BAC Information

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BAC

Clone NameB6Ng01-277D12
Chromosome10 (Build37)
Map Location 45,270,656 - 45,271,733
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546476, 4930431F10Rik, LOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps
Downstream geneLOC100042364, Hace1, LOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277D12.bB6Ng01-277D12.g
ACCGA077796GA077797
length1,1931,081
definitionB6Ng01-277D12.b B6Ng01-277D12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtagatgctcacagtcagctaatggatgggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
tataggtggaacacattatgagctaccagtaccccggagctcttgactct
agctgcatattatatcaacagatggcctagtccgcatcactggaagaaag
aggctcattgactggccaactttatatgcccaagtacagggaagtcaggc
tgaaggggaattggttggcagagagaaattgtggggttgtact
gaattcagttagtcatgtttatgaccatgggaaaagtgcatgttgtaggt
ctgtggtcatggtgtctcttcacagtgatagaacaatgactaagacagac
agtatgaacttggacaaccagtatttacacagaaccccagcacctgaact
cccttctattgtggttaactctgaacactaagggtaccagctattttagt
agcctgattttcaccacagaaactaaaagcaagctcactgtcctcatctc
cttttcccctaaagcagaaacataagctagtctcattcaatcatatgttc
catcctcagaggagtatttgtttaacctatgttctcctcctttgagcttg
gagtcacagggataggtcattgtcttaaacctgcatgcaccttggattcc
ccaacaaaagaacctcacaggagagatttcttctctatgagatagttatc
tgtaataatgtggctatactctagagaaaaagtagtggcctcttgagact
catccactcaaatgatggcagggatactgacttttggggaccatgctgaa
gaaccagaattgagacaataataaccaaccatagctagaacaggactgtt
taattatgaatgcttcttgcttcacttctgtgattccttcctctatttaa
atatgaactttgtgtcagtcctcttcaaaatagactttgggtcattggac
ccttctttttattctcttcccaatgtggtttcattgaatacatctctttc
tgtttttaacaattacttgtctctttgaatgatgtattggagatgggtag
gtaattccagttttctggggctgcaagagccccagacttttactcccaaa
actgtttgtttgttggttggttgggttgggttttaattttaaaaagttta
ttttatgtgaatttgtgttttgcctgtagatagggtctgtgtgagggtgt
caatgctctgggactgaagtacagattgatgtgacgatgccatggcggtg
ctgggaattgatcccgggtccctctggattcagctagggttccgtaccac
ttaatctttctctgacccttaaaaactcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45270656_45271733
seq2: B6Ng01-277D12.g_68_1148

seq1  GAATTCAGTTAGTCATGTTTATGACCATGGGAAAAGTGCATGTTGTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTAGTCATGTTTATGACCATGGGAAAAGTGCATGTTGTAGGT  50

seq1  CTGTGGTCATGGTGTCTCTTCACAGTGATAGAACAATGACTAAGACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCATGGTGTCTCTTCACAGTGATAGAACAATGACTAAGACAGAC  100

seq1  AGTATGAACTTGGACAACCAGTATTTACACAGAACCCCAGCACCTGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAACTTGGACAACCAGTATTTACACAGAACCCCAGCACCTGAACT  150

seq1  CCCTTCTATTGTGGTTAACTCTGAACACTAAGGGTACCAGCTATTTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTATTGTGGTTAACTCTGAACACTAAGGGTACCAGCTATTTTAGT  200

seq1  AGCCTGATTTTCACCACAGAAACTAAAAGCAAGCTCACTGTCCTCATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGATTTTCACCACAGAAACTAAAAGCAAGCTCACTGTCCTCATCTC  250

seq1  CTTTTCCCCTAAAGCAGAAACATAAGCTAGTCTCATTCAATCATATGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCCTAAAGCAGAAACATAAGCTAGTCTCATTCAATCATATGTTC  300

seq1  CATCCTCAGAGGAGTATTTGTTTAACCTATGTTCTCCTCCTTTGAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCAGAGGAGTATTTGTTTAACCTATGTTCTCCTCCTTTGAGCTTG  350

seq1  GAGTCACAGGGATAGGTCATTGTCTTAAACCTGCATGCACCTTGGATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACAGGGATAGGTCATTGTCTTAAACCTGCATGCACCTTGGATTCC  400

seq1  CCAACAAAAGAACCTCACAGGAGAGATTTCTTCTCTATGAGATAGTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAAGAACCTCACAGGAGAGATTTCTTCTCTATGAGATAGTTATC  450

seq1  TGTAATAATGTGGCTATACTCTAGAGAAAAAGTAGTGGCCTCTTGAGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAATGTGGCTATACTCTAGAGAAAAAGTAGTGGCCTCTTGAGACT  500

seq1  CATCCACTCAAATGATGGCAGGGATACTGACTTTTGGGGACCATGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACTCAAATGATGGCAGGGATACTGACTTTTGGGGACCATGCTGAA  550

seq1  GAACCAGAATTGAGACAATAATAACCAACCATAGCTAGAACAGGACTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGAATTGAGACAATAATAACCAACCATAGCTAGAACAGGACTGTT  600

seq1  TAATTATGAATGCTTCTTGCTTCACTTCTGTGATTCCTTCCTCTATTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGAATGCTTCTTGCTTCACTTCTGTGATTCCTTCCTCTATTTAA  650

seq1  ATATGAACTTTGTGTCAGTCCTCTTCAAAATAGACTTTGGGTCATTGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAACTTTGTGTCAGTCCTCTTCAAAATAGACTTTGGGTCATTGGAC  700

seq1  CCTTCTTTTTATTCTCTTCCCAATGTGGTTTCATTGAATACATCTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTTTATTCTCTTCCCAATGTGGTTTCATTGAATACATCTCTTTC  750

seq1  TGTTTTTAACAATTACTTGTCTCTTTGAATGATGTATTGGAGATGGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAACAATTACTTGTCTCTTTGAATGATGTATTGGAGATGGGTAG  800

seq1  GTAATTCCAGTTTTCTGGGGCTGCAAGAGCCCCAGACTTTTACTCCCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCCAGTTTTCTGGGGCTGCAAGAGCCCCAGACTTTTACTCCCAAA  850

seq1  ACTGTTTGTTTGTTGGTTGGTTGG--TTGGTTTTAATTTT-AAAAGTTTA  897
      ||||||||||||||||||||||||  | |||||||||||| |||||||||
seq2  ACTGTTTGTTTGTTGGTTGGTTGGGTTGGGTTTTAATTTTAAAAAGTTTA  900

seq1  TTTTATGTGAATTTGTGTTTTGCCTGTAGATA-GGTCTGTGTGAGGGTGT  946
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTATGTGAATTTGTGTTTTGCCTGTAGATAGGGTCTGTGTGAGGGTGT  950

seq1  CAAATGCTCTGGAACTGAAGTTACAGATAGATGTGA-GATGCCATGTGGG  995
      | |||||||||| ||||||| ||||||| ||||||| |||||||||  ||
seq2  C-AATGCTCTGGGACTGAAG-TACAGATTGATGTGACGATGCCATGGCGG  998

seq1  TGCTGGGAATTGAATCCGGGT-CCTCTGGATTCAACTAGTGTTCCTAACC  1044
      |||||||||||||  |||||| |||||||||||| |||| |||||  |||
seq2  TGCTGGGAATTGATCCCGGGTCCCTCTGGATTCAGCTAGGGTTCCGTACC  1048

seq1  ACTAAACCATTTCTCTAGCCCCTAAAAACTCTTG  1078
      ||| || | |||||||  ||| ||||||||||||
seq2  ACTTAATC-TTTCTCTGACCCTTAAAAACTCTTG  1081