BAC Information

Click to search

BAC

Clone NameB6Ng01-280L23
Chromosome10 (Build37)
Map Location 127,995,392 - 127,995,829
singlet/doubletsinglet
Overlap genePa2g4
Upstream geneLrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453
Downstream geneErbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280L23.g
ACCGA080398
length432
definitionB6Ng01-280L23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agcttctagaaataggaagggcctaaacagacaccctgcctaagcaggtc
acaaggaatctgccaccacagccagccctctttgagggcagattaaatac
ttgatgacagatagggggaaacagaaaagaaaaacaaacccccccaggag
tgagaaatgctgtcagtgacaaaaaatccccagtccaggcctccatgctg
gtggataacctcacctcctttctgttttgtagttgggccacaaaccttga
ccaagcggagtagaaaaggctagaaagaggggcttgacgacggtggattt
tgactcctgattttattattcaatttcttttctactaaaagtagtcttcg
gtggctgggaagcctggcctcccaacaccagagtcagtcggagctggttt
tttgttgaaaggagtgggtgggtgggttgggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127995392_127995829
seq2: B6Ng01-280L23.g_67_504

seq1  GAATTCAGCTTCTAGAAATAGGAAGGGCCTAAACAGACACCCTGCCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTCTAGAAATAGGAAGGGCCTAAACAGACACCCTGCCTAAG  50

seq1  CAGGTCACAAGGAATCTGCCACCACAGCCAGCCCTCTTTGAGGGCAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCACAAGGAATCTGCCACCACAGCCAGCCCTCTTTGAGGGCAGATT  100

seq1  AAATACTTGATGACAGATAGGGGGAAACAGAAAAGAAAAACAAACCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTGATGACAGATAGGGGGAAACAGAAAAGAAAAACAAACCCCCC  150

seq1  CAGGAGTGAGAAATGCTGTCAGTGACAAAAAATCCCCAGTCCAGGCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTGAGAAATGCTGTCAGTGACAAAAAATCCCCAGTCCAGGCCTCC  200

seq1  ATGCTGGTGGATAACCTCACCTCCTTTCTGTTTTGTAGTTGGGCCACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTGGATAACCTCACCTCCTTTCTGTTTTGTAGTTGGGCCACAAA  250

seq1  CCTTGACCAAGCGGAGTAGAAAAGGCTAGAAAGAGGGGCTTGACGACGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACCAAGCGGAGTAGAAAAGGCTAGAAAGAGGGGCTTGACGACGGT  300

seq1  GGATTTTGACTCCTGATTTTATTATTCAATTTCTTTTCTACTAAAAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGACTCCTGATTTTATTATTCAATTTCTTTTCTACTAAAAGTAG  350

seq1  TCTTCGGTGGCTGGGAAGCCTGGCCTCCCAACACCAGAGTCAGTCGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGGTGGCTGGGAAGCCTGGCCTCCCAACACCAGAGTCAGTCGGAGC  400

seq1  TGGTTTTTTGTTGAAAGGAGTGGGTGGGTGGGTTGGGG  438
      ||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTGTTGAAAGGAGTGGGTGGGTGGGTTGGGG  438