtct
aagagcacaaaagaaatcactggagcgctgttgtataatttactaataag
ggtacctctgagacctagggaggtattaatgaacttattgtagctgtact
ttctagagagcagctataaatattaaccaaaagtatgagaagggcaagga
gacagacaggatgtttgacttctgcagtgaggtttacttgtctgggcatt
gtagaaaaccattcagatcggatcaggaccttcttgcaagtggggtactg
aaatcaagaagcaccgacgggcttgagggaagcatgaaaatgttgtagaa
gcacaccacactctcacttttcatgacacataaagacaagctgccttctt
ccagagtcgtgagctgaagttattagccacttgtgggcgttgcatttcgg
ggagaatggggtgaagatgagtgagtcctcctctaatagtagcagagagt
gctgaggggagtgattgtgggagctagttaggtagaagggaagggaacct
tgtcaactgaatgtgagacctgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31142407_31143482
seq2: B6Ng01-277D04.g_64_1138 (reverse)

seq1  ATACA-GTCTCACATCCAGTTGAC-AGGTCCCCTCCCTTTCTACCTTAAA  48
      ||||| ||||||||| |||||||| |||| |||| || ||||||||  ||
seq2  ATACAGGTCTCACATTCAGTTGACAAGGTTCCCTTCCCTTCTACCT--AA  48

seq1  CTAGCTCCCACAACCACT-CCCTCAGCACTCCTCTGCTACTATTAGAGGA  97
      ||||||||||||| |||| ||||||||||| |||||||||||||||||||
seq2  CTAGCTCCCACAATCACTCCCCTCAGCACT-CTCTGCTACTATTAGAGGA  97

seq1  GGACTCACTCATCTTCACCCCATTCTCCCCGAAAATGCAACGCCCACAAG  147
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGACTCACTCATCTTCACCCCATTCTCCCCG-AAATGCAACGCCCACAAG  146

seq1  TGGCTAATAACTTCAGCTCACGACTCTGGAAGAAGGCAGCTTGTCCTTAT  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGCTAATAACTTCAGCTCACGACTCTGGAAGAAGGCAGCTTGTCTTTAT  196

seq1  GTGTCATGAAAAGTGAGAGTGTGGTGTGCTTCTACAACATTTTCATGCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATGAAAAGTGAGAGTGTGGTGTGCTTCTACAACATTTTCATGCTT  246

seq1  CCCTCAAGCCCGTCGGTGCTTCTTGATTTCAGTACCCCACTTGCAAGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAAGCCCGTCGGTGCTTCTTGATTTCAGTACCCCACTTGCAAGAAG  296

seq1  GTCCTGATCCGATCTGAATGGTTTTCTACAATGCCCAGACAAGTAAACCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGATCCGATCTGAATGGTTTTCTACAATGCCCAGACAAGTAAACCT  346

seq1  CACTGCAGAAGTCAAACATCCTGTCTGTCTCCTTGCCCTTCTCATACTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGAAGTCAAACATCCTGTCTGTCTCCTTGCCCTTCTCATACTTT  396

seq1  TGGTTAATATTTATAGCTGCTCTCTAGAAAGTACAGCTACAATAAGTTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATATTTATAGCTGCTCTCTAGAAAGTACAGCTACAATAAGTTCA  446

seq1  TTAATACCTCCCTAGGTCTCAGAGGTACCCTTATTAGTAAATTATACAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACCTCCCTAGGTCTCAGAGGTACCCTTATTAGTAAATTATACAAC  496

seq1  AGCGCTCCAGTGATTTCTTTTGTGCTCTTAGACTCTAAGCCCACAACTGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTCCAGTGATTTCTTTTGTGCTCTTAGACTCTAAGCCCACAACTGC  546

seq1  TCAAGTGAACATCAGAATTTACTAACATCACAAGAGGAAGGTGGAGTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGAACATCAGAATTTACTAACATCACAAGAGGAAGGTGGAGTCAG  596

seq1  CCCAGAGAGTTTCCCAGAGACCACCATATCATCTCTTGCCCAAATTTCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGAGTTTCCCAGAGACCACCATATCATCTCTTGCCCAAATTTCTC  646

seq1  TTTTCAGTCTTGAGGTAGCTTGACCTATTTCCTCTGTTTCTTTTTCTCCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGTCTTGAGGTAGCTTGACCTATTTCCTCTGTTTCTTTTTCTCCC  696

seq1  ACAAAGGCATCTTTGCAGATTTTTCTCTCCCCATTTCCTATATTTACCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGCATCTTTGCAGATTTTTCTCTCCCCATTTCCTATATTTACCTC  746

seq1  TTAACTTTTACATAGCACCCTCACTGGTTTTTTTGTTTGTTTGTTTGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTTACATAGCACCCTCACTGGTTTTTTTGTTTGTTTGTTTGTTT  796

seq1  GTTTGTTTGTTTTTTGTTTTGTTTCTTGGATAGGGTTTATCCTAATATCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTTTGTTTTGTTTCTTGGATAGGGTTTATCCTAATATCC  846

seq1  CAACTCCCAACTTATATTGTCTTCAAGATTTCACTATCAGGAACATGTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCCAACTTATATTGTCTTCAAGATTTCACTATCAGGAACATGTAA  896

seq1  TAGTAGAATACTGAACTTTTCTTTTATTTTTCCTTTCTTTTATCTTTTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAATACTGAACTTTTCTTTTATTTTTCCTTTCTTTTATCTTTTTT  946

seq1  CTTGTCTTTGTCAAGTACTGAAGATTGAACCCAGAGCCATGTAGATGCTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTTTGTCAAGTACTGAAGATTGAACCCAGAGCCATGTAGATGCTA  996

seq1  GGCAAATTATCTAATATGCCAATTGTGTTTTGATTTCCAGACAGCATCCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATTATCTAATATGCCAATTGTGTTTTGATTTCCAGACAGCATCCT  1046

seq1  TCCAAGTTGCCCAAGCTGACTTTGAATTC  1076
      |||||||||||||||||||||||||||||
seq2  TCCAAGTTGCCCAAGCTGACTTTGAATTC  1075