BAC Information

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BAC

Clone NameB6Ng01-279P20
Chromosome10 (Build37)
Map Location 129,178,997 - 129,180,241
singlet/doubletsinglet
Overlap genenone
Upstream geneDgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806
Downstream geneOlfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279P20.bB6Ng01-279P20.g
ACCGA079831GA079832
length1,1941,146
definitionB6Ng01-279P20.b B6Ng01-279P20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagaacttctgtgtctttcctacatttgcaattggtcagattg
tatttttcttttttctatttatttttaatgtttatttagaaacacacaca
cacacacacacacacacacacactcactcacacggttttgggggacaggg
tttctcttttgtttccctgactgtctgactgtcctggaactcactcaaga
ccaggctgacctttacctcagattcacttgtctctgcctcccaagttctg
gcgttaaagatttggtccaccattgtccaactccaatattttttacatac
tactgagcatctgcatttacacctttcctctggggtgtcagaatgctgcc
gatgtgcctctcagaagaagcaaaactctagagcattatgctacattttt
ttctgtcactgctggagtgcccaagcaccaacatgtgacactcggggtag
gcaaaactcagtctaagataggtgtcccagtatgtgtttgttcaggtaag
aaacagcagaggctgggactgaaactttctcaaacccctgtacacctaaa
cactgctgggaactgtgaggagttgagaacggtgtttcccatcctgtata
cctagtcacttctggagacctgaggagttgggaacaggagtgctgaacac
tattatgacccagggatgagggaaatccagcttagctctgagtgagtacc
aggagtttagaaggaccttctatgagagacttaggtgggggctctaaatg
gtgaatgcctttccccttctcctgtggcaattcttgatgaaggagacagt
ccttgcttgtccaaactgctctactcatggtggatgtggatgtatacatc
caattaaaggtgaacaagagattaaataccttcttcaggaagggatgccc
attaagaaaagctcattggcatttgcaaaacacaagaaaatcaagaagga
agaccaacacgtggatacttcattcctccctagaataagagaataaaaat
acctcatggaaggagttacagaagacaagttgagctagatgaaaagatgg
acatcagagactgcccacccggggttcatccatatcagctacgaacccag
actctaatggaattgccagcaagattggcctgaaggactgatagcgtacc
tgtggaggctatgtcagtgtcctgtcctattacacgaacgttga
gaattctcagggtaactgcaaaccaagaccatcatttatttcctcaggga
gtgccaaatttagatacagaattattttctatagaaataaaaatgtgtgc
acaaactttttctttttaaagctatgattctagatagttacagaatgctg
ttttatttatatcacatgtccatctattgaaattatagttatacagttat
gatttaaaaatcagaaaataaagaatatttcaaaggaatataaaattgat
aatttaagataggaaatggtaacccattgtaaaccaactaattctaatgt
gagtgtgttattctataaacatcctgtttcatccagcttatttgtttagt
aatatgttctgtcaaacatgccaccacataagtgcatagagggatttcaa
tcttggctacagctggagagtctttgtaagaatgtcctactcctctctta
gagatcagtatatagattttttttccaatttcaacaattagaaccattca
gtaatctctaaaattgtgtacatgtactttataaagtatattttaaaaac
ttataatcctatgtaaagcactcataggattataaaaattgaaaataagt
ggacatgaggttgagaaaaaagggttattcagaaggaactagatagtgaa
tatgctcaaaatacattttatacttgtattcatatagaatacagaaaatg
tattttaaagtcccctgggttttaacaacagtctagagcattacgatgaa
ttcctcaaattgaattttctgaatcaaaagtaaaacatgccgggcatggt
ggcacataactttaatcccagcacttgggaggcagaggcaggtggatttc
tgggtttgaggccagcctggtctacaaagtgagttcagacagccaggact
atacagagaaccccgtcttgaaaaaacctaataataataataatataata
ataataatgataatgataataatataacaactagctatgtaactattttt
ttttgtggaatcagcaatcccatagcctcttatttcttcacaccgagtgg
gcttttcttattggttatctaacaaatgcactatagggattgagatgctc
agatagctatatccatagacctagggacaaataggttctttccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129178997_129180241
seq2: B6Ng01-279P20.g_64_1209

seq1  GAATTCTCAGGGTAACTGCAAACCAAGACCATCATTTATTTCCTCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGGTAACTGCAAACCAAGACCATCATTTATTTCCTCAGGGA  50

seq1  GTGCCAAATTTAGATACAGAATTATTTTCTATAGAAATAAAAATGTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAATTTAGATACAGAATTATTTTCTATAGAAATAAAAATGTGTGC  100

seq1  ACAAACTTTTTCTTTTTAAAGCTATGATTCTAGATAGTTACAGAATGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTTTTCTTTTTAAAGCTATGATTCTAGATAGTTACAGAATGCTG  150

seq1  TTTTATTTATATCACATGTCCATCTATTGAAATTATAGTTATACAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTATATCACATGTCCATCTATTGAAATTATAGTTATACAGTTAT  200

seq1  GATTTAAAAATCAGAAAATAAAGAATATTTCAAAGGAATATAAAATTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAAATCAGAAAATAAAGAATATTTCAAAGGAATATAAAATTGAT  250

seq1  AATTTAAGATAGGAAATGGTAACCCATTGTAAACCAACTAATTCTAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGATAGGAAATGGTAACCCATTGTAAACCAACTAATTCTAATGT  300

seq1  GAGTGTGTTATTCTATAAACATCCTGTTTCATCCAGCTTATTTGTTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTTATTCTATAAACATCCTGTTTCATCCAGCTTATTTGTTTAGT  350

seq1  AATATGTTCTGTCAAACATGCCACCACATAAGTGCATAGAGGGATTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTCTGTCAAACATGCCACCACATAAGTGCATAGAGGGATTTCAA  400

seq1  TCTTGGCTACAGCTGGAGAGTCTTTGTAAGAATGTCCTACTCCTCTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTACAGCTGGAGAGTCTTTGTAAGAATGTCCTACTCCTCTCTTA  450

seq1  GAGATCAGTATATAGATTTTTTTTCCAATTTCAACAATTAGAACCATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAGTATATAGATTTTTTTTCCAATTTCAACAATTAGAACCATTCA  500

seq1  GTAATCTCTAAAATTGTGTACATGTACTTTATAAAGTATATTTTAAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTCTAAAATTGTGTACATGTACTTTATAAAGTATATTTTAAAAAC  550

seq1  TTATAATCCTATGTAAAGCACTCATAGGATTATAAAAATTGAAAATAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCCTATGTAAAGCACTCATAGGATTATAAAAATTGAAAATAAGT  600

seq1  GGACATGAGGTTGAGAAAAAAGGGTTATTCAGAAGGAACTAGATAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGAGGTTGAGAAAAAAGGGTTATTCAGAAGGAACTAGATAGTGAA  650

seq1  TATGCTCAAAATACATTTTATACTTGTATTCATATAGAATACAGAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCAAAATACATTTTATACTTGTATTCATATAGAATACAGAAAATG  700

seq1  TATTTTAAAGTCCCCTGGGTTTTAACAACAGTCTAGAGCATTACGATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAGTCCCCTGGGTTTTAACAACAGTCTAGAGCATTACGATGAA  750

seq1  TTCCTCAAATTGAATTTTCTGAATCAAAAGTAAAACATGCCGGGCATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAATTGAATTTTCTGAATCAAAAGTAAAACATGCCGGGCATGGT  800

seq1  GGCACATAACTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATAACTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTC  850

seq1  TGGGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCAGGACAGCCAGGAC  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCA-GACAGCCAGGAC  899

seq1  TATACAGAGAAACCCCGTCTTGAAAAAAACCATAAATAAATAAATAAATA  950
      ||||||||| |||||||||||||||||| | |  |||||           
seq2  TATACAGAG-AACCCCGTCTTGAAAAAACCTAATAATAA----------T  938

seq1  AATAAATAAATAAATAAATAAATAGATAAATAGATAAATAAATAAATAAA  1000
      |||||   |||||   |||||   |||||   |||||       |||| |
seq2  AATAATATAATAA--TAATAA--TGATAA--TGATAA------TAATATA  976

seq1  ACAAACATAAGCTAATGTAAACTAATTTTTTTTGTGGGATTCAAGCAATC  1050
      |||   |  |||| |||| ||||| |||||||||||| ||   |||||||
seq2  ACA---ACTAGCT-ATGT-AACTATTTTTTTTTGTGGAAT--CAGCAATC  1019

seq1  CCCAATAG-CTCTTATTTCTCAACAACAGAGTGGGCCTTTTCTTGTTTTG  1099
      ||  |||| |||||||||||  || || ||||||| |||||||  | |||
seq2  CC--ATAGCCTCTTATTTCTTCAC-ACCGAGTGGG-CTTTTCT--TATTG  1063

seq1  TTTATCTATTAAAAATGCACTTATAGGGATTGAAAGGATGGCTCAG-TAG  1148
       |||||||  | |||||||| ||||||||||||   ||| |||||| |||
seq2  GTTATCTA--ACAAATGCAC-TATAGGGATTGA---GAT-GCTCAGATAG  1106

seq1  CTAATAATCATTAAGA-CTAGGTACAAATAGGTTCTTCCCTTGCAGAGGA  1197
      || |||  |||  ||| ||||| |||||||||||||| || ||       
seq2  CT-ATATCCAT--AGACCTAGGGACAAATAGGTTCTTTCCCTG-------  1146

seq1  TCTGATTTGTGTTCCCAGAACATACTTTTGAGGACTCACAACTCCCTG  1245
                                                      
seq2  ------------------------------------------------  1146