BAC Information

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BAC

Clone NameB6Ng01-277G21
Chromosome10 (Build37)
Map Location 87,133,640 - 87,221,445
singlet/doubletdoublet
Overlap geneLOC100041517
Upstream geneHsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2, 1700113H08Rik, Ascl1, Pah
Downstream geneENSMUSG00000058934, Igf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414, LOC100042998, EG435236, Spic, EG237433, Arl1, Utp20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277G21.bB6Ng01-277G21.g
ACCGA077952GA077953
length1,1801,087
definitionB6Ng01-277G21.b B6Ng01-277G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,220,255 - 87,221,445)(87,133,640 - 87,134,731)
sequence
gaattcaataaataggagtgatctggcttttaacacaatggaatggaaca
attgcagattgatgcagtatgaccatacaggaagcccctggagaaatact
gtgtgaatcatatttagtgactgcagtagcagaagcctaacaattaatga
caatatgtagcttatgaaaggattgtatattctcacattaaaacaaacaa
aaatgagttaatttgatttgtgtgtttaatgaaaataacaaatgcttaga
attgaatgaaaataaaaattataggatagtagtcaattggttcttgaaaa
gagatttatacccgtaagtggcttattggaagtttaaaaaggtttaaatg
tttaaaaataaattagtcttcccatccaggaagctaggggtaaaaggaat
aaagaaatattagaatggggattatcaacagaaaaccaaagttgaaatta
gaaaactgtacaaatatcaaatcatagagttactaagtgaaaccaagagc
caattctgtgaaaagtctcacaaagtaattaaaactctggaaaaataata
actggaagaaaaaggaagacacaaatagaatttgaattgacaataggatc
agaaacaaattttgtaccatcagagggtacaaaaatgttttgaaaattat
agaaatttcacaaaccattttgtacagaggaacttgaatcctaaataagt
caagaaaattaaagaaattgacaaaataatctcagtaccatagtctaata
aacacaaaggaaacagaggtagaaaccatgtgtgtctcaaaaaaagatct
ggcccaattatcttcatggggatgttctagcaaacctttaaggaatagat
aactcccaataatataaaagaaaatgtgaactccatccaacatattttgt
aaagttaaacagtgatgtcaaatcagacatgcccactgtgagattaacct
attatatatttttttcttgcaaccttaatctattcataggtaagtgtaaa
tttgctgctgatccgtgtacttcattatttatttgaattgattatgctgc
ttcaaacaaaattctatcttaagatgattctattaaacattgatagaaag
gatccttgttgggggacttggtttggcttctatcactttgttcaataagg
tttccaagttcatgtttatagtaatttata
gaattctagaagttgaagaaaagttgtgagctttggaaattgtctatcct
gtcagtcccaggtgagtagcagacacagaagtttcccaatctccatagca
tcagaactcatctgtagcacggagttaatgacccctgccaaatgaagaca
ccctgagattgatgaagtacttaagtacagaacccacccacccatcagtg
gacatgttgctgttcctggcatacaacataggctgaaatgttgtgatgac
tgcagactttggaggacattgtccaggaaacgtgatttttaaccttaagg
aatttaaagtctagaaggagacaaagtaagcacataagaagttgaaggaa
atgaaagatgattattacaaaggattgttccctgagccatgggttctata
agaattatgattctaagagtagaaatagtaaacatattacaaagtagagt
atgtaacttatccaagttcttagtttatgccagacatttattgaacatta
tctcattccctgtactcaattatatgtgatatagatgatataaaaatgct
ttctgtttcatatgtgaagtatttctttgcaaagtcttattatgaagaat
gaagaagaattgaacaaggatttgttcagtttctacatatttctaagtag
acgtgcattccctttattatccacagaaggctgtgaatgatgttaactat
aagtttctcagagtcagaggattaaataccttcctagagccacacaatgg
gaagccagcaaagtcaaaatggtgtcccatttctcaaagatacccacctt
acagctctgatgtctcagagaaagaaatccctacatataatcatttctgg
tcttctttttccatctctccagcaggcactgacctggacatgtgtgtgat
gtacaacataagagtgaacatgacagacaaggttcctgcctctacaaagc
tcatattcttagcagaggtacaatgtcaaagagaaaatggctttctagca
cccagcatgattcttggttctaataatgatgccttcataaataggcattg
tttcacgtctagctattccaatgccaaaataggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_87220255_87221445
seq2: B6Ng01-277G21.b_50_1229 (reverse)

seq1  TATAAATTACTATAAACATGAACTTTGAGACACCTATATTGAAACCAAGT  50
      |||||||||||||||||||||||||   || |||| ||||| ||| ||||
seq2  TATAAATTACTATAAACATGAACTT--GGAAACCT-TATTG-AACAAAGT  46

seq1  -AT-GAAACCAAACAAATTTCCCCCCAAACAAGATCCTTTTCTATCAAAT  98
       || ||| |||||| || |  |||||||  | ||||| |||||||| |||
seq2  GATAGAAGCCAAACCAAGT--CCCCCAACAAGGATCC-TTTCTATC-AAT  92

seq1  GTTT-ATAGAATCATCTTTAAAGATTAGAATTTTGTTTGAAGCAGCAATA  147
      |||| |||||||||||||  |||| ||||||||||||||||||||| |||
seq2  GTTTAATAGAATCATCTT--AAGA-TAGAATTTTGTTTGAAGCAGC-ATA  138

seq1  ATCAAATCAAATAAATAATGAAGTACACGGATCAGCAGCAAATTTACAAC  197
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCAATTCAAATAAATAATGAAGTACACGGATCAGCAGCAAATTTAC-AC  187

seq1  TTACCTATGAATAAGATTAAGGTTGCAAG-AAAAAATATATAATAGGTTA  246
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  TTACCTATGAAT-AGATTAAGGTTGCAAGAAAAAAATATATAATAGGTTA  236

seq1  ATCTCACAGTGGGCATTGTCTGATTTGACATCACTGTTTAACTTTACAAA  296
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATCTCACAGTGGGCA-TGTCTGATTTGACATCACTGTTTAACTTTACAAA  285

seq1  ATATGTTGGATGGAGTTCACATTTTCTTTTATATTATTGGGAGTTATCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTGGATGGAGTTCACATTTTCTTTTATATTATTGGGAGTTATCTA  335

seq1  TTCCTTAAAGGTTTGCTAGAACATCCCCATGAAGATAATTGGGCCAGATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAAAGGTTTGCTAGAACATCCCCATGAAGATAATTGGGCCAGATC  385

seq1  TTTTTTTGAGACACACATGGTTTCTACCTCTGTTTCCTTTGTGTTTATTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGACACACATGGTTTCTACCTCTGTTTCCTTTGTGTTTATTA  435

seq1  GACTATGGTACTGAGATTATTTTGTCAATTTCTTTAATTTTCTTGACTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGGTACTGAGATTATTTTGTCAATTTCTTTAATTTTCTTGACTTA  485

seq1  TTTAGGATTCAAGTTCCTCTGTACAAAATGGTTTGTGAAATTTCTATAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATTCAAGTTCCTCTGTACAAAATGGTTTGTGAAATTTCTATAAT  535

seq1  TTTCAAAACATTTTTGTACCCTCTGATGGTACAAAATTTGTTTCTGATCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACATTTTTGTACCCTCTGATGGTACAAAATTTGTTTCTGATCC  585

seq1  TATTGTCAATTCAAATTCTATTTGTGTCTTCCTTTTTCTTCCAGTTATTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCAATTCAAATTCTATTTGTGTCTTCCTTTTTCTTCCAGTTATTA  635

seq1  TTTTTCCAGAGTTTTAATTACTTTGTGAGACTTTTCACAGAATTGGCTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAGAGTTTTAATTACTTTGTGAGACTTTTCACAGAATTGGCTCT  685

seq1  TGGTTTCACTTAGTAACTCTATGATTTGATATTTGTACAGTTTTCTAATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCACTTAGTAACTCTATGATTTGATATTTGTACAGTTTTCTAATT  735

seq1  TCAACTTTGGTTTTCTGTTGATAATCCCCATTCTAATATTTCTTTATTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTGGTTTTCTGTTGATAATCCCCATTCTAATATTTCTTTATTCC  785

seq1  TTTTACCCCTAGCTTCCTGGATGGGAAGACTAATTTATTTTTAAACATTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCCTAGCTTCCTGGATGGGAAGACTAATTTATTTTTAAACATTT  835

seq1  AAACCTTTTTAAACTTCCAATAAGCCACTTACGGGTATAAATCTCTTTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTTTAAACTTCCAATAAGCCACTTACGGGTATAAATCTCTTTTC  885

seq1  AAGAACCAATTGACTACTATCCTATAATTTTTATTTTCATTCAATTCTAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAATTGACTACTATCCTATAATTTTTATTTTCATTCAATTCTAA  935

seq1  GCATTTGTTATTTTCATTAAACACACAAATCAAATTAACTCATTTTTGTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTTATTTTCATTAAACACACAAATCAAATTAACTCATTTTTGTT  985

seq1  TGTTTTAATGTGAGAATATACAATCCTTTCATAAGCTACATATTGTCATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAATGTGAGAATATACAATCCTTTCATAAGCTACATATTGTCATT  1035

seq1  AATTGTTAGGCTTCTGCTACTGCAGTCACTAAATATGATTCACACAGTAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTAGGCTTCTGCTACTGCAGTCACTAAATATGATTCACACAGTAT  1085

seq1  TTCTCCAGGGGCTTCCTGTATGGTCATACTGCATCAATCTGCAATTGTTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGGGGCTTCCTGTATGGTCATACTGCATCAATCTGCAATTGTTC  1135

seq1  CATTCCATTGTGTTAAAAGCCAGATCACTCCTATTTATTGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATTGTGTTAAAAGCCAGATCACTCCTATTTATTGAATTC  1180

seq1: chr10_87133640_87134731
seq2: B6Ng01-277G21.g_67_1153

seq1  GAATTCTAGAAGTTGAAGAAAAGTTGTGAGCTTTGGAAATTGTCTATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAGTTGAAGAAAAGTTGTGAGCTTTGGAAATTGTCTATCCT  50

seq1  GTCAGTCCCAGGTGAGTAGCAGACACAGAAGTTTCCCAATCTCCATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCCCAGGTGAGTAGCAGACACAGAAGTTTCCCAATCTCCATAGCA  100

seq1  TCAGAACTCATCTGTAGCACGGAGTTAATGACCCCTGCCAAATGAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACTCATCTGTAGCACGGAGTTAATGACCCCTGCCAAATGAAGACA  150

seq1  CCCTGAGATTGATGAAGTACTTAAGTACAGAACCCACCCACCCATCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGATTGATGAAGTACTTAAGTACAGAACCCACCCACCCATCAGTG  200

seq1  GACATGTTGCTGTTCCTGGCATACAACATAGGCTGAAATGTTGTGATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTGCTGTTCCTGGCATACAACATAGGCTGAAATGTTGTGATGAC  250

seq1  TGCAGACTTTGGAGGACATTGTCCAGGAAACGTGATTTTTAACCTTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACTTTGGAGGACATTGTCCAGGAAACGTGATTTTTAACCTTAAGG  300

seq1  AATTTAAAGTCTAGAAGGAGACAAAGTAAGCACATAAGAAGTTGAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAGTCTAGAAGGAGACAAAGTAAGCACATAAGAAGTTGAAGGAA  350

seq1  ATGAAAGATGATTATTACAAAGGATTGTTCCCTGAGCCATGGGTTCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGATGATTATTACAAAGGATTGTTCCCTGAGCCATGGGTTCTATA  400

seq1  AGAATTATGATTCTAAGAGTAGAAATAGTAAACATATTACAAAGTAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATGATTCTAAGAGTAGAAATAGTAAACATATTACAAAGTAGAGT  450

seq1  ATGTAACTTATCCAAGTTCTTAGTTTATGCCAGACATTTATTGAACATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACTTATCCAAGTTCTTAGTTTATGCCAGACATTTATTGAACATTA  500

seq1  TCTCATTCCCTGTACTCAATTATATGTGATATAGATGATATAAAAATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCCCTGTACTCAATTATATGTGATATAGATGATATAAAAATGCT  550

seq1  TTCTGTTTCATATGTGAAGTATTTCTTTGCAAAGTCTTATTATGAAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCATATGTGAAGTATTTCTTTGCAAAGTCTTATTATGAAGAAT  600

seq1  GAAGAAGAATTGAACAAGGATTTGTTCAGTTTCTACATATTTCTAAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAATTGAACAAGGATTTGTTCAGTTTCTACATATTTCTAAGTAG  650

seq1  ACGTGCATTCCCTTTATTATCCACAGAAGGCTGTGAATGATGTTAACTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATTCCCTTTATTATCCACAGAAGGCTGTGAATGATGTTAACTAT  700

seq1  AAGTTTCTCAGAGTCAGAGGATTAAATACCTTCCTAGAGCCACACAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTCAGAGTCAGAGGATTAAATACCTTCCTAGAGCCACACAATGG  750

seq1  GAAGCCAGCAAAGTCAAAATGGTGTCCCATTTCTCAAAGATACCCACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGCAAAGTCAAAATGGTGTCCCATTTCTCAAAGATACCCACCTT  800

seq1  ACAGCTCTGATGTCTCAGAGAAAGAAATCCCTACATATAATCATTTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTGATGTCTCAGAGAAAGAAATCCCTACATATAATCATTTCTGG  850

seq1  TCTTCTTTTTCCATCTCTCCAGCAGGCACTGACCTGGACATGTGTGTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTCCATCTCTCCAGCAGGCACTGACCTGGACATGTGTGTGAT  900

seq1  GTACAAACATAAGAGTGAACATGACAGACAAGGTTCCTGCCTCTACAAAG  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAC-AACATAAGAGTGAACATGACAGACAAGGTTCCTGCCTCTACAAAG  949

seq1  CTCATATTCTTAGCAGAGGTACAATGTCAAAGAGAAAATGGCTTCTTAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  CTCATATTCTTAGCAGAGGTACAATGTCAAAGAGAAAATGGCTTTCTAGC  999

seq1  ACCCAGCAATGATTCTTGGTTCTAATAATTGGATGGCTTTCCATAAATAG  1050
      ||||||| |||||||||||||||||||||  |||| |||  |||||||||
seq2  ACCCAGC-ATGATTCTTGGTTCTAATAAT--GATGCCTT--CATAAATAG  1044

seq1  GCATTGTTTCACGGTCTAGCTA-TCAAATGCCCAAATA-GTGTG  1092
      |||||||||||| ||||||||| || |||||| ||||| |||||
seq2  GCATTGTTTCAC-GTCTAGCTATTCCAATGCCAAAATAGGTGTG  1087