BAC Information

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BAC

Clone NameB6Ng01-281K09
Chromosome10 (Build37)
Map Location 72,026,519 - 72,153,496
singlet/doubletdoublet
Overlap geneZwint
Upstream geneLOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
Downstream geneLOC432471, LOC544705, LOC100039981, LOC623191
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281K09.bB6Ng01-281K09.g
ACCGA081072GA081073
length5301,150
definitionB6Ng01-281K09.b B6Ng01-281K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,152,961 - 72,153,496)(72,026,519 - 72,027,662)
sequence
tctgtttatctctgtactccatttttaattgggttatttggttttctgga
gtctaagttcttgagttctttgtatatttttgataaagatcttttgaaaa
tatgaatgatttgactagttctttgtatattttggataaagatcacttct
tcctcaggtccctcaaaggaagcaccctcgctgcctcagagcactcttgt
ttgatgtagcaaatagaagctcagggaagaaagcatatagctccttctga
tcatgtagtatttgtcctcaaatcgtttaaaattcctcctctgtaaatgt
aattatattatttccaagttttaagtcctatcataaacatcattttgttg
ttttcactgtgttctttactaaaataaaatttgaggagaagctgggggag
gagtgaggaaaaagaggaggaggagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagagg
ggaggaaggaaggaaggaaggaaggaagga

gaattctctagcaaaccctaaccttactttctctctcaactctaatagca
ttttcatggcattaattttaccagtgttacattggagttaattttataca
tttcaatatttctgtttggatctcaacttcttaaagcaaggtattgttta
ttattattattattattattattattattattattattattaaagaattt
taatctcaagatctggacaaagtaattctccagtggtggatattgaatgt
ttactataaaattgtttttctataaacataaccaatttttaataatgaaa
agttaactggattactaccaaatagatttttgtagattttaaaaattatt
tttattatttgaaaatgtggcacatctatattatgtattatcatcaaaac
acttgctgtgcccccctattaccctgtataactccaatatgcaccctcct
gactttgtgtccatatttctatctgtctttacagctatatttaccattaa
atacagttagtgctgtacaaatgtacataggtgtggactcatccaataca
gcatgggaaaccaaagaacttcaggcttaaaagaaccattatgctaagca
aggtgtctccgcaggtaaaggtgcttgcgccaaacctgatgatcaaaggt
tgatccctgcaactcatatggtataaagggagagctgattcctatcagtt
gtcctctaacactcatggatatgctatactgcacacacacacacacacac
acacacacacacaatgtaaaaactaaaataatgaaagaaatatttccaaa
ttactagaatcagctatttttagctgatacctttcagtgattatcttagt
ttttgattcttttaaaaataaacacatcctgcttgcctcacaaggcagag
ttcttaatcgctgggtttcaataacagaaatagtgctaatatagaatcat
ggctgaaggagagcccactatggaggtcctctatgttttctctttgagta
tgggtcatggaagtttggttaggtcctgacattatgaagagttaaagaga
tgtcactagtagaccaaagtctggaataggttgcctaaaagaacttggat
actggtcccacttcatttctaatttacactcttaaacgcaggtgggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72152961_72153496
seq2: B6Ng01-281K09.b_47_582 (reverse)

seq1  TCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCCTCTTTCTTTCTTTCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCCTCTTTCTTTCTTTCTTTC  50

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  100

seq1  TCTTTCTCCTCCTCCTCTTTTTCCTCACTCCTCCCCCAGCTTCTCCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCCTCCTCCTCTTTTTCCTCACTCCTCCCCCAGCTTCTCCTCAA  150

seq1  ATTTTATTTTAGTAAAGAACACAGTGAAAACAACAAAATGATGTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTAGTAAAGAACACAGTGAAAACAACAAAATGATGTTTATGA  200

seq1  TAGGACTTAAAACTTGGAAATAATATAATTACATTTACAGAGGAGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTTAAAACTTGGAAATAATATAATTACATTTACAGAGGAGGAATT  250

seq1  TTAAACGATTTGAGGACAAATACTACATGATCAGAAGGAGCTATATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACGATTTGAGGACAAATACTACATGATCAGAAGGAGCTATATGCTT  300

seq1  TCTTCCCTGAGCTTCTATTTGCTACATCAAACAAGAGTGCTCTGAGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTGAGCTTCTATTTGCTACATCAAACAAGAGTGCTCTGAGGCAG  350

seq1  CGAGGGTGCTTCCTTTGAGGGACCTGAGGAAGAAGTGATCTTTATCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGGTGCTTCCTTTGAGGGACCTGAGGAAGAAGTGATCTTTATCCAAA  400

seq1  ATATACAAAGAACTAGTCAAATCATTCATATTTTCAAAAGATCTTTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAAGAACTAGTCAAATCATTCATATTTTCAAAAGATCTTTATCA  450

seq1  AAAATATACAAAGAACTCAAGAACTTAGACTCCAGAAAACCAAATAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATACAAAGAACTCAAGAACTTAGACTCCAGAAAACCAAATAACCC  500

seq1  AATTAAAAATGGAGTACAGAGATAAACAGAGAATTC  536
      ||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAATGGAGTACAGAGATAAACAGAGAATTC  536


seq1: chr10_72026519_72027662
seq2: B6Ng01-281K09.g_69_1218

seq1  GAATTCTCTAGCAAACCCTAACCTTACTTTCTCTCTCAACTCTAATAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGCAAACCCTAACCTTACTTTCTCTCTCAACTCTAATAGCA  50

seq1  TTTTCATGGCATTAATTTTACCAGTGTTACATTGGAGTTAATTTTATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGGCATTAATTTTACCAGTGTTACATTGGAGTTAATTTTATACA  100

seq1  TTTCAATATTTCTGTTTGGATCTCAACTTCTTAAAGCAAGGTATTGTTTA  150
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  TTTCAATATTTCTGTTTGGATCTCAACTTCTTAAAGCAAGGTATTGT---  147

seq1  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAAAGAA  197

seq1  TTTTAATCTCAAGATCTGGACAAAGTAATTCTCCAGTGGTGGATATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCTCAAGATCTGGACAAAGTAATTCTCCAGTGGTGGATATTGAA  247

seq1  TGTTTACTATAAAATTGTTTTTCTATAAACATAACCAATTTTTAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTATAAAATTGTTTTTCTATAAACATAACCAATTTTTAATAATG  297

seq1  AAAAGTTAACTGGATTACTACCAAATAGATTTTTGTAGATTTTAAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAACTGGATTACTACCAAATAGATTTTTGTAGATTTTAAAAATT  347

seq1  ATTTTTATTATTTGAAAATGTGGCACATCTATATTATGTATTATCATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTATTTGAAAATGTGGCACATCTATATTATGTATTATCATCAA  397

seq1  AACACTTGCTGTGCCCCCCTATTACCCTGTATAACTCCAATATGCACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGCTGTGCCCCCCTATTACCCTGTATAACTCCAATATGCACCCT  447

seq1  CCTGACTTTGTGTCCATATTTCTATCTGTCTTTACAGCTATATTTACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTTGTGTCCATATTTCTATCTGTCTTTACAGCTATATTTACCAT  497

seq1  TAAATACAGTTAGTGCTGTACAAATGTACATAGGTGTGGACTCATCCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACAGTTAGTGCTGTACAAATGTACATAGGTGTGGACTCATCCAAT  547

seq1  ACAGCATGGGAAACCAAAGAACTTCAGGCTTAAAAGAACCATTATGCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATGGGAAACCAAAGAACTTCAGGCTTAAAAGAACCATTATGCTAA  597

seq1  GCAAGGTGTCTCCGCAGGTAAAGGTGCTTGCGCCAAACCTGATGATCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTGTCTCCGCAGGTAAAGGTGCTTGCGCCAAACCTGATGATCAAA  647

seq1  GGTTGATCCCTGCAACTCATATGGTATAAAGGGAGAGCTGATTCCTATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATCCCTGCAACTCATATGGTATAAAGGGAGAGCTGATTCCTATCA  697

seq1  GTTGTCCTCTAACACTCATGGATATGCTATACTGCACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCTCTAACACTCATGGATATGCTATACTGCACACACACACACACA  747

seq1  CACACACACACACACAATGTAAAAACTAAAATAATGAAAGAAATATTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACAATGTAAAAACTAAAATAATGAAAGAAATATTTCC  797

seq1  AAATTACTAGAATCAGCTATTTTTAGCTGATACC-TTCAGTGATTATCTT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAATTACTAGAATCAGCTATTTTTAGCTGATACCTTTCAGTGATTATCTT  847

seq1  AGTTTTTGATTCTTTT-AAAATAAACACATCCTGCTTGCCTCACAAGGCA  898
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTTTTGATTCTTTTAAAAATAAACACATCCTGCTTGCCTCACAAGGCA  897

seq1  GAGTTCTTTATCGCTGGGTTTTCAAT-ACAG-AATAGTGCTAATATAGAA  946
      |||||||| ||||||||| ||||||| |||| ||||||||||||||||||
seq2  GAGTTCTTAATCGCTGGG-TTTCAATAACAGAAATAGTGCTAATATAGAA  946

seq1  TCATGGCTGAA-GAGAG-CCACTAT-GAGGTCCTCTATG-TTTCTCTTTG  992
      ||||||||||| ||||| ||||||| ||||||||||||| ||||||||||
seq2  TCATGGCTGAAGGAGAGCCCACTATGGAGGTCCTCTATGTTTTCTCTTTG  996

seq1  AGTATGGGTCATGG-AGTTTTGTTAGGTCCTGACATTAATGAGAGTTAAA  1041
      |||||||||||||| ||||| |||||||||||||||||   |||||||||
seq2  AGTATGGGTCATGGAAGTTTGGTTAGGTCCTGACATTATGAAGAGTTAAA  1046

seq1  GAGATGTCACTAGTAGACCAAAGTCTGG-ATA-GTTG-CTAAAAG-ACTT  1087
      |||||||||||||||||||||||||||| ||| |||| ||||||| ||||
seq2  GAGATGTCACTAGTAGACCAAAGTCTGGAATAGGTTGCCTAAAAGAACTT  1096

seq1  TGATACTGGGTCCACCTTGTATTTCTATTTTACACTCTAAAACCGCAGGT  1137
       ||||||||  ||||  |  ||||||| |||||||||| ||| |||||||
seq2  GGATACTGGTCCCAC--TTCATTTCTAATTTACACTCTTAAA-CGCAGGT  1143

seq1  GGGTTGG  1144
      |||||||
seq2  GGGTTGG  1150


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